RNA–Protein interactions for RNA: YLR018C

POM34, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene POM34, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
POM34YLR018C PDS5Q04264 1277 aa13.25□□□□□ -0.29
POM34YLR018C CPS1P27614 576 aa13.24□□□□□ -0.29
POM34YLR018C RTG3P38165 486 aa13.19□□□□□ -0.3
POM34YLR018C PSK1P31374 1356 aa13.18□□□□□ -0.3
POM34YLR018C FKH1P40466 484 aa13.17□□□□□ -0.3
POM34YLR018C SPT7P35177 1332 aa13.16□□□□□ -0.3
POM34YLR018C PSD2P53037 1138 aaKnown RBP13.15□□□□□ -0.3
POM34YLR018C SEC3P33332 1336 aaKnown RBP13.14□□□□□ -0.31
POM34YLR018C LEU3P08638 886 aa13.13□□□□□ -0.31
POM34YLR018C LEU2P04173 364 aaPredicted RBP13.12□□□□□ -0.31
POM34YLR018C YML133CQ03099 1374 aa13.11□□□□□ -0.31
POM34YLR018C YLL067CQ07888 1374 aa13.11□□□□□ -0.31
POM34YLR018C YLL066CQ99208 1374 aa13.11□□□□□ -0.31
POM34YLR018C NST1P53935 1240 aa13.09□□□□□ -0.31
POM34YLR018C PTP3P40048 928 aa13.07□□□□□ -0.32
POM34YLR018C MTR4P47047 1073 aaKnown RBP13.07□□□□□ -0.32
POM34YLR018C CSE4P36012 229 aa13.05□□□□□ -0.32
POM34YLR018C RPS24AP0CX31 135 aaKnown RBP13.04□□□□□ -0.32
POM34YLR018C RPS24BP0CX32 135 aaKnown RBP13.04□□□□□ -0.32
POM34YLR018C ADE6P38972 1358 aaKnown RBP13.03□□□□□ -0.32
POM34YLR018C PRP43P53131 767 aaKnown RBP13.01□□□□□ -0.33
POM34YLR018C MLP1Q02455 1875 aaKnown RBP13.01□□□□□ -0.33
POM34YLR018C PRP45P28004 379 aaPredicted RBP12.99□□□□□ -0.33
POM34YLR018C PDI1P17967 522 aaKnown RBP12.98□□□□□ -0.33
POM34YLR018C YEF3P16521 1044 aaKnown RBP12.97□□□□□ -0.33
POM34YLR018C RTF1P53064 558 aa12.97□□□□□ -0.33
POM34YLR018C PRP5P21372 849 aaPredicted RBP12.96□□□□□ -0.33
POM34YLR018C TRK1P12685 1235 aa12.95□□□□□ -0.34
POM34YLR018C ENP1P38333 483 aaKnown RBP12.95□□□□□ -0.34
POM34YLR018C GAS4Q08271 471 aa12.95□□□□□ -0.34
POM34YLR018C TAP42Q04372 366 aa12.94□□□□□ -0.34
POM34YLR018C HIM1Q06674 414 aa12.94□□□□□ -0.34
POM34YLR018C KAR2P16474 682 aaKnown RBP12.92□□□□□ -0.34
POM34YLR018C APP1P53933 587 aa12.92□□□□□ -0.34
POM34YLR018C DPS1P04802 557 aaKnown RBP12.91□□□□□ -0.34
POM34YLR018C REB1P21538 810 aa12.91□□□□□ -0.34
POM34YLR018C ENT1Q12518 454 aa12.91□□□□□ -0.34
POM34YLR018C GRX4P32642 244 aa12.9□□□□□ -0.34
POM34YLR018C NSR1P27476 414 aaKnown RBP RIP-Chip data12.89□□□□□ -0.35not detected
POM34YLR018C YAH1Q12184 172 aaKnown RBP12.89□□□□□ -0.35
POM34YLR018C TY4B-HP0C2J7 1802 aa12.89□□□□□ -0.35
POM34YLR018C TY4B-JP47024 1803 aa12.89□□□□□ -0.35
POM34YLR018C AUS1Q08409 1394 aa12.89□□□□□ -0.35
POM34YLR018C MSB3P48566 633 aaPredicted RBP12.88□□□□□ -0.35
POM34YLR018C PAP2P53632 584 aaKnown RBP12.86□□□□□ -0.35
POM34YLR018C SLM3Q12093 417 aa12.85□□□□□ -0.35
POM34YLR018C ENV9Q08651 330 aa12.84□□□□□ -0.35
POM34YLR018C RRP5Q05022 1729 aaKnown RBP12.84□□□□□ -0.35
POM34YLR018C TCB1Q12466 1186 aa12.82□□□□□ -0.36
POM34YLR018C BUB1P41695 1021 aaKnown RBP RIP-Chip data12.79□□□□□ -0.36not detected
POM34YLR018C RRP46P53256 223 aaPredicted RBP12.79□□□□□ -0.36
POM34YLR018C XKS1P42826 600 aa12.77□□□□□ -0.37
POM34YLR018C RTR1P40084 226 aaPredicted RBP12.76□□□□□ -0.37
POM34YLR018C IOC4Q04213 475 aa12.76□□□□□ -0.37
POM34YLR018C RPO41P13433 1351 aaKnown RBP12.76□□□□□ -0.37
POM34YLR018C YRF1-2P40105 1681 aa12.75□□□□□ -0.37
POM34YLR018C YDL144CQ07589 356 aa12.74□□□□□ -0.37
POM34YLR018C IES2P40154 320 aa12.73□□□□□ -0.37
POM34YLR018C IMH1Q06704 911 aaKnown RBP12.73□□□□□ -0.37
POM34YLR018C MPP10P47083 593 aaKnown RBP12.72□□□□□ -0.37
POM34YLR018C YIL177CP40434 1758 aa12.71□□□□□ -0.37
POM34YLR018C YJL225CP40889 1758 aa12.71□□□□□ -0.37
POM34YLR018C RSF2P46974 1380 aa12.71□□□□□ -0.37
POM34YLR018C PRS1P32895 427 aaKnown RBP12.71□□□□□ -0.37
POM34YLR018C AKL1P38080 1108 aaKnown RBP12.7□□□□□ -0.38
POM34YLR018C YIL055CP40523 627 aaKnown RBP12.7□□□□□ -0.38
POM34YLR018C RCR1P38212 213 aa12.69□□□□□ -0.38
POM34YLR018C DSD1P53095 428 aa12.69□□□□□ -0.38
POM34YLR018C PRD1P25375 712 aa12.68□□□□□ -0.38
POM34YLR018C RPP0P05317 312 aaKnown RBP12.66□□□□□ -0.38
POM34YLR018C HSP104P31539 908 aaKnown RBP12.66□□□□□ -0.38
POM34YLR018C SNF2P22082 1703 aa12.65□□□□□ -0.38
POM34YLR018C URB1P34241 1764 aaKnown RBP12.64□□□□□ -0.39
POM34YLR018C YKL133CP36066 463 aa12.64□□□□□ -0.39
POM34YLR018C VPS27P40343 622 aaKnown RBP12.64□□□□□ -0.39
POM34YLR018C THI22Q06490 572 aa12.64□□□□□ -0.39
POM34YLR018C FKS3Q04952 1785 aa12.64□□□□□ -0.39
POM34YLR018C YRF1-4O13559 1382 aa12.62□□□□□ -0.39
POM34YLR018C CDC45Q08032 650 aa12.62□□□□□ -0.39
POM34YLR018C APC1P53886 1748 aa12.62□□□□□ -0.39
POM34YLR018C SIR4P11978 1358 aa12.61□□□□□ -0.39
POM34YLR018C SAP155P43612 1002 aa12.61□□□□□ -0.39
POM34YLR018C SUI2P20459 304 aaKnown RBP12.6□□□□□ -0.39
POM34YLR018C TPD3P31383 635 aa12.6□□□□□ -0.39
POM34YLR018C NTH2P35172 780 aa12.6□□□□□ -0.39
POM34YLR018C DOT5P40553 215 aa12.6□□□□□ -0.39
POM34YLR018C CTF4Q01454 927 aa12.59□□□□□ -0.39
POM34YLR018C MEC3Q02574 474 aa12.59□□□□□ -0.39
POM34YLR018C RVB2Q12464 471 aaKnown RBP12.59□□□□□ -0.39
POM34YLR018C ADE16P54113 591 aaKnown RBP12.58□□□□□ -0.4
POM34YLR018C AOS1Q06624 347 aa12.58□□□□□ -0.4
POM34YLR018C RTT109Q07794 436 aa12.58□□□□□ -0.4
POM34YLR018C INP54Q08227 384 aaKnown RBP12.58□□□□□ -0.4
POM34YLR018C YNL050CP53952 270 aa12.56□□□□□ -0.4
POM34YLR018C FRK1Q03002 865 aaPredicted RBP12.56□□□□□ -0.4
POM34YLR018C ROM2P51862 1356 aaKnown RBP12.56□□□□□ -0.4
POM34YLR018C FOX2Q02207 900 aaKnown RBP12.55□□□□□ -0.4
POM34YLR018C COBP00163 385 aa12.54□□□□□ -0.4
POM34YLR018C GLN1P32288 370 aaKnown RBP12.54□□□□□ -0.4
POM34YLR018C HEF3P53978 1044 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms