RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C PDS5Q04264 1277 aa4.04□□□□□ -1.76
NMD2YHR077C APC1P53886 1748 aa4.03□□□□□ -1.76
NMD2YHR077C FKH1P40466 484 aa4.03□□□□□ -1.77
NMD2YHR077C SPE2P21182 396 aa4.02□□□□□ -1.77
NMD2YHR077C YRF1-2P40105 1681 aa4.02□□□□□ -1.77
NMD2YHR077C RTG3P38165 486 aa4.01□□□□□ -1.77
NMD2YHR077C TRK1P12685 1235 aa4.01□□□□□ -1.77
NMD2YHR077C TAF8Q03750 510 aa4.01□□□□□ -1.77
NMD2YHR077C LEU3P08638 886 aa4.01□□□□□ -1.77
NMD2YHR077C IOC4Q04213 475 aa4.01□□□□□ -1.77
NMD2YHR077C CAB1Q04430 367 aa4.01□□□□□ -1.77
NMD2YHR077C KRE5P22023 1365 aa4□□□□□ -1.77
NMD2YHR077C PSK1P31374 1356 aa4□□□□□ -1.77
NMD2YHR077C AUS1Q08409 1394 aa4□□□□□ -1.77
NMD2YHR077C URB1P34241 1764 aaKnown RBP4□□□□□ -1.77
NMD2YHR077C RRP46P53256 223 aaPredicted RBP4□□□□□ -1.77
NMD2YHR077C PPH3P32345 308 aa3.99□□□□□ -1.77
NMD2YHR077C FKS3Q04952 1785 aa3.97□□□□□ -1.77
NMD2YHR077C CHZ1P40019 153 aaPredicted RBP3.96□□□□□ -1.77
NMD2YHR077C URN1Q06525 465 aaKnown RBP3.96□□□□□ -1.77
NMD2YHR077C ADE6P38972 1358 aaKnown RBP3.96□□□□□ -1.78
NMD2YHR077C MAK10Q02197 733 aa3.94□□□□□ -1.78
NMD2YHR077C SUI2P20459 304 aaKnown RBP3.94□□□□□ -1.78
NMD2YHR077C CPS1P27614 576 aa3.94□□□□□ -1.78
NMD2YHR077C RCM1P53972 490 aa3.94□□□□□ -1.78
NMD2YHR077C RPP0P05317 312 aaKnown RBP3.94□□□□□ -1.78
NMD2YHR077C RVB2Q12464 471 aaKnown RBP3.94□□□□□ -1.78
NMD2YHR077C YRF1-4O13559 1382 aa3.93□□□□□ -1.78
NMD2YHR077C YRF1-3P0CX14 1859 aa3.93□□□□□ -1.78
NMD2YHR077C YRF1-7P0CX15 1859 aa3.93□□□□□ -1.78
NMD2YHR077C YRF1-6P53819 1859 aa3.93□□□□□ -1.78
NMD2YHR077C FUN12P39730 1002 aaKnown RBP3.92□□□□□ -1.78
NMD2YHR077C HIM1Q06674 414 aa3.92□□□□□ -1.78
NMD2YHR077C PRP43P53131 767 aaKnown RBP3.92□□□□□ -1.78
NMD2YHR077C YNR029CP53729 429 aaKnown RBP3.92□□□□□ -1.78
NMD2YHR077C HEF3P53978 1044 aaKnown RBP3.92□□□□□ -1.78
NMD2YHR077C RIA1P53893 1110 aa3.91□□□□□ -1.78
NMD2YHR077C THI22Q06490 572 aa3.91□□□□□ -1.78
NMD2YHR077C VPS27P40343 622 aaKnown RBP3.9□□□□□ -1.78
NMD2YHR077C TAP42Q04372 366 aa3.9□□□□□ -1.78
NMD2YHR077C MPP10P47083 593 aaKnown RBP3.9□□□□□ -1.78
NMD2YHR077C YDL144CQ07589 356 aa3.9□□□□□ -1.78
NMD2YHR077C CDC45Q08032 650 aa3.9□□□□□ -1.79
NMD2YHR077C SAP155P43612 1002 aa3.89□□□□□ -1.79
NMD2YHR077C DUR1,2P32528 1835 aaKnown RBP3.89□□□□□ -1.79
NMD2YHR077C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
NMD2YHR077C PRD1P25375 712 aa3.88□□□□□ -1.79
NMD2YHR077C SIR4P11978 1358 aa3.88□□□□□ -1.79
NMD2YHR077C RPO41P13433 1351 aaKnown RBP3.87□□□□□ -1.79
NMD2YHR077C LEU2P04173 364 aaPredicted RBP3.87□□□□□ -1.79
NMD2YHR077C MRX12P47084 519 aa3.87□□□□□ -1.79
NMD2YHR077C RTT109Q07794 436 aa3.87□□□□□ -1.79
NMD2YHR077C MTR4P47047 1073 aaKnown RBP3.86□□□□□ -1.79
NMD2YHR077C OPY1P38271 328 aa3.86□□□□□ -1.79
NMD2YHR077C YIL092WP40497 633 aa3.86□□□□□ -1.79
NMD2YHR077C RPS24AP0CX31 135 aaKnown RBP3.85□□□□□ -1.79
NMD2YHR077C RPS24BP0CX32 135 aaKnown RBP3.85□□□□□ -1.79
NMD2YHR077C UTP10P42945 1769 aaKnown RBP3.85□□□□□ -1.79
NMD2YHR077C RIM15P43565 1770 aa3.85□□□□□ -1.79
NMD2YHR077C SCT1P32784 759 aa3.84□□□□□ -1.79
NMD2YHR077C PDI1P17967 522 aaKnown RBP3.84□□□□□ -1.79
NMD2YHR077C RTR1P40084 226 aaPredicted RBP3.84□□□□□ -1.79
NMD2YHR077C YRB30P53107 440 aaPredicted RBP3.84□□□□□ -1.79
NMD2YHR077C TPD3P31383 635 aa3.83□□□□□ -1.8
NMD2YHR077C DMA1P38823 416 aa3.83□□□□□ -1.8
NMD2YHR077C ILV3P39522 585 aaKnown RBP3.83□□□□□ -1.8
NMD2YHR077C NAP1P25293 417 aaKnown RBP3.83□□□□□ -1.8
NMD2YHR077C GRX4P32642 244 aa3.83□□□□□ -1.8
NMD2YHR077C YIR014WP40570 242 aa3.83□□□□□ -1.8
NMD2YHR077C KAR2P16474 682 aaKnown RBP3.82□□□□□ -1.8
NMD2YHR077C THI12P42883 340 aa3.82□□□□□ -1.8
NMD2YHR077C THI5P43534 340 aa3.82□□□□□ -1.8
NMD2YHR077C THI11P47183 340 aa3.82□□□□□ -1.8
NMD2YHR077C DSD1P53095 428 aa3.82□□□□□ -1.8
NMD2YHR077C THI13Q07748 340 aa3.82□□□□□ -1.8
NMD2YHR077C IME2P32581 645 aa3.82□□□□□ -1.8
NMD2YHR077C GAS4Q08271 471 aa3.82□□□□□ -1.8
NMD2YHR077C ABP1P15891 592 aaKnown RBP3.82□□□□□ -1.8
NMD2YHR077C POL32P47110 350 aa3.81□□□□□ -1.8
NMD2YHR077C CSE4P36012 229 aa3.81□□□□□ -1.8
NMD2YHR077C NTH2P35172 780 aa3.8□□□□□ -1.8
NMD2YHR077C AKL1P38080 1108 aaKnown RBP3.8□□□□□ -1.8
NMD2YHR077C PTP3P40048 928 aa3.8□□□□□ -1.8
NMD2YHR077C BUB1P41695 1021 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
NMD2YHR077C DPS1P04802 557 aaKnown RBP3.8□□□□□ -1.8
NMD2YHR077C RPC31P17890 251 aa3.8□□□□□ -1.8
NMD2YHR077C YMR196WQ04336 1088 aa3.8□□□□□ -1.8
NMD2YHR077C DAL5P15365 543 aa3.79□□□□□ -1.8
NMD2YHR077C YNL050CP53952 270 aa3.79□□□□□ -1.8
NMD2YHR077C RTF1P53064 558 aa3.78□□□□□ -1.8
NMD2YHR077C EDE1P34216 1381 aa3.78□□□□□ -1.8
NMD2YHR077C MSB3P48566 633 aaPredicted RBP3.78□□□□□ -1.8
NMD2YHR077C SRT1Q03175 343 aa3.78□□□□□ -1.8
NMD2YHR077C SLM3Q12093 417 aa3.78□□□□□ -1.8
NMD2YHR077C PAP2P53632 584 aaKnown RBP3.77□□□□□ -1.81
NMD2YHR077C LYS2P07702 1392 aa3.77□□□□□ -1.81
NMD2YHR077C NUP145P49687 1317 aa3.76□□□□□ -1.81
NMD2YHR077C COQ4O13525 335 aa3.76□□□□□ -1.81
NMD2YHR077C TRP5P00931 707 aaKnown RBP3.76□□□□□ -1.81
NMD2YHR077C RAD2P07276 1031 aa3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms