RNA–Protein interactions for RNA: YHR087W

RTC3, Transcript of Protein of unknown function involved in RNA metabolism, yeastyeast

Gene RTC3, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTC3YHR087W NSR1P27476 414 aaKnown RBP RIP-Chip data20.21■□□□□ 0.83not detected
RTC3YHR087W PRI1P10363 409 aa20.19■□□□□ 0.82
RTC3YHR087W YMR074CQ04773 145 aa20.19■□□□□ 0.82
RTC3YHR087W SPE2P21182 396 aa20.18■□□□□ 0.82
RTC3YHR087W REB1P21538 810 aa20.18■□□□□ 0.82
RTC3YHR087W RAD9P14737 1309 aa20.16■□□□□ 0.82
RTC3YHR087W NAP1P25293 417 aaKnown RBP20.13■□□□□ 0.81
RTC3YHR087W TAF8Q03750 510 aa20.12■□□□□ 0.81
RTC3YHR087W PDS5Q04264 1277 aa20.12■□□□□ 0.81
RTC3YHR087W ENT1Q12518 454 aa20.1■□□□□ 0.81
RTC3YHR087W CAB1Q04430 367 aa20.08■□□□□ 0.81
RTC3YHR087W ENV9Q08651 330 aa20.04■□□□□ 0.8
RTC3YHR087W PSD2P53037 1138 aaKnown RBP20.02■□□□□ 0.8
RTC3YHR087W IMH1Q06704 911 aaKnown RBP19.96■□□□□ 0.79
RTC3YHR087W YRF1-2P40105 1681 aa19.94■□□□□ 0.78
RTC3YHR087W CHZ1P40019 153 aaPredicted RBP19.94■□□□□ 0.78
RTC3YHR087W FKH1P40466 484 aa19.9■□□□□ 0.78
RTC3YHR087W BUD31P25337 157 aaPredicted RBP19.89■□□□□ 0.77
RTC3YHR087W RRP5Q05022 1729 aaKnown RBP19.89■□□□□ 0.77
RTC3YHR087W LEU3P08638 886 aa19.83■□□□□ 0.77
RTC3YHR087W RTG3P38165 486 aa19.82■□□□□ 0.76
RTC3YHR087W PSK1P31374 1356 aa19.81■□□□□ 0.76
RTC3YHR087W NST1P53935 1240 aa19.75■□□□□ 0.75
RTC3YHR087W IOC4Q04213 475 aa19.75■□□□□ 0.75
RTC3YHR087W RCM1P53972 490 aa19.74■□□□□ 0.75
RTC3YHR087W YML133CQ03099 1374 aa19.73■□□□□ 0.75
RTC3YHR087W YLL067CQ07888 1374 aa19.73■□□□□ 0.75
RTC3YHR087W YLL066CQ99208 1374 aa19.73■□□□□ 0.75
RTC3YHR087W PRS1P32895 427 aaKnown RBP19.72■□□□□ 0.75
RTC3YHR087W PRP45P28004 379 aaPredicted RBP19.7■□□□□ 0.74
RTC3YHR087W CPS1P27614 576 aa19.69■□□□□ 0.74
RTC3YHR087W PPH3P32345 308 aa19.69■□□□□ 0.74
RTC3YHR087W MLP1Q02455 1875 aaKnown RBP19.66■□□□□ 0.74
RTC3YHR087W LEU2P04173 364 aaPredicted RBP19.61■□□□□ 0.73
RTC3YHR087W UBP1P25037 809 aa19.61■□□□□ 0.73
RTC3YHR087W YEF3P16521 1044 aaKnown RBP19.59■□□□□ 0.73
RTC3YHR087W TY4B-HP0C2J7 1802 aa19.58■□□□□ 0.73
RTC3YHR087W TY4B-JP47024 1803 aa19.58■□□□□ 0.73
RTC3YHR087W MTR4P47047 1073 aaKnown RBP19.58■□□□□ 0.72
RTC3YHR087W TAP42Q04372 366 aa19.57■□□□□ 0.72
RTC3YHR087W RPP0P05317 312 aaKnown RBP19.56■□□□□ 0.72
RTC3YHR087W PRP5P21372 849 aaPredicted RBP19.54■□□□□ 0.72
RTC3YHR087W URB1P34241 1764 aaKnown RBP19.52■□□□□ 0.72
RTC3YHR087W TRK1P12685 1235 aa19.52■□□□□ 0.72
RTC3YHR087W PDI1P17967 522 aaKnown RBP19.52■□□□□ 0.72
RTC3YHR087W YBL086CP38177 466 aa19.51■□□□□ 0.71
RTC3YHR087W PRP43P53131 767 aaKnown RBP19.51■□□□□ 0.71
RTC3YHR087W RPN11P43588 306 aaKnown RBP19.5■□□□□ 0.71
RTC3YHR087W ADE6P38972 1358 aaKnown RBP19.49■□□□□ 0.71
RTC3YHR087W EDE1P34216 1381 aa19.47■□□□□ 0.71
RTC3YHR087W GRX4P32642 244 aa19.47■□□□□ 0.71
RTC3YHR087W NOP2P40991 618 aaKnown RBP19.47■□□□□ 0.71
RTC3YHR087W GTT3P39996 337 aa19.46■□□□□ 0.71
RTC3YHR087W RTF1P53064 558 aa19.46■□□□□ 0.71
RTC3YHR087W DOT5P40553 215 aa19.45■□□□□ 0.7
RTC3YHR087W VPS27P40343 622 aaKnown RBP19.44■□□□□ 0.7
RTC3YHR087W KAR2P16474 682 aaKnown RBP19.42■□□□□ 0.7
RTC3YHR087W CDC45Q08032 650 aa19.42■□□□□ 0.7
RTC3YHR087W MSB3P48566 633 aaPredicted RBP19.41■□□□□ 0.7
RTC3YHR087W UGA2P38067 497 aa19.4■□□□□ 0.7
RTC3YHR087W IES2P40154 320 aa19.39■□□□□ 0.69
RTC3YHR087W SSA1P10591 642 aaKnown RBP19.38■□□□□ 0.69
RTC3YHR087W AUS1Q08409 1394 aa19.37■□□□□ 0.69
RTC3YHR087W YDL144CQ07589 356 aa19.37■□□□□ 0.69
RTC3YHR087W ROM2P51862 1356 aaKnown RBP19.36■□□□□ 0.69
RTC3YHR087W FKS3Q04952 1785 aa19.36■□□□□ 0.69
RTC3YHR087W CSE4P36012 229 aa19.35■□□□□ 0.69
RTC3YHR087W HIM1Q06674 414 aa19.34■□□□□ 0.69
RTC3YHR087W RPS24AP0CX31 135 aaKnown RBP19.33■□□□□ 0.68
RTC3YHR087W RPS24BP0CX32 135 aaKnown RBP19.33■□□□□ 0.68
RTC3YHR087W NPR2P39923 615 aa19.33■□□□□ 0.68
RTC3YHR087W YRB30P53107 440 aaPredicted RBP19.33■□□□□ 0.68
RTC3YHR087W RRP46P53256 223 aaPredicted RBP19.33■□□□□ 0.68
RTC3YHR087W FOX2Q02207 900 aaKnown RBP19.33■□□□□ 0.68
RTC3YHR087W LYS4P49367 693 aaPredicted RBP19.31■□□□□ 0.68
RTC3YHR087W RSF2P46974 1380 aa19.31■□□□□ 0.68
RTC3YHR087W RTR1P40084 226 aaPredicted RBP19.29■□□□□ 0.68
RTC3YHR087W ALD2P47771 506 aa19.29■□□□□ 0.68
RTC3YHR087W TCB1Q12466 1186 aa19.29■□□□□ 0.68
RTC3YHR087W YJL181WP46987 611 aa19.27■□□□□ 0.68
RTC3YHR087W SSA2P10592 639 aaKnown RBP19.26■□□□□ 0.67
RTC3YHR087W RPO41P13433 1351 aaKnown RBP19.26■□□□□ 0.67
RTC3YHR087W YRF1-3P0CX14 1859 aa19.26■□□□□ 0.67
RTC3YHR087W YRF1-7P0CX15 1859 aa19.26■□□□□ 0.67
RTC3YHR087W YRF1-6P53819 1859 aa19.26■□□□□ 0.67
RTC3YHR087W SNF2P22082 1703 aa19.25■□□□□ 0.67
RTC3YHR087W MPP10P47083 593 aaKnown RBP19.25■□□□□ 0.67
RTC3YHR087W PAP2P53632 584 aaKnown RBP19.25■□□□□ 0.67
RTC3YHR087W RVB2Q12464 471 aaKnown RBP19.25■□□□□ 0.67
RTC3YHR087W PRD1P25375 712 aa19.21■□□□□ 0.67
RTC3YHR087W GAS4Q08271 471 aa19.21■□□□□ 0.67
RTC3YHR087W DPS1P04802 557 aaKnown RBP19.2■□□□□ 0.66
RTC3YHR087W SLM3Q12093 417 aa19.2■□□□□ 0.66
RTC3YHR087W SUI2P20459 304 aaKnown RBP19.19■□□□□ 0.66
RTC3YHR087W CTH1P47976 325 aa19.18■□□□□ 0.66
RTC3YHR087W PRP40P33203 583 aaKnown RBP19.17■□□□□ 0.66
RTC3YHR087W LAM6Q08001 693 aa19.17■□□□□ 0.66
RTC3YHR087W THI22Q06490 572 aa19.13■□□□□ 0.65
RTC3YHR087W SAP155P43612 1002 aa19.12■□□□□ 0.65
RTC3YHR087W NAB6Q03735 1134 aaKnown RBP RIP-Chip data19.12■□□□□ 0.65not detected
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms