RNA–Protein interactions for RNA: YKL058W

TOA2, Transcript of TFIIA small subunit, yeast

Gene TOA2, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOA2	YKL058W	YML133C	Q03099	1374 aa		12.3	□□□□□ -0.44
TOA2	YKL058W	YLL067C	Q07888	1374 aa		12.3	□□□□□ -0.44
TOA2	YKL058W	YLL066C	Q99208	1374 aa		12.3	□□□□□ -0.44
TOA2	YKL058W	RTG3	P38165	486 aa		12.3	□□□□□ -0.44
TOA2	YKL058W	RCM1	P53972	490 aa		12.29	□□□□□ -0.44
TOA2	YKL058W	USO1	P25386	1790 aa		12.28	□□□□□ -0.44
TOA2	YKL058W	IOC4	Q04213	475 aa		12.28	□□□□□ -0.44
TOA2	YKL058W	CPS1	P27614	576 aa		12.27	□□□□□ -0.45
TOA2	YKL058W	PPH3	P32345	308 aa		12.27	□□□□□ -0.45
TOA2	YKL058W	NST1	P53935	1240 aa		12.26	□□□□□ -0.45
TOA2	YKL058W	LEU3	P08638	886 aa		12.25	□□□□□ -0.45
TOA2	YKL058W	MIF2	P35201	549 aa		12.22	□□□□□ -0.45
TOA2	YKL058W	LEU2	P04173	364 aa	Predicted RBP	12.2	□□□□□ -0.46
TOA2	YKL058W	PRS1	P32895	427 aa	Known RBP	12.2	□□□□□ -0.46
TOA2	YKL058W	MTR4	P47047	1073 aa	Known RBP	12.19	□□□□□ -0.46
TOA2	YKL058W	YEF3	P16521	1044 aa	Known RBP	12.18	□□□□□ -0.46
TOA2	YKL058W	TAP42	Q04372	366 aa		12.18	□□□□□ -0.46
TOA2	YKL058W	ADE6	P38972	1358 aa	Known RBP	12.18	□□□□□ -0.46
TOA2	YKL058W	THI12	P42883	340 aa		12.16	□□□□□ -0.46
TOA2	YKL058W	THI5	P43534	340 aa		12.16	□□□□□ -0.46
TOA2	YKL058W	THI11	P47183	340 aa		12.16	□□□□□ -0.46
TOA2	YKL058W	PRP43	P53131	767 aa	Known RBP	12.16	□□□□□ -0.46
TOA2	YKL058W	THI13	Q07748	340 aa		12.16	□□□□□ -0.46
TOA2	YKL058W	PDI1	P17967	522 aa	Known RBP	12.14	□□□□□ -0.47
TOA2	YKL058W	RPP0	P05317	312 aa	Known RBP	12.13	□□□□□ -0.47
TOA2	YKL058W	TRK1	P12685	1235 aa		12.12	□□□□□ -0.47
TOA2	YKL058W	GRX4	P32642	244 aa		12.11	□□□□□ -0.47
TOA2	YKL058W	RTF1	P53064	558 aa		12.09	□□□□□ -0.47
TOA2	YKL058W	AUS1	Q08409	1394 aa		12.08	□□□□□ -0.48
TOA2	YKL058W	KAR2	P16474	682 aa	Known RBP	12.06	□□□□□ -0.48
TOA2	YKL058W	VPS27	P40343	622 aa	Known RBP	12.04	□□□□□ -0.48
TOA2	YKL058W	RPS24A	P0CX31	135 aa	Known RBP	12.03	□□□□□ -0.48
TOA2	YKL058W	RPS24B	P0CX32	135 aa	Known RBP	12.03	□□□□□ -0.48
TOA2	YKL058W	CSE4	P36012	229 aa		12.03	□□□□□ -0.48
TOA2	YKL058W	CDC45	Q08032	650 aa		12.03	□□□□□ -0.48
TOA2	YKL058W	SNF2	P22082	1703 aa		12.03	□□□□□ -0.48
TOA2	YKL058W	RRP46	P53256	223 aa	Predicted RBP	12.02	□□□□□ -0.49
TOA2	YKL058W	HIM1	Q06674	414 aa		12.02	□□□□□ -0.49
TOA2	YKL058W	YDL144C	Q07589	356 aa		12.01	□□□□□ -0.49
TOA2	YKL058W	RPO41	P13433	1351 aa	Known RBP	12	□□□□□ -0.49
TOA2	YKL058W	TY4B-H	P0C2J7	1802 aa		12	□□□□□ -0.49
TOA2	YKL058W	TY4B-J	P47024	1803 aa		12	□□□□□ -0.49
TOA2	YKL058W	PTP3	P40048	928 aa		11.98	□□□□□ -0.49
TOA2	YKL058W	YRB30	P53107	440 aa	Predicted RBP	11.98	□□□□□ -0.49
TOA2	YKL058W	RTR1	P40084	226 aa	Predicted RBP	11.97	□□□□□ -0.49
TOA2	YKL058W	NOP2	P40991	618 aa	Known RBP	11.97	□□□□□ -0.49
TOA2	YKL058W	DPS1	P04802	557 aa	Known RBP	11.94	□□□□□ -0.5
TOA2	YKL058W	MPP10	P47083	593 aa	Known RBP	11.94	□□□□□ -0.5
TOA2	YKL058W	PAP2	P53632	584 aa	Known RBP	11.94	□□□□□ -0.5
TOA2	YKL058W	GAS4	Q08271	471 aa		11.94	□□□□□ -0.5
TOA2	YKL058W	YRF1-2	P40105	1681 aa		11.94	□□□□□ -0.5
TOA2	YKL058W	PRD1	P25375	712 aa		11.93	□□□□□ -0.5
TOA2	YKL058W	APC1	P53886	1748 aa		11.92	□□□□□ -0.5
TOA2	YKL058W	PRP5	P21372	849 aa	Predicted RBP	11.92	□□□□□ -0.5
TOA2	YKL058W	RVB2	Q12464	471 aa	Known RBP	11.92	□□□□□ -0.5
TOA2	YKL058W	SUI2	P20459	304 aa	Known RBP	11.91	□□□□□ -0.5
TOA2	YKL058W	RRP5	Q05022	1729 aa	Known RBP	11.89	□□□□□ -0.51
TOA2	YKL058W	PRP45	P28004	379 aa	Predicted RBP	11.88	□□□□□ -0.51
TOA2	YKL058W	THI22	Q06490	572 aa		11.88	□□□□□ -0.51
TOA2	YKL058W	SLM3	Q12093	417 aa		11.88	□□□□□ -0.51
TOA2	YKL058W	YRF1-4	O13559	1382 aa		11.88	□□□□□ -0.51
TOA2	YKL058W	YIL177C	P40434	1758 aa		11.87	□□□□□ -0.51
TOA2	YKL058W	YJL225C	P40889	1758 aa		11.87	□□□□□ -0.51
TOA2	YKL058W	AKL1	P38080	1108 aa	Known RBP	11.86	□□□□□ -0.51
TOA2	YKL058W	YFR006W	P43590	535 aa		11.86	□□□□□ -0.51
TOA2	YKL058W	SAP155	P43612	1002 aa		11.86	□□□□□ -0.51
TOA2	YKL058W	HEF3	P53978	1044 aa	Known RBP	11.85	□□□□□ -0.51
TOA2	YKL058W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.85	□□□□□ -0.51	not detected
TOA2	YKL058W	MSB3	P48566	633 aa	Predicted RBP	11.84	□□□□□ -0.51
TOA2	YKL058W	SIR4	P11978	1358 aa		11.83	□□□□□ -0.52
TOA2	YKL058W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.83	□□□□□ -0.52	not detected
TOA2	YKL058W	DSD1	P53095	428 aa		11.83	□□□□□ -0.52
TOA2	YKL058W	TPD3	P31383	635 aa		11.81	□□□□□ -0.52
TOA2	YKL058W	CTF4	Q01454	927 aa		11.81	□□□□□ -0.52
TOA2	YKL058W	FKS3	Q04952	1785 aa		11.81	□□□□□ -0.52
TOA2	YKL058W	URB1	P34241	1764 aa	Known RBP	11.8	□□□□□ -0.52
TOA2	YKL058W	YNL050C	P53952	270 aa		11.8	□□□□□ -0.52
TOA2	YKL058W	TCB1	Q12466	1186 aa		11.8	□□□□□ -0.52
TOA2	YKL058W	RTT109	Q07794	436 aa		11.79	□□□□□ -0.52
TOA2	YKL058W	RSF2	P46974	1380 aa		11.79	□□□□□ -0.52
TOA2	YKL058W	NTH2	P35172	780 aa		11.78	□□□□□ -0.52
TOA2	YKL058W	YAH1	Q12184	172 aa	Known RBP	11.76	□□□□□ -0.53
TOA2	YKL058W	REB1	P21538	810 aa		11.75	□□□□□ -0.53
TOA2	YKL058W	MAM1	P40065	302 aa		11.75	□□□□□ -0.53
TOA2	YKL058W	XKS1	P42826	600 aa		11.75	□□□□□ -0.53
TOA2	YKL058W	TFA1	P36100	482 aa		11.74	□□□□□ -0.53
TOA2	YKL058W	YFR016C	P43597	1233 aa	Known RBP	11.74	□□□□□ -0.53
TOA2	YKL058W	HSP104	P31539	908 aa	Known RBP	11.73	□□□□□ -0.53
TOA2	YKL058W	RCR1	P38212	213 aa		11.73	□□□□□ -0.53
TOA2	YKL058W	FUN12	P39730	1002 aa	Known RBP	11.73	□□□□□ -0.53
TOA2	YKL058W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	11.73	□□□□□ -0.53	not detected
TOA2	YKL058W	AOS1	Q06624	347 aa		11.73	□□□□□ -0.53
TOA2	YKL058W	ENT1	Q12518	454 aa		11.73	□□□□□ -0.53
TOA2	YKL058W	EDE1	P34216	1381 aa		11.72	□□□□□ -0.53
TOA2	YKL058W	RAD2	P07276	1031 aa		11.72	□□□□□ -0.53
TOA2	YKL058W	GYP7	P48365	746 aa		11.72	□□□□□ -0.53
TOA2	YKL058W	ZDS1	P50111	915 aa	Known RBP	11.72	□□□□□ -0.53
TOA2	YKL058W	MAK21	Q12176	1025 aa	Known RBP	11.72	□□□□□ -0.53
TOA2	YKL058W	YIL092W	P40497	633 aa		11.71	□□□□□ -0.53
TOA2	YKL058W	FPR3	P38911	411 aa	Known RBP	11.69	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms