RNA–Protein interactions for RNA: YJL164C

TPK1, Transcript of cAMP-dependent protein kinase catalytic subunit, yeastyeast

Gene TPK1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPK1YJL164C NNF2P53253 936 aa7.86□□□□□ -1.15
TPK1YJL164C XRN1P22147 1528 aaKnown RBP7.86□□□□□ -1.15
TPK1YJL164C RPC31P17890 251 aa7.85□□□□□ -1.15
TPK1YJL164C TAN1P53072 289 aaPredicted RBP7.85□□□□□ -1.15
TPK1YJL164C BNI4P53858 892 aa7.85□□□□□ -1.15
TPK1YJL164C TOP2P06786 1428 aaKnown RBP7.85□□□□□ -1.15
TPK1YJL164C IKI3Q06706 1349 aaKnown RBP7.84□□□□□ -1.15
TPK1YJL164C MPH3P0CE00 602 aa7.84□□□□□ -1.15
TPK1YJL164C YML082WQ04533 649 aaKnown RBP7.84□□□□□ -1.15
TPK1YJL164C RAS1P01119 309 aa7.83□□□□□ -1.16
TPK1YJL164C VPS4P52917 437 aa7.83□□□□□ -1.16
TPK1YJL164C SNU71P53207 620 aaKnown RBP7.83□□□□□ -1.16
TPK1YJL164C AI4P03878 556 aa7.82□□□□□ -1.16
TPK1YJL164C LTV1P34078 463 aa7.82□□□□□ -1.16
TPK1YJL164C PET111P08468 800 aa7.8□□□□□ -1.16
TPK1YJL164C MAK11P20484 414 aaKnown RBP7.8□□□□□ -1.16
TPK1YJL164C PTC2P39966 464 aaKnown RBP7.8□□□□□ -1.16
TPK1YJL164C ROX1P25042 368 aa7.79□□□□□ -1.16
TPK1YJL164C PRP3Q03338 469 aaPredicted RBP7.79□□□□□ -1.16
TPK1YJL164C YSH1Q06224 779 aaPredicted RBP7.79□□□□□ -1.16
TPK1YJL164C PEP1P32319 1579 aa7.77□□□□□ -1.17
TPK1YJL164C RAM2P29703 316 aa7.77□□□□□ -1.17
TPK1YJL164C MPC54Q08550 464 aa7.77□□□□□ -1.17
TPK1YJL164C CHZ1P40019 153 aaPredicted RBP7.76□□□□□ -1.17
TPK1YJL164C DOS2P54858 310 aa7.76□□□□□ -1.17
TPK1YJL164C BUD4P47136 1447 aa7.76□□□□□ -1.17
TPK1YJL164C MMS1Q06211 1407 aa7.76□□□□□ -1.17
TPK1YJL164C MON2P48563 1636 aaPredicted RBP7.75□□□□□ -1.17
TPK1YJL164C SRB8P25648 1427 aa7.75□□□□□ -1.17
TPK1YJL164C BYE1P36106 594 aa7.74□□□□□ -1.17
TPK1YJL164C DSN1P40568 576 aa7.74□□□□□ -1.17
TPK1YJL164C SMC4Q12267 1418 aa7.73□□□□□ -1.17
TPK1YJL164C RAD26P40352 1085 aa7.73□□□□□ -1.17
TPK1YJL164C YIR014WP40570 242 aa7.73□□□□□ -1.17
TPK1YJL164C YPR015CQ12531 247 aa7.73□□□□□ -1.17
TPK1YJL164C TRM732Q03496 1420 aa7.72□□□□□ -1.17
TPK1YJL164C NOT3P06102 836 aaKnown RBP7.72□□□□□ -1.17
TPK1YJL164C CTR9P89105 1077 aa7.72□□□□□ -1.17
TPK1YJL164C COQ8P27697 501 aa7.71□□□□□ -1.18
TPK1YJL164C NAB3P38996 802 aaKnown RBP RIP-Chip data7.71□□□□□ -1.18not detected
TPK1YJL164C NOP8Q08287 484 aaPredicted RBP7.71□□□□□ -1.18
TPK1YJL164C ETT1Q08421 412 aaKnown RBP7.71□□□□□ -1.18
TPK1YJL164C HIF1Q12373 385 aa7.71□□□□□ -1.18
TPK1YJL164C EDE1P34216 1381 aa7.71□□□□□ -1.18
TPK1YJL164C CFT1Q06632 1357 aaKnown RBP7.71□□□□□ -1.18
TPK1YJL164C MYO4P32492 1471 aa7.7□□□□□ -1.18
TPK1YJL164C SRP54P20424 541 aaKnown RBP7.7□□□□□ -1.18
TPK1YJL164C MSH3P25336 1018 aa7.7□□□□□ -1.18
TPK1YJL164C YMR124WP39523 943 aaKnown RBP7.7□□□□□ -1.18
TPK1YJL164C NMA111P53920 997 aa7.7□□□□□ -1.18
TPK1YJL164C IFH1P39520 1085 aa7.69□□□□□ -1.18
TPK1YJL164C RPN7Q06103 429 aaKnown RBP7.69□□□□□ -1.18
TPK1YJL164C SWI3P32591 825 aa7.68□□□□□ -1.18
TPK1YJL164C TOA1P32773 286 aa7.68□□□□□ -1.18
TPK1YJL164C TCD1P38756 429 aa7.68□□□□□ -1.18
TPK1YJL164C SLN1P39928 1220 aaPredicted RBP7.68□□□□□ -1.18
TPK1YJL164C YPP1P46951 817 aa7.68□□□□□ -1.18
TPK1YJL164C MDG1P53885 366 aa7.68□□□□□ -1.18
TPK1YJL164C TLG1Q03322 224 aa7.68□□□□□ -1.18
TPK1YJL164C GRX3Q03835 250 aa7.68□□□□□ -1.18
TPK1YJL164C YLR419WQ06698 1435 aaKnown RBP7.68□□□□□ -1.18
TPK1YJL164C HSC82P15108 705 aaKnown RBP7.67□□□□□ -1.18
TPK1YJL164C RNT1Q02555 471 aa7.67□□□□□ -1.18
TPK1YJL164C YVC1Q12324 675 aa7.67□□□□□ -1.18
TPK1YJL164C SIC1P38634 284 aa7.65□□□□□ -1.18
TPK1YJL164C TPM2P40414 161 aa7.65□□□□□ -1.18
TPK1YJL164C YGR273CP53329 174 aa7.65□□□□□ -1.18
TPK1YJL164C THO2P53552 1597 aaKnown RBP7.65□□□□□ -1.18
TPK1YJL164C ESC2Q06340 456 aa7.65□□□□□ -1.18
TPK1YJL164C IRC20Q06554 1556 aa7.65□□□□□ -1.18
TPK1YJL164C VPS24P36095 224 aaKnown RBP7.64□□□□□ -1.19
TPK1YJL164C RRP15Q06511 250 aaPredicted RBP7.64□□□□□ -1.19
TPK1YJL164C RAM1P22007 431 aa7.63□□□□□ -1.19
TPK1YJL164C CDC11P32458 415 aa7.63□□□□□ -1.19
TPK1YJL164C SLI15P38283 698 aa7.63□□□□□ -1.19
TPK1YJL164C NOP56Q12460 504 aaKnown RBP RIP-Chip data7.63□□□□□ -1.19not detected
TPK1YJL164C YPK9Q12697 1472 aa7.62□□□□□ -1.19
TPK1YJL164C TRK1P12685 1235 aa7.62□□□□□ -1.19
TPK1YJL164C CLB1P24868 471 aa7.62□□□□□ -1.19
TPK1YJL164C VPS30Q02948 557 aa7.62□□□□□ -1.19
TPK1YJL164C VPS60Q03390 229 aa7.62□□□□□ -1.19
TPK1YJL164C SPT16P32558 1035 aaKnown RBP7.61□□□□□ -1.19
TPK1YJL164C APL5Q08951 932 aaKnown RBP7.61□□□□□ -1.19
TPK1YJL164C NHA1Q99271 985 aa7.61□□□□□ -1.19
TPK1YJL164C AMS1P22855 1083 aa7.6□□□□□ -1.19
TPK1YJL164C CLB5P30283 435 aa7.6□□□□□ -1.19
TPK1YJL164C DEP1P31385 405 aa7.6□□□□□ -1.19
TPK1YJL164C RRP14P36080 434 aaKnown RBP7.6□□□□□ -1.19
TPK1YJL164C RTT106P40161 455 aa7.6□□□□□ -1.19
TPK1YJL164C SUB1P54000 292 aaKnown RBP7.6□□□□□ -1.19
TPK1YJL164C ECM16Q04217 1267 aaKnown RBP7.6□□□□□ -1.19
TPK1YJL164C DPL1Q05567 589 aa7.6□□□□□ -1.19
TPK1YJL164C NOP14Q99207 810 aaKnown RBP7.6□□□□□ -1.19
TPK1YJL164C RAD9P14737 1309 aa7.59□□□□□ -1.19
TPK1YJL164C ZUO1P32527 433 aaKnown RBP7.59□□□□□ -1.19
TPK1YJL164C SWE1P32944 819 aa7.59□□□□□ -1.19
TPK1YJL164C SAP190P36123 1033 aa7.59□□□□□ -1.19
TPK1YJL164C MDM38Q08179 573 aa7.59□□□□□ -1.19
TPK1YJL164C PDR10P51533 1564 aa7.59□□□□□ -1.2
TPK1YJL164C LEU3P08638 886 aa7.58□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms