RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C RAD59Q12223 238 aa3.76□□□□□ -1.81
VPS35YJL154C NUD1P32336 851 aa3.76□□□□□ -1.81
VPS35YJL154C BIM1P40013 344 aa3.76□□□□□ -1.81
VPS35YJL154C YNL115CP53925 644 aa3.76□□□□□ -1.81
VPS35YJL154C BUD31P25337 157 aaPredicted RBP3.75□□□□□ -1.81
VPS35YJL154C YJL171CP46992 396 aa3.75□□□□□ -1.81
VPS35YJL154C RTF1P53064 558 aa3.75□□□□□ -1.81
VPS35YJL154C SIT4P20604 311 aa3.74□□□□□ -1.81
VPS35YJL154C FKH1P40466 484 aa3.74□□□□□ -1.81
VPS35YJL154C LAM6Q08001 693 aa3.74□□□□□ -1.81
VPS35YJL154C YJU3P28321 313 aa3.74□□□□□ -1.81
VPS35YJL154C KEX2P13134 814 aa3.73□□□□□ -1.81
VPS35YJL154C GCD11P32481 527 aaKnown RBP3.73□□□□□ -1.81
VPS35YJL154C CSE4P36012 229 aa3.73□□□□□ -1.81
VPS35YJL154C SIS1P25294 352 aaKnown RBP3.73□□□□□ -1.81
VPS35YJL154C ATG32P40458 529 aa3.73□□□□□ -1.81
VPS35YJL154C ARH1P48360 493 aa3.73□□□□□ -1.81
VPS35YJL154C PDR1P12383 1068 aa3.72□□□□□ -1.81
VPS35YJL154C PTC2P39966 464 aaKnown RBP3.72□□□□□ -1.81
VPS35YJL154C YPR204WQ08995 1032 aa3.72□□□□□ -1.81
VPS35YJL154C PAT1P25644 796 aaKnown RBP3.71□□□□□ -1.81
VPS35YJL154C SPT23P35210 1082 aa3.71□□□□□ -1.81
VPS35YJL154C PUS6P53294 404 aa3.71□□□□□ -1.81
VPS35YJL154C YNL108CP53929 270 aa3.71□□□□□ -1.81
VPS35YJL154C BMT6Q12291 365 aa3.71□□□□□ -1.81
VPS35YJL154C TRM1P15565 570 aaKnown RBP3.71□□□□□ -1.82
VPS35YJL154C RTG2P32608 588 aaKnown RBP3.71□□□□□ -1.82
VPS35YJL154C TIF1P10081 395 aaKnown RBP3.71□□□□□ -1.82
VPS35YJL154C SPT5P27692 1063 aaKnown RBP3.71□□□□□ -1.82
VPS35YJL154C BNI4P53858 892 aa3.71□□□□□ -1.82
VPS35YJL154C SSA4P22202 642 aaKnown RBP3.7□□□□□ -1.82
VPS35YJL154C BIO2P32451 375 aa3.7□□□□□ -1.82
VPS35YJL154C ISM1P48526 1002 aa3.7□□□□□ -1.82
VPS35YJL154C BUB1P41695 1021 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
VPS35YJL154C ERF2Q06551 359 aa3.68□□□□□ -1.82
VPS35YJL154C AIR2Q12476 344 aaKnown RBP3.68□□□□□ -1.82
VPS35YJL154C MAK16P10962 306 aaPredicted RBP3.68□□□□□ -1.82
VPS35YJL154C RAM1P22007 431 aa3.68□□□□□ -1.82
VPS35YJL154C YPP1P46951 817 aa3.68□□□□□ -1.82
VPS35YJL154C STR2P47164 639 aa3.68□□□□□ -1.82
VPS35YJL154C YDL206WQ12424 762 aa3.68□□□□□ -1.82
VPS35YJL154C ERG12P07277 443 aa3.67□□□□□ -1.82
VPS35YJL154C SPT16P32558 1035 aaKnown RBP3.67□□□□□ -1.82
VPS35YJL154C KXD1P53158 218 aa3.67□□□□□ -1.82
VPS35YJL154C ALR1Q08269 859 aa3.67□□□□□ -1.82
VPS35YJL154C PRT1P06103 763 aaKnown RBP3.66□□□□□ -1.82
VPS35YJL154C SSA1P10591 642 aaKnown RBP3.66□□□□□ -1.82
VPS35YJL154C PRE3P38624 215 aa3.66□□□□□ -1.82
VPS35YJL154C GYP1Q08484 637 aa3.66□□□□□ -1.82
VPS35YJL154C TUB4P53378 473 aa3.66□□□□□ -1.82
VPS35YJL154C CPS1P27614 576 aa3.66□□□□□ -1.82
VPS35YJL154C SIS2P36024 562 aa3.66□□□□□ -1.82
VPS35YJL154C RRN7P40992 514 aa3.66□□□□□ -1.82
VPS35YJL154C CHL1P22516 861 aaPredicted RBP3.65□□□□□ -1.82
VPS35YJL154C YDJ1P25491 409 aaKnown RBP3.65□□□□□ -1.82
VPS35YJL154C RSC30P38781 883 aa3.65□□□□□ -1.82
VPS35YJL154C NAF1P53919 492 aaKnown RBP3.65□□□□□ -1.82
VPS35YJL154C RPL34AP87262 121 aaPredicted RBP3.65□□□□□ -1.82
VPS35YJL154C ENO2P00925 437 aaKnown RBP3.65□□□□□ -1.83
VPS35YJL154C RPA14P50106 137 aa3.65□□□□□ -1.83
VPS35YJL154C YDR344CQ05510 147 aa3.65□□□□□ -1.83
VPS35YJL154C BUD20Q08004 166 aaPredicted RBP3.65□□□□□ -1.83
VPS35YJL154C SUB2Q07478 446 aaKnown RBP3.64□□□□□ -1.83
VPS35YJL154C ENV9Q08651 330 aa3.64□□□□□ -1.83
VPS35YJL154C SUP45P12385 437 aaKnown RBP3.64□□□□□ -1.83
VPS35YJL154C ENO1P00924 437 aaKnown RBP3.63□□□□□ -1.83
VPS35YJL154C ATG3P40344 310 aa3.63□□□□□ -1.83
VPS35YJL154C YML082WQ04533 649 aaKnown RBP3.63□□□□□ -1.83
VPS35YJL154C TEC1P18412 486 aa3.63□□□□□ -1.83
VPS35YJL154C TTI1P36097 1038 aa3.63□□□□□ -1.83
VPS35YJL154C GEF1P37020 779 aa3.63□□□□□ -1.83
VPS35YJL154C MCM16Q12262 181 aa3.63□□□□□ -1.83
VPS35YJL154C TY1A-DR4O74302 440 aa3.62□□□□□ -1.83
VPS35YJL154C TY1A-HP0C2I4 478 aaKnown RBP3.62□□□□□ -1.83
VPS35YJL154C TY1A-AP0CX57 440 aa3.62□□□□□ -1.83
VPS35YJL154C TY1A-PR1P0CX58 440 aa3.62□□□□□ -1.83
VPS35YJL154C TY1A-ORP0CX59 440 aa3.62□□□□□ -1.83
VPS35YJL154C TY1A-PR2P0CX60 440 aa3.62□□□□□ -1.83
VPS35YJL154C TY1A-DR5P0CX65 440 aa3.62□□□□□ -1.83
VPS35YJL154C TY1A-ER2P0CX66 440 aa3.62□□□□□ -1.83
VPS35YJL154C TY1A-GR3P0CX67 440 aa3.62□□□□□ -1.83
VPS35YJL154C TY1A-LR1P0CX68 440 aa3.62□□□□□ -1.83
VPS35YJL154C TY1A-MR2P0CX69 440 aa3.62□□□□□ -1.83
VPS35YJL154C GUT2P32191 649 aa3.62□□□□□ -1.83
VPS35YJL154C TY1A-JR2P47099 440 aa3.62□□□□□ -1.83
VPS35YJL154C TY1A-DR1Q03856 440 aa3.62□□□□□ -1.83
VPS35YJL154C TY1A-ML1Q04706 440 aaKnown RBP3.62□□□□□ -1.83
VPS35YJL154C YPR097WQ06839 1073 aa3.62□□□□□ -1.83
VPS35YJL154C TY1A-BRQ12217 440 aa3.62□□□□□ -1.83
VPS35YJL154C TY1A-NL2Q12470 440 aa3.62□□□□□ -1.83
VPS35YJL154C TY1A-GR2Q12485 440 aa3.62□□□□□ -1.83
VPS35YJL154C PAC1P39946 494 aaKnown RBP3.62□□□□□ -1.83
VPS35YJL154C STE20Q03497 939 aaKnown RBP3.62□□□□□ -1.83
VPS35YJL154C SAS4Q04003 481 aa3.62□□□□□ -1.83
VPS35YJL154C SEC2P17065 759 aa3.61□□□□□ -1.83
VPS35YJL154C MRF1P30775 413 aaPredicted RBP3.61□□□□□ -1.83
VPS35YJL154C KTR7P40504 517 aa3.61□□□□□ -1.83
VPS35YJL154C RIM21P48565 533 aa3.61□□□□□ -1.83
VPS35YJL154C ISF1P32488 338 aa3.61□□□□□ -1.83
VPS35YJL154C EMP47P43555 445 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms