RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD2YKL027W CHZ1P40019 153 aaPredicted RBP15.74■□□□□ 0.11
TCD2YKL027W PTP3P40048 928 aa15.74■□□□□ 0.11
TCD2YKL027W MHP1P43638 1398 aa15.7■□□□□ 0.1
TCD2YKL027W MLP1Q02455 1875 aaKnown RBP15.63■□□□□ 0.09
TCD2YKL027W YAH1Q12184 172 aaKnown RBP15.63■□□□□ 0.09
TCD2YKL027W ADE6P38972 1358 aaKnown RBP15.62■□□□□ 0.09
TCD2YKL027W LEU2P04173 364 aaPredicted RBP15.61■□□□□ 0.09
TCD2YKL027W MTR4P47047 1073 aaKnown RBP15.6■□□□□ 0.09
TCD2YKL027W TY4B-HP0C2J7 1802 aa15.6■□□□□ 0.09
TCD2YKL027W TY4B-JP47024 1803 aa15.6■□□□□ 0.09
TCD2YKL027W FKH1P40466 484 aa15.58■□□□□ 0.08
TCD2YKL027W YML133CQ03099 1374 aa15.57■□□□□ 0.08
TCD2YKL027W YLL067CQ07888 1374 aa15.57■□□□□ 0.08
TCD2YKL027W YLL066CQ99208 1374 aa15.57■□□□□ 0.08
TCD2YKL027W PDS5Q04264 1277 aa15.57■□□□□ 0.08
TCD2YKL027W RRP5Q05022 1729 aaKnown RBP15.57■□□□□ 0.08
TCD2YKL027W PRP43P53131 767 aaKnown RBP15.54■□□□□ 0.08
TCD2YKL027W PRP45P28004 379 aaPredicted RBP15.51■□□□□ 0.07
TCD2YKL027W RTG3P38165 486 aa15.51■□□□□ 0.07
TCD2YKL027W REB1P21538 810 aa15.5■□□□□ 0.07
TCD2YKL027W APP1P53933 587 aa15.5■□□□□ 0.07
TCD2YKL027W PRP5P21372 849 aaPredicted RBP15.48■□□□□ 0.07
TCD2YKL027W CSE4P36012 229 aa15.48■□□□□ 0.07
TCD2YKL027W ENT1Q12518 454 aa15.48■□□□□ 0.07
TCD2YKL027W RPS24AP0CX31 135 aaKnown RBP15.45■□□□□ 0.06
TCD2YKL027W RPS24BP0CX32 135 aaKnown RBP15.45■□□□□ 0.06
TCD2YKL027W YRF1-2P40105 1681 aa15.44■□□□□ 0.06
TCD2YKL027W SEC3P33332 1336 aaKnown RBP15.44■□□□□ 0.06
TCD2YKL027W PDI1P17967 522 aaKnown RBP15.43■□□□□ 0.06
TCD2YKL027W RTF1P53064 558 aa15.42■□□□□ 0.06
TCD2YKL027W ENV9Q08651 330 aa15.42■□□□□ 0.06
TCD2YKL027W TAP42Q04372 366 aa15.4■□□□□ 0.06
TCD2YKL027W MSB3P48566 633 aaPredicted RBP15.39■□□□□ 0.05
TCD2YKL027W GRX4P32642 244 aa15.36■□□□□ 0.05
TCD2YKL027W SLM3Q12093 417 aa15.36■□□□□ 0.05
TCD2YKL027W YIL055CP40523 627 aaKnown RBP15.35■□□□□ 0.05
TCD2YKL027W IMH1Q06704 911 aaKnown RBP15.34■□□□□ 0.05
TCD2YKL027W TCB1Q12466 1186 aa15.33■□□□□ 0.04
TCD2YKL027W PSD2P53037 1138 aaKnown RBP15.32■□□□□ 0.04
TCD2YKL027W YIL177CP40434 1758 aa15.32■□□□□ 0.04
TCD2YKL027W YJL225CP40889 1758 aa15.32■□□□□ 0.04
TCD2YKL027W DPS1P04802 557 aaKnown RBP15.31■□□□□ 0.04
TCD2YKL027W AUS1Q08409 1394 aa15.3■□□□□ 0.04
TCD2YKL027W GAS4Q08271 471 aa15.3■□□□□ 0.04
TCD2YKL027W RSF2P46974 1380 aa15.28■□□□□ 0.04
TCD2YKL027W SPT7P35177 1332 aa15.28■□□□□ 0.04
TCD2YKL027W FKS3Q04952 1785 aa15.28■□□□□ 0.04
TCD2YKL027W KAR2P16474 682 aaKnown RBP15.27■□□□□ 0.04
TCD2YKL027W NST1P53935 1240 aa15.27■□□□□ 0.04
TCD2YKL027W YEF3P16521 1044 aaKnown RBP15.26■□□□□ 0.03
TCD2YKL027W HIM1Q06674 414 aa15.26■□□□□ 0.03
TCD2YKL027W URB1P34241 1764 aaKnown RBP15.25■□□□□ 0.03
TCD2YKL027W IES2P40154 320 aa15.23■□□□□ 0.03
TCD2YKL027W APC1P53886 1748 aa15.23■□□□□ 0.03
TCD2YKL027W XKS1P42826 600 aa15.21■□□□□ 0.03
TCD2YKL027W TRK1P12685 1235 aa15.2■□□□□ 0.02
TCD2YKL027W RPO41P13433 1351 aaKnown RBP15.2■□□□□ 0.02
TCD2YKL027W ENP1P38333 483 aaKnown RBP15.19■□□□□ 0.02
TCD2YKL027W YRF1-3P0CX14 1859 aa15.19■□□□□ 0.02
TCD2YKL027W YRF1-7P0CX15 1859 aa15.19■□□□□ 0.02
TCD2YKL027W YRF1-6P53819 1859 aa15.19■□□□□ 0.02
TCD2YKL027W LEU3P08638 886 aa15.18■□□□□ 0.02
TCD2YKL027W GLN1P32288 370 aaKnown RBP15.18■□□□□ 0.02
TCD2YKL027W ROM2P51862 1356 aaKnown RBP15.17■□□□□ 0.02
TCD2YKL027W IOC4Q04213 475 aa15.16■□□□□ 0.02
TCD2YKL027W YMR074CQ04773 145 aa15.16■□□□□ 0.02
TCD2YKL027W PAP2P53632 584 aaKnown RBP15.15■□□□□ 0.02
TCD2YKL027W SIR4P11978 1358 aa15.13■□□□□ 0.01
TCD2YKL027W YKL133CP36066 463 aa15.11■□□□□ 0.01
TCD2YKL027W RCR1P38212 213 aa15.1■□□□□ 0.01
TCD2YKL027W DOT5P40553 215 aa15.09■□□□□ 0.01
TCD2YKL027W MEC3Q02574 474 aa15.09■□□□□ 0.01
TCD2YKL027W BUB1P41695 1021 aaKnown RBP RIP-Chip data15.08■□□□□ 0not detected
TCD2YKL027W SNF2P22082 1703 aa15.07■□□□□ 0
TCD2YKL027W DSD1P53095 428 aa15.05■□□□□ -0
TCD2YKL027W EDE1P34216 1381 aa15.04■□□□□ -0
TCD2YKL027W AKL1P38080 1108 aaKnown RBP15.04■□□□□ -0
TCD2YKL027W FOX2Q02207 900 aaKnown RBP15.04■□□□□ -0
TCD2YKL027W RRP46P53256 223 aaPredicted RBP15.03■□□□□ -0
TCD2YKL027W CTF4Q01454 927 aa15.03■□□□□ -0
TCD2YKL027W YRF1-4O13559 1382 aa15.02□□□□□ -0.01
TCD2YKL027W HSP104P31539 908 aaKnown RBP14.99□□□□□ -0.01
TCD2YKL027W RTR1P40084 226 aaPredicted RBP14.99□□□□□ -0.01
TCD2YKL027W ADE16P54113 591 aaKnown RBP14.99□□□□□ -0.01
TCD2YKL027W RPN11P43588 306 aaKnown RBP14.98□□□□□ -0.01
TCD2YKL027W LAM6Q08001 693 aa14.98□□□□□ -0.01
TCD2YKL027W COBP00163 385 aa14.97□□□□□ -0.01
TCD2YKL027W UBP1P25037 809 aa14.97□□□□□ -0.01
TCD2YKL027W BUD31P25337 157 aaPredicted RBP14.97□□□□□ -0.01
TCD2YKL027W FRK1Q03002 865 aaPredicted RBP14.96□□□□□ -0.01
TCD2YKL027W INP54Q08227 384 aaKnown RBP14.96□□□□□ -0.01
TCD2YKL027W YJL181WP46987 611 aa14.95□□□□□ -0.02
TCD2YKL027W PRP40P33203 583 aaKnown RBP14.94□□□□□ -0.02
TCD2YKL027W AOS1Q06624 347 aa14.94□□□□□ -0.02
TCD2YKL027W PRD1P25375 712 aa14.93□□□□□ -0.02
TCD2YKL027W YKR075CP36155 307 aa14.93□□□□□ -0.02
TCD2YKL027W ATG13Q06628 738 aa14.93□□□□□ -0.02
TCD2YKL027W PRI1P10363 409 aa14.92□□□□□ -0.02
TCD2YKL027W NTH2P35172 780 aa14.92□□□□□ -0.02
TCD2YKL027W YDL144CQ07589 356 aa14.92□□□□□ -0.02
Retrieved 100 of 5,963 RNA–protein pairs in 90.2 ms