RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W YML082WQ04533 649 aaKnown RBP3.25□□□□□ -1.89
RTT107YHR154W PTC3P34221 468 aaKnown RBP3.23□□□□□ -1.89
RTT107YHR154W TY1B-HO13535 1793 aa3.22□□□□□ -1.89
RTT107YHR154W TY1B-DR5P0C2I2 1755 aa3.22□□□□□ -1.89
RTT107YHR154W TY1B-DR6P0C2I3 1755 aa3.22□□□□□ -1.89
RTT107YHR154W TY1B-LR2P0C2I5 1755 aa3.22□□□□□ -1.89
RTT107YHR154W TY1B-LR3P0C2I6 1755 aaKnown RBP3.22□□□□□ -1.89
RTT107YHR154W TY1B-PR1P0C2I9 1755 aaKnown RBP3.22□□□□□ -1.89
RTT107YHR154W TY1B-PR2P0C2J0 1756 aa3.22□□□□□ -1.89
RTT107YHR154W TY1B-PR3P0C2J1 1755 aaKnown RBP3.22□□□□□ -1.89
RTT107YHR154W TY1B-JR1P47098 1755 aa3.22□□□□□ -1.89
RTT107YHR154W TY1B-ML2Q03434 1755 aaKnown RBP3.22□□□□□ -1.89
RTT107YHR154W TY1B-ER1Q03612 1755 aa3.22□□□□□ -1.89
RTT107YHR154W TY1B-ML1Q04711 1755 aaKnown RBP3.22□□□□□ -1.89
RTT107YHR154W TY1B-GR2Q12269 1755 aa3.22□□□□□ -1.89
RTT107YHR154W TY1B-OLQ12273 1755 aa3.22□□□□□ -1.89
RTT107YHR154W TY1B-PLQ12414 1755 aaKnown RBP3.22□□□□□ -1.89
RTT107YHR154W YRF1-1P0CX20 1796 aa3.22□□□□□ -1.89
RTT107YHR154W YRF1-5P0CX21 1796 aa3.22□□□□□ -1.89
RTT107YHR154W YRF1-8P0CX22 1796 aa3.22□□□□□ -1.89
RTT107YHR154W GBP2P25555 427 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
RTT107YHR154W MPC54Q08550 464 aa3.21□□□□□ -1.9
RTT107YHR154W VPS15P22219 1454 aa3.21□□□□□ -1.9
RTT107YHR154W YPL062WQ02781 134 aa3.21□□□□□ -1.9
RTT107YHR154W AI4P03878 556 aa3.2□□□□□ -1.9
RTT107YHR154W MPH3P0CE00 602 aa3.2□□□□□ -1.9
RTT107YHR154W VPS70P47161 811 aa3.2□□□□□ -1.9
RTT107YHR154W TY2B-BQ12491 1770 aa3.2□□□□□ -1.9
RTT107YHR154W HGH1P48362 394 aaKnown RBP3.2□□□□□ -1.9
RTT107YHR154W GYP1Q08484 637 aa3.2□□□□□ -1.9
RTT107YHR154W TRM732Q03496 1420 aa3.2□□□□□ -1.9
RTT107YHR154W NMA111P53920 997 aa3.19□□□□□ -1.9
RTT107YHR154W AMS1P22855 1083 aa3.19□□□□□ -1.9
RTT107YHR154W EDS1P38073 919 aa3.19□□□□□ -1.9
RTT107YHR154W CKB1P43639 278 aa3.19□□□□□ -1.9
RTT107YHR154W NST1P53935 1240 aa3.18□□□□□ -1.9
RTT107YHR154W ILV3P39522 585 aaKnown RBP3.18□□□□□ -1.9
RTT107YHR154W NUP159P40477 1460 aa3.18□□□□□ -1.9
RTT107YHR154W MMS22Q06164 1454 aa3.18□□□□□ -1.9
RTT107YHR154W SOL3P38858 249 aa3.17□□□□□ -1.9
RTT107YHR154W TY1B-DR3Q99231 1755 aa3.17□□□□□ -1.9
RTT107YHR154W NTE1Q04958 1679 aa3.17□□□□□ -1.9
RTT107YHR154W GAR1P28007 205 aaKnown RBP3.17□□□□□ -1.9
RTT107YHR154W TOP2P06786 1428 aaKnown RBP3.16□□□□□ -1.9
RTT107YHR154W NUP170P38181 1502 aa3.16□□□□□ -1.9
RTT107YHR154W MAK11P20484 414 aaKnown RBP3.15□□□□□ -1.9
RTT107YHR154W RPO21P04050 1733 aaKnown RBP3.15□□□□□ -1.91
RTT107YHR154W YPR015CQ12531 247 aa3.15□□□□□ -1.91
RTT107YHR154W DPL1Q05567 589 aa3.14□□□□□ -1.91
RTT107YHR154W SSN2P38931 1420 aa3.14□□□□□ -1.91
RTT107YHR154W TY1B-JR2P47100 1755 aaKnown RBP3.14□□□□□ -1.91
RTT107YHR154W TY1B-ER2Q03619 1755 aa3.14□□□□□ -1.91
RTT107YHR154W TY1B-MR1Q04214 1755 aa3.14□□□□□ -1.91
RTT107YHR154W TY1B-MR2Q04670 1755 aaKnown RBP3.14□□□□□ -1.91
RTT107YHR154W TY1B-LR1Q12088 1755 aaKnown RBP3.14□□□□□ -1.91
RTT107YHR154W TY1B-NL1Q12112 1755 aa3.14□□□□□ -1.91
RTT107YHR154W TY1B-GR1Q12141 1755 aa3.14□□□□□ -1.91
RTT107YHR154W TY1B-BLQ12490 1755 aa3.14□□□□□ -1.91
RTT107YHR154W KIN1P13185 1064 aa3.14□□□□□ -1.91
RTT107YHR154W SPO14P36126 1683 aa3.14□□□□□ -1.91
RTT107YHR154W YML020WQ03722 664 aa3.14□□□□□ -1.91
RTT107YHR154W YEL077CQ3E7X8 1277 aa3.14□□□□□ -1.91
RTT107YHR154W DOP1Q03921 1698 aa3.13□□□□□ -1.91
RTT107YHR154W COQ8P27697 501 aa3.13□□□□□ -1.91
RTT107YHR154W SET1P38827 1080 aaKnown RBP3.13□□□□□ -1.91
RTT107YHR154W IFH1P39520 1085 aa3.12□□□□□ -1.91
RTT107YHR154W TRM3Q07527 1436 aa3.12□□□□□ -1.91
RTT107YHR154W GLC3P32775 704 aa3.12□□□□□ -1.91
RTT107YHR154W SLI15P38283 698 aa3.11□□□□□ -1.91
RTT107YHR154W YGR273CP53329 174 aa3.11□□□□□ -1.91
RTT107YHR154W SNT2P53127 1403 aa3.11□□□□□ -1.91
RTT107YHR154W GCR2Q01722 534 aa3.1□□□□□ -1.91
RTT107YHR154W BRE2P43132 505 aa3.1□□□□□ -1.91
RTT107YHR154W ISU2Q12056 156 aa3.1□□□□□ -1.91
RTT107YHR154W PDR15Q04182 1529 aaKnown RBP3.1□□□□□ -1.91
RTT107YHR154W NOP7P53261 605 aaKnown RBP3.1□□□□□ -1.91
RTT107YHR154W SAS4Q04003 481 aa3.1□□□□□ -1.91
RTT107YHR154W IOC4Q04213 475 aa3.1□□□□□ -1.91
RTT107YHR154W NAP1P25293 417 aaKnown RBP3.09□□□□□ -1.91
RTT107YHR154W RAM2P29703 316 aa3.09□□□□□ -1.91
RTT107YHR154W SPP41P38904 1435 aa3.09□□□□□ -1.91
RTT107YHR154W SLX8P40072 274 aa3.09□□□□□ -1.91
RTT107YHR154W SMC4Q12267 1418 aa3.09□□□□□ -1.92
RTT107YHR154W ULS1Q08562 1619 aa3.09□□□□□ -1.92
RTT107YHR154W RAM1P22007 431 aa3.08□□□□□ -1.92
RTT107YHR154W VTH1P40438 1549 aa3.08□□□□□ -1.92
RTT107YHR154W VTH2P40890 1549 aa3.08□□□□□ -1.92
RTT107YHR154W PBS2P08018 668 aa3.08□□□□□ -1.92
RTT107YHR154W ATF2P53296 535 aa3.08□□□□□ -1.92
RTT107YHR154W TSC11P40061 1430 aa3.07□□□□□ -1.92
RTT107YHR154W DNF3Q12674 1656 aa3.07□□□□□ -1.92
RTT107YHR154W SDH2P21801 266 aa3.07□□□□□ -1.92
RTT107YHR154W MRF1P30775 413 aaPredicted RBP3.07□□□□□ -1.92
RTT107YHR154W SSA1P10591 642 aaKnown RBP3.06□□□□□ -1.92
RTT107YHR154W PDR1P12383 1068 aa3.06□□□□□ -1.92
RTT107YHR154W YNR021WP53723 404 aaKnown RBP3.06□□□□□ -1.92
RTT107YHR154W MYO4P32492 1471 aa3.06□□□□□ -1.92
RTT107YHR154W BUD3P25558 1636 aa3.06□□□□□ -1.92
RTT107YHR154W IES2P40154 320 aa3.05□□□□□ -1.92
RTT107YHR154W PDR12Q02785 1511 aa3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms