RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W CWC22P53333 577 aaKnown RBP6.2□□□□□ -1.42
ABF1YKL112W PDR5P33302 1511 aaKnown RBP6.19□□□□□ -1.42
ABF1YKL112W TYS1P36421 394 aaKnown RBP6.19□□□□□ -1.42
ABF1YKL112W SRB8P25648 1427 aa6.18□□□□□ -1.42
ABF1YKL112W SSA1P10591 642 aaKnown RBP6.17□□□□□ -1.42
ABF1YKL112W BUD31P25337 157 aaPredicted RBP6.17□□□□□ -1.42
ABF1YKL112W DMA2P53924 522 aa6.17□□□□□ -1.42
ABF1YKL112W RRP5Q05022 1729 aaKnown RBP6.16□□□□□ -1.42
ABF1YKL112W CFT1Q06632 1357 aaKnown RBP6.16□□□□□ -1.42
ABF1YKL112W REB1P21538 810 aa6.15□□□□□ -1.43
ABF1YKL112W MDG1P53885 366 aa6.15□□□□□ -1.43
ABF1YKL112W GCN2P15442 1659 aa6.14□□□□□ -1.43
ABF1YKL112W NOP2P40991 618 aaKnown RBP6.13□□□□□ -1.43
ABF1YKL112W SAS10Q12136 610 aaPredicted RBP6.12□□□□□ -1.43
ABF1YKL112W ENT1Q12518 454 aa6.11□□□□□ -1.43
ABF1YKL112W IMH1Q06704 911 aaKnown RBP6.1□□□□□ -1.43
ABF1YKL112W ENV9Q08651 330 aa6.1□□□□□ -1.43
ABF1YKL112W NUP192P47054 1683 aa6.1□□□□□ -1.43
ABF1YKL112W RLF2Q12495 606 aa6.1□□□□□ -1.43
ABF1YKL112W GTT3P39996 337 aa6.09□□□□□ -1.43
ABF1YKL112W RRD1P40454 393 aaKnown RBP6.09□□□□□ -1.43
ABF1YKL112W EDE1P34216 1381 aa6.09□□□□□ -1.43
ABF1YKL112W URB1P34241 1764 aaKnown RBP6.07□□□□□ -1.44
ABF1YKL112W YNR029CP53729 429 aaKnown RBP6.07□□□□□ -1.44
ABF1YKL112W MRPL32P25348 183 aa6.06□□□□□ -1.44
ABF1YKL112W RPL17AP05740 184 aaKnown RBP6.05□□□□□ -1.44
ABF1YKL112W UBP1P25037 809 aa6.05□□□□□ -1.44
ABF1YKL112W BRL1P38770 471 aa6.05□□□□□ -1.44
ABF1YKL112W RPL17BP46990 184 aaKnown RBP6.05□□□□□ -1.44
ABF1YKL112W RLP24Q07915 199 aaKnown RBP6.05□□□□□ -1.44
ABF1YKL112W PSH1Q12161 406 aa6.05□□□□□ -1.44
ABF1YKL112W GIN4Q12263 1142 aa6.05□□□□□ -1.44
ABF1YKL112W SWE1P32944 819 aa6.04□□□□□ -1.44
ABF1YKL112W KRE5P22023 1365 aa6.04□□□□□ -1.44
ABF1YKL112W BUD21Q08492 214 aaPredicted RBP6.04□□□□□ -1.44
ABF1YKL112W YBL086CP38177 466 aa6.03□□□□□ -1.44
ABF1YKL112W DEF1P35732 738 aaKnown RBP6.03□□□□□ -1.44
ABF1YKL112W FKS3Q04952 1785 aa6.02□□□□□ -1.45
ABF1YKL112W RIA1P53893 1110 aa6.01□□□□□ -1.45
ABF1YKL112W UGA2P38067 497 aa6.01□□□□□ -1.45
ABF1YKL112W TY4B-HP0C2J7 1802 aa6□□□□□ -1.45
ABF1YKL112W TY4B-JP47024 1803 aa6□□□□□ -1.45
ABF1YKL112W MRX12P47084 519 aa6□□□□□ -1.45
ABF1YKL112W NUG1P40010 520 aaKnown RBP5.99□□□□□ -1.45
ABF1YKL112W ATG36P46983 293 aa5.99□□□□□ -1.45
ABF1YKL112W TOA1P32773 286 aa5.97□□□□□ -1.45
ABF1YKL112W YRF1-3P0CX14 1859 aa5.97□□□□□ -1.45
ABF1YKL112W YRF1-7P0CX15 1859 aa5.97□□□□□ -1.45
ABF1YKL112W YRF1-6P53819 1859 aa5.97□□□□□ -1.45
ABF1YKL112W HIF1Q12373 385 aa5.97□□□□□ -1.45
ABF1YKL112W RPN1P38764 993 aaKnown RBP5.96□□□□□ -1.46
ABF1YKL112W TY3B-IQ7LHG5 1498 aaKnown RBP5.96□□□□□ -1.46
ABF1YKL112W TPO2P53283 614 aa5.96□□□□□ -1.46
ABF1YKL112W VPS72Q03388 795 aa5.94□□□□□ -1.46
ABF1YKL112W ALD2P47771 506 aa5.94□□□□□ -1.46
ABF1YKL112W ENV11P53246 860 aa5.94□□□□□ -1.46
ABF1YKL112W SUB1P54000 292 aaKnown RBP5.93□□□□□ -1.46
ABF1YKL112W SSA2P10592 639 aaKnown RBP5.93□□□□□ -1.46
ABF1YKL112W RPN11P43588 306 aaKnown RBP5.93□□□□□ -1.46
ABF1YKL112W SNF2P22082 1703 aa5.92□□□□□ -1.46
ABF1YKL112W LAM6Q08001 693 aa5.91□□□□□ -1.46
ABF1YKL112W NHA1Q99271 985 aa5.9□□□□□ -1.47
ABF1YKL112W ROM2P51862 1356 aaKnown RBP5.89□□□□□ -1.47
ABF1YKL112W ASF1P32447 279 aa5.89□□□□□ -1.47
ABF1YKL112W NPR2P39923 615 aa5.89□□□□□ -1.47
ABF1YKL112W TIF4632P39936 914 aaKnown RBP5.89□□□□□ -1.47
ABF1YKL112W YML020WQ03722 664 aa5.89□□□□□ -1.47
ABF1YKL112W DOT5P40553 215 aa5.88□□□□□ -1.47
ABF1YKL112W YPR148CQ06523 435 aa5.88□□□□□ -1.47
ABF1YKL112W CTH1P47976 325 aa5.87□□□□□ -1.47
ABF1YKL112W LYS4P49367 693 aaPredicted RBP5.87□□□□□ -1.47
ABF1YKL112W BRN1P38170 754 aa5.87□□□□□ -1.47
ABF1YKL112W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
ABF1YKL112W PRP45P28004 379 aaPredicted RBP5.86□□□□□ -1.47
ABF1YKL112W RTS3P53289 263 aa5.86□□□□□ -1.47
ABF1YKL112W PSK1P31374 1356 aa5.86□□□□□ -1.47
ABF1YKL112W RPS0AP32905 252 aaKnown RBP5.85□□□□□ -1.47
ABF1YKL112W ISW1P38144 1129 aa5.85□□□□□ -1.47
ABF1YKL112W YEF3P16521 1044 aaKnown RBP5.84□□□□□ -1.47
ABF1YKL112W NOP8Q08287 484 aaPredicted RBP5.84□□□□□ -1.47
ABF1YKL112W OSW7P43611 510 aa5.84□□□□□ -1.47
ABF1YKL112W SPT16P32558 1035 aaKnown RBP5.83□□□□□ -1.48
ABF1YKL112W YGL015CP33199 130 aa5.83□□□□□ -1.48
ABF1YKL112W FOX2Q02207 900 aaKnown RBP5.83□□□□□ -1.48
ABF1YKL112W TLG1Q03322 224 aa5.83□□□□□ -1.48
ABF1YKL112W RAD9P14737 1309 aa5.83□□□□□ -1.48
ABF1YKL112W SPT21P35209 758 aa5.83□□□□□ -1.48
ABF1YKL112W ALD4P46367 519 aaKnown RBP5.82□□□□□ -1.48
ABF1YKL112W YJL181WP46987 611 aa5.82□□□□□ -1.48
ABF1YKL112W SPT2P06843 333 aaPredicted RBP5.82□□□□□ -1.48
ABF1YKL112W IES2P40154 320 aa5.82□□□□□ -1.48
ABF1YKL112W MPP10P47083 593 aaKnown RBP5.82□□□□□ -1.48
ABF1YKL112W NOP7P53261 605 aaKnown RBP5.82□□□□□ -1.48
ABF1YKL112W FAR11P53917 953 aa5.82□□□□□ -1.48
ABF1YKL112W CAB1Q04430 367 aa5.82□□□□□ -1.48
ABF1YKL112W RSF2P46974 1380 aa5.81□□□□□ -1.48
ABF1YKL112W RAV1P47104 1357 aa5.81□□□□□ -1.48
ABF1YKL112W PRP5P21372 849 aaPredicted RBP5.81□□□□□ -1.48
ABF1YKL112W PLP2Q12017 286 aa5.81□□□□□ -1.48
ABF1YKL112W YJR008WP47085 338 aa5.8□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms