RNA–Protein interactions for RNA: YKR008W

RSC4, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene RSC4, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSC4YKR008W ORC6P38826 435 aa10.61□□□□□ -0.71
RSC4YKR008W KIC1P38692 1080 aa10.6□□□□□ -0.71
RSC4YKR008W PCS60P38137 543 aaKnown RBP RIP-Chip data10.59□□□□□ -0.71not detected
RSC4YKR008W SVF1Q05515 481 aa10.59□□□□□ -0.71
RSC4YKR008W PSH1Q12161 406 aa10.59□□□□□ -0.71
RSC4YKR008W YDJ1P25491 409 aaKnown RBP10.59□□□□□ -0.71
RSC4YKR008W POL32P47110 350 aa10.59□□□□□ -0.71
RSC4YKR008W DEF1P35732 738 aaKnown RBP10.58□□□□□ -0.72
RSC4YKR008W RIM21P48565 533 aa10.58□□□□□ -0.72
RSC4YKR008W RNH70P53331 553 aa10.58□□□□□ -0.72
RSC4YKR008W HST2P53686 357 aa10.57□□□□□ -0.72
RSC4YKR008W MAG2Q06436 670 aaKnown RBP10.57□□□□□ -0.72
RSC4YKR008W BUD21Q08492 214 aaPredicted RBP10.57□□□□□ -0.72
RSC4YKR008W TRL1P09880 827 aaKnown RBP10.56□□□□□ -0.72
RSC4YKR008W NIS1P53939 407 aa10.56□□□□□ -0.72
RSC4YKR008W PKH3Q03306 898 aaPredicted RBP10.56□□□□□ -0.72
RSC4YKR008W WHI5Q12416 295 aa10.56□□□□□ -0.72
RSC4YKR008W PEP12P32854 288 aa10.55□□□□□ -0.72
RSC4YKR008W SCY1P53009 804 aa10.55□□□□□ -0.72
RSC4YKR008W FPK1P53739 893 aa10.55□□□□□ -0.72
RSC4YKR008W STB3Q12427 513 aa10.55□□□□□ -0.72
RSC4YKR008W RAD54P32863 898 aa10.54□□□□□ -0.72
RSC4YKR008W YHL050CP38721 697 aa10.54□□□□□ -0.72
RSC4YKR008W YHR219WP38900 624 aa10.54□□□□□ -0.72
RSC4YKR008W JSN1P47135 1091 aaKnown RBP RIP-Chip data10.54□□□□□ -0.72not detected
RSC4YKR008W UBX5Q06682 500 aa10.54□□□□□ -0.72
RSC4YKR008W YOL098CQ12496 1037 aa10.54□□□□□ -0.72
RSC4YKR008W YEL077CQ3E7X8 1277 aa10.54□□□□□ -0.72
RSC4YKR008W RGR1P19263 1082 aa10.53□□□□□ -0.72
RSC4YKR008W ESS1P22696 170 aa10.53□□□□□ -0.72
RSC4YKR008W RPS0AP32905 252 aaKnown RBP10.53□□□□□ -0.72
RSC4YKR008W SCJ1P25303 377 aa10.52□□□□□ -0.73
RSC4YKR008W MDJ2P42834 146 aa10.52□□□□□ -0.73
RSC4YKR008W YJU3P28321 313 aa10.51□□□□□ -0.73
RSC4YKR008W SEC8P32855 1065 aa10.51□□□□□ -0.73
RSC4YKR008W TPS3P38426 1054 aaKnown RBP10.51□□□□□ -0.73
RSC4YKR008W OYE2Q03558 400 aaKnown RBP10.51□□□□□ -0.73
RSC4YKR008W PDR1P12383 1068 aa10.5□□□□□ -0.73
RSC4YKR008W YGR273CP53329 174 aa10.5□□□□□ -0.73
RSC4YKR008W MMP1Q12372 583 aa10.5□□□□□ -0.73
RSC4YKR008W ECM23Q02710 187 aa10.49□□□□□ -0.73
RSC4YKR008W SPT5P27692 1063 aaKnown RBP10.49□□□□□ -0.73
RSC4YKR008W PPX1P38698 397 aa10.49□□□□□ -0.73
RSC4YKR008W KIP3P53086 805 aaKnown RBP10.49□□□□□ -0.73
RSC4YKR008W MAK16P10962 306 aaPredicted RBP10.47□□□□□ -0.73
RSC4YKR008W RDS2P19541 446 aaKnown RBP10.47□□□□□ -0.73
RSC4YKR008W TOM20P35180 183 aa10.47□□□□□ -0.73
RSC4YKR008W JIP5Q06214 492 aaPredicted RBP10.47□□□□□ -0.73
RSC4YKR008W CLB5P30283 435 aa10.46□□□□□ -0.74
RSC4YKR008W ZDS1P50111 915 aaKnown RBP10.46□□□□□ -0.74
RSC4YKR008W FPR3P38911 411 aaKnown RBP10.45□□□□□ -0.74
RSC4YKR008W KAR5Q04746 504 aa10.45□□□□□ -0.74
RSC4YKR008W MPP10P47083 593 aaKnown RBP10.44□□□□□ -0.74
RSC4YKR008W GRS1P38088 690 aaKnown RBP10.44□□□□□ -0.74
RSC4YKR008W MVP1P40959 511 aaKnown RBP10.44□□□□□ -0.74
RSC4YKR008W CWC15Q03772 175 aaKnown RBP10.44□□□□□ -0.74
RSC4YKR008W ARG8P18544 423 aa10.43□□□□□ -0.74
RSC4YKR008W SOL3P38858 249 aa10.43□□□□□ -0.74
RSC4YKR008W TY4A-JP47023 414 aa10.43□□□□□ -0.74
RSC4YKR008W YMR196WQ04336 1088 aa10.43□□□□□ -0.74
RSC4YKR008W YOR238WQ08634 303 aa10.43□□□□□ -0.74
RSC4YKR008W GUT1P32190 709 aa10.42□□□□□ -0.74
RSC4YKR008W ISW1P38144 1129 aa10.42□□□□□ -0.74
RSC4YKR008W RSC30P38781 883 aa10.42□□□□□ -0.74
RSC4YKR008W RPT2P40327 437 aaKnown RBP10.42□□□□□ -0.74
RSC4YKR008W YJR107WP47145 328 aa10.42□□□□□ -0.74
RSC4YKR008W NHA1Q99271 985 aa10.42□□□□□ -0.74
RSC4YKR008W CIT2P08679 460 aa10.42□□□□□ -0.74
RSC4YKR008W IOC3P43596 787 aa10.42□□□□□ -0.74
RSC4YKR008W ATH1P48016 1211 aa10.42□□□□□ -0.74
RSC4YKR008W PPG1P32838 368 aa10.41□□□□□ -0.74
RSC4YKR008W UBX7P38349 436 aa10.4□□□□□ -0.75
RSC4YKR008W KTR7P40504 517 aa10.4□□□□□ -0.75
RSC4YKR008W TSR4P25040 408 aa10.39□□□□□ -0.75
RSC4YKR008W SPT16P32558 1035 aaKnown RBP10.39□□□□□ -0.75
RSC4YKR008W RRP14P36080 434 aaKnown RBP10.39□□□□□ -0.75
RSC4YKR008W BRE1Q07457 700 aaKnown RBP10.39□□□□□ -0.75
RSC4YKR008W ALG12P53730 551 aa10.38□□□□□ -0.75
RSC4YKR008W ALD3P54114 506 aa10.38□□□□□ -0.75
RSC4YKR008W GAL2P13181 574 aa10.38□□□□□ -0.75
RSC4YKR008W MET1P36150 593 aa10.38□□□□□ -0.75
RSC4YKR008W VAC8P39968 578 aa10.38□□□□□ -0.75
RSC4YKR008W THI12P42883 340 aa10.38□□□□□ -0.75
RSC4YKR008W THI5P43534 340 aa10.38□□□□□ -0.75
RSC4YKR008W THI11P47183 340 aa10.38□□□□□ -0.75
RSC4YKR008W THI13Q07748 340 aa10.38□□□□□ -0.75
RSC4YKR008W GRE2Q12068 342 aaKnown RBP10.38□□□□□ -0.75
RSC4YKR008W GAP1P19145 602 aaPredicted RBP10.37□□□□□ -0.75
RSC4YKR008W SIT4P20604 311 aa10.36□□□□□ -0.75
RSC4YKR008W PRY3P47033 881 aa10.36□□□□□ -0.75
RSC4YKR008W HAA1Q12753 694 aaKnown RBP10.36□□□□□ -0.75
RSC4YKR008W MNL2Q12205 849 aa10.35□□□□□ -0.75
RSC4YKR008W VMA1P17255 1071 aaKnown RBP10.34□□□□□ -0.75
RSC4YKR008W SRP40P32583 406 aaPredicted RBP10.34□□□□□ -0.75
RSC4YKR008W BOL3P39724 118 aa10.34□□□□□ -0.75
RSC4YKR008W ATG1P53104 897 aa10.34□□□□□ -0.75
RSC4YKR008W RAD2P07276 1031 aa10.32□□□□□ -0.76
RSC4YKR008W MET4P32389 672 aa10.32□□□□□ -0.76
RSC4YKR008W AIM21P40563 679 aa10.32□□□□□ -0.76
RSC4YKR008W NUT2Q06213 157 aa10.32□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms