RNA–Protein interactions for RNA: YHR087W

RTC3, Transcript of Protein of unknown function involved in RNA metabolism, yeastyeast

Gene RTC3, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTC3YHR087W TY1B-LR1Q12088 1755 aaKnown RBP23.25■■□□□ 1.31
RTC3YHR087W TY1B-NL1Q12112 1755 aa23.25■■□□□ 1.31
RTC3YHR087W TY1B-GR1Q12141 1755 aa23.25■■□□□ 1.31
RTC3YHR087W TY1B-BLQ12490 1755 aa23.25■■□□□ 1.31
RTC3YHR087W DRS2P39524 1355 aa23.24■■□□□ 1.31
RTC3YHR087W NTE1Q04958 1679 aa23.2■■□□□ 1.3
RTC3YHR087W YFR006WP43590 535 aa23.2■■□□□ 1.3
RTC3YHR087W TSC11P40061 1430 aa23.13■■□□□ 1.29
RTC3YHR087W IRC20Q06554 1556 aa23.13■■□□□ 1.29
RTC3YHR087W VTH1P40438 1549 aa23.1■■□□□ 1.29
RTC3YHR087W VTH2P40890 1549 aa23.1■■□□□ 1.29
RTC3YHR087W MYO4P32492 1471 aa23.1■■□□□ 1.29
RTC3YHR087W RPO21P04050 1733 aaKnown RBP23.08■■□□□ 1.29
RTC3YHR087W DNF2Q12675 1612 aa22.93■■□□□ 1.26
RTC3YHR087W SNT2P53127 1403 aa22.85■■□□□ 1.25
RTC3YHR087W NUP170P38181 1502 aa22.82■■□□□ 1.24
RTC3YHR087W SAS10Q12136 610 aaPredicted RBP22.79■■□□□ 1.24
RTC3YHR087W SNQ2P32568 1501 aaKnown RBP22.77■■□□□ 1.24
RTC3YHR087W TAF7Q05021 590 aa22.76■■□□□ 1.23
RTC3YHR087W SPO14P36126 1683 aa22.71■■□□□ 1.23
RTC3YHR087W STH1P32597 1359 aa22.65■■□□□ 1.22
RTC3YHR087W MET10P39692 1035 aa22.65■■□□□ 1.22
RTC3YHR087W ULS1Q08562 1619 aa22.64■■□□□ 1.21
RTC3YHR087W PDR12Q02785 1511 aa22.54■■□□□ 1.2
RTC3YHR087W DOP1Q03921 1698 aa22.52■■□□□ 1.2
RTC3YHR087W YOR093CQ12275 1648 aa22.46■■□□□ 1.19
RTC3YHR087W TRM3Q07527 1436 aa22.41■■□□□ 1.18
RTC3YHR087W RTT106P40161 455 aa22.38■■□□□ 1.17
RTC3YHR087W GDB1Q06625 1536 aa22.37■■□□□ 1.17
RTC3YHR087W IQG1Q12280 1495 aa22.37■■□□□ 1.17
RTC3YHR087W PDR15Q04182 1529 aaKnown RBP22.36■■□□□ 1.17
RTC3YHR087W MLP2P40457 1679 aa22.36■■□□□ 1.17
RTC3YHR087W PDR10P51533 1564 aa22.34■■□□□ 1.17
RTC3YHR087W IKI3Q06706 1349 aaKnown RBP22.3■■□□□ 1.16
RTC3YHR087W GEA1P47102 1408 aaPredicted RBP22.29■■□□□ 1.16
RTC3YHR087W NUP157P40064 1391 aaKnown RBP22.25■■□□□ 1.15
RTC3YHR087W BUD3P25558 1636 aa22.24■■□□□ 1.15
RTC3YHR087W IFH1P39520 1085 aa22.21■■□□□ 1.15
RTC3YHR087W ARO1P08566 1588 aaKnown RBP22.09■■□□□ 1.13
RTC3YHR087W CHC1P22137 1653 aaKnown RBP22.06■■□□□ 1.12
RTC3YHR087W TY3B-GQ99315 1547 aa21.98■■□□□ 1.11
RTC3YHR087W CAT8P39113 1433 aa21.97■■□□□ 1.11
RTC3YHR087W DNF3Q12674 1656 aa21.95■■□□□ 1.1
RTC3YHR087W SSM4P40318 1319 aa21.87■■□□□ 1.09
RTC3YHR087W SEC7P11075 2009 aaKnown RBP21.8■■□□□ 1.08
RTC3YHR087W YBT1P32386 1661 aa21.77■■□□□ 1.08
RTC3YHR087W YAP3P38749 330 aa21.72■■□□□ 1.07
RTC3YHR087W SRB8P25648 1427 aa21.63■■□□□ 1.05
RTC3YHR087W YSP2Q06681 1438 aa21.58■■□□□ 1.05
RTC3YHR087W MAK10Q02197 733 aa21.55■■□□□ 1.04
RTC3YHR087W BNR1P40450 1375 aa21.53■■□□□ 1.04
RTC3YHR087W CKB1P43639 278 aa21.52■■□□□ 1.04
RTC3YHR087W USO1P25386 1790 aa21.41■■□□□ 1.02
RTC3YHR087W URN1Q06525 465 aaKnown RBP21.38■■□□□ 1.01
RTC3YHR087W BUD21Q08492 214 aaPredicted RBP21.34■■□□□ 1.01
RTC3YHR087W GCN2P15442 1659 aa21.19■□□□□ 0.98
RTC3YHR087W HAP1P0CE41 1502 aa21.19■□□□□ 0.98
RTC3YHR087W IML1P47170 1584 aa21.13■□□□□ 0.97
RTC3YHR087W TY1B-NL2Q99337 1749 aaKnown RBP21.12■□□□□ 0.97
RTC3YHR087W YMR196WQ04336 1088 aa21.11■□□□□ 0.97
RTC3YHR087W IPL1P38991 367 aa21.08■□□□□ 0.97
RTC3YHR087W NUP188P52593 1655 aaKnown RBP21.06■□□□□ 0.96
RTC3YHR087W THI12P42883 340 aa21.06■□□□□ 0.96
RTC3YHR087W THI5P43534 340 aa21.06■□□□□ 0.96
RTC3YHR087W THI11P47183 340 aa21.06■□□□□ 0.96
RTC3YHR087W THI13Q07748 340 aa21.06■□□□□ 0.96
RTC3YHR087W NOP7P53261 605 aaKnown RBP20.95■□□□□ 0.94
RTC3YHR087W VMR1P38735 1592 aa20.94■□□□□ 0.94
RTC3YHR087W PAF1P38351 445 aa20.93■□□□□ 0.94
RTC3YHR087W PDR5P33302 1511 aaKnown RBP20.92■□□□□ 0.94
RTC3YHR087W TYS1P36421 394 aaKnown RBP20.91■□□□□ 0.94
RTC3YHR087W POL5P39985 1022 aaKnown RBP20.86■□□□□ 0.93
RTC3YHR087W BFR2Q06631 534 aaKnown RBP20.84■□□□□ 0.93
RTC3YHR087W RAV1P47104 1357 aa20.78■□□□□ 0.92
RTC3YHR087W RTC1Q08281 1341 aa20.72■□□□□ 0.91
RTC3YHR087W YAH1Q12184 172 aaKnown RBP20.71■□□□□ 0.91
RTC3YHR087W PDR11P40550 1411 aa20.7■□□□□ 0.9
RTC3YHR087W GLN1P32288 370 aaKnown RBP20.64■□□□□ 0.89
RTC3YHR087W TY3B-IQ7LHG5 1498 aaKnown RBP20.52■□□□□ 0.88
RTC3YHR087W ESL2P36168 1195 aa20.49■□□□□ 0.87
RTC3YHR087W YIL055CP40523 627 aaKnown RBP20.48■□□□□ 0.87
RTC3YHR087W APP1P53933 587 aa20.47■□□□□ 0.87
RTC3YHR087W SEC3P33332 1336 aaKnown RBP20.47■□□□□ 0.87
RTC3YHR087W PTP3P40048 928 aa20.46■□□□□ 0.87
RTC3YHR087W CFT1Q06632 1357 aaKnown RBP20.42■□□□□ 0.86
RTC3YHR087W KRE5P22023 1365 aa20.39■□□□□ 0.85
RTC3YHR087W TAF5P38129 798 aa20.39■□□□□ 0.85
RTC3YHR087W MHP1P43638 1398 aa20.38■□□□□ 0.85
RTC3YHR087W SCT1P32784 759 aa20.36■□□□□ 0.85
RTC3YHR087W NUP192P47054 1683 aa20.32■□□□□ 0.84
RTC3YHR087W BCK1Q01389 1478 aa20.32■□□□□ 0.84
RTC3YHR087W RIA1P53893 1110 aa20.32■□□□□ 0.84
RTC3YHR087W MRX12P47084 519 aa20.29■□□□□ 0.84
RTC3YHR087W YNR029CP53729 429 aaKnown RBP20.29■□□□□ 0.84
RTC3YHR087W KIP3P53086 805 aaKnown RBP20.28■□□□□ 0.84
RTC3YHR087W ALD4P46367 519 aaKnown RBP20.27■□□□□ 0.84
RTC3YHR087W YLR419WQ06698 1435 aaKnown RBP20.27■□□□□ 0.83
RTC3YHR087W ORC1P54784 914 aaPredicted RBP20.26■□□□□ 0.83
RTC3YHR087W ENP1P38333 483 aaKnown RBP20.24■□□□□ 0.83
RTC3YHR087W SPT7P35177 1332 aa20.22■□□□□ 0.83
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms