RNA–Protein interactions for RNA: YGL180W

ATG1, Transcript of Protein serine/threonine kinase, yeastyeast

Gene ATG1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG1YGL180W ASF1P32447 279 aa6.84□□□□□ -1.31
ATG1YGL180W YGR273CP53329 174 aa6.84□□□□□ -1.31
ATG1YGL180W FPK1P53739 893 aa6.84□□□□□ -1.31
ATG1YGL180W RPL34BP40525 121 aaKnown RBP6.83□□□□□ -1.32
ATG1YGL180W SCJ1P25303 377 aa6.83□□□□□ -1.32
ATG1YGL180W YJU3P28321 313 aa6.83□□□□□ -1.32
ATG1YGL180W YJR107WP47145 328 aa6.83□□□□□ -1.32
ATG1YGL180W CWC15Q03772 175 aaKnown RBP6.83□□□□□ -1.32
ATG1YGL180W YRB30P53107 440 aaPredicted RBP6.82□□□□□ -1.32
ATG1YGL180W PPX1P38698 397 aa6.82□□□□□ -1.32
ATG1YGL180W YHL050CP38721 697 aa6.82□□□□□ -1.32
ATG1YGL180W YHR219WP38900 624 aa6.82□□□□□ -1.32
ATG1YGL180W MVP1P40959 511 aaKnown RBP6.82□□□□□ -1.32
ATG1YGL180W RNH70P53331 553 aa6.82□□□□□ -1.32
ATG1YGL180W SVF1Q05515 481 aa6.82□□□□□ -1.32
ATG1YGL180W YEL077CQ3E7X8 1277 aa6.82□□□□□ -1.32
ATG1YGL180W SIS2P36024 562 aa6.81□□□□□ -1.32
ATG1YGL180W NNF1P47149 201 aa6.81□□□□□ -1.32
ATG1YGL180W SEC20P28791 383 aa6.81□□□□□ -1.32
ATG1YGL180W SEC8P32855 1065 aa6.8□□□□□ -1.32
ATG1YGL180W BUD6P41697 788 aa6.8□□□□□ -1.32
ATG1YGL180W POL32P47110 350 aa6.8□□□□□ -1.32
ATG1YGL180W SCY1P53009 804 aa6.8□□□□□ -1.32
ATG1YGL180W CIT2P08679 460 aa6.8□□□□□ -1.32
ATG1YGL180W SIT4P20604 311 aa6.8□□□□□ -1.32
ATG1YGL180W ESS1P22696 170 aa6.8□□□□□ -1.32
ATG1YGL180W YOL098CQ12496 1037 aa6.8□□□□□ -1.32
ATG1YGL180W RTS3P53289 263 aa6.79□□□□□ -1.32
ATG1YGL180W TAT2P38967 592 aa6.78□□□□□ -1.32
ATG1YGL180W MAK16P10962 306 aaPredicted RBP6.78□□□□□ -1.32
ATG1YGL180W MET4P32389 672 aa6.78□□□□□ -1.32
ATG1YGL180W OSW7P43611 510 aa6.77□□□□□ -1.33
ATG1YGL180W FRT1Q99332 602 aa6.77□□□□□ -1.33
ATG1YGL180W ENP1P38333 483 aaKnown RBP6.76□□□□□ -1.33
ATG1YGL180W BOL3P39724 118 aa6.76□□□□□ -1.33
ATG1YGL180W ALD3P54114 506 aa6.76□□□□□ -1.33
ATG1YGL180W PKH3Q03306 898 aaPredicted RBP6.76□□□□□ -1.33
ATG1YGL180W HAA1Q12753 694 aaKnown RBP6.76□□□□□ -1.33
ATG1YGL180W MNL2Q12205 849 aa6.75□□□□□ -1.33
ATG1YGL180W ECM23Q02710 187 aa6.74□□□□□ -1.33
ATG1YGL180W GUT1P32190 709 aa6.74□□□□□ -1.33
ATG1YGL180W RAD54P32863 898 aa6.74□□□□□ -1.33
ATG1YGL180W OYE2Q03558 400 aaKnown RBP6.74□□□□□ -1.33
ATG1YGL180W PDR1P12383 1068 aa6.73□□□□□ -1.33
ATG1YGL180W VMA1P17255 1071 aaKnown RBP6.73□□□□□ -1.33
ATG1YGL180W SPT5P27692 1063 aaKnown RBP6.73□□□□□ -1.33
ATG1YGL180W ILV3P39522 585 aaKnown RBP6.73□□□□□ -1.33
ATG1YGL180W TOM20P35180 183 aa6.73□□□□□ -1.33
ATG1YGL180W ALG12P53730 551 aa6.73□□□□□ -1.33
ATG1YGL180W BUD21Q08492 214 aaPredicted RBP6.73□□□□□ -1.33
ATG1YGL180W MMP1Q12372 583 aa6.73□□□□□ -1.33
ATG1YGL180W GRX4P32642 244 aa6.73□□□□□ -1.33
ATG1YGL180W YOR238WQ08634 303 aa6.73□□□□□ -1.33
ATG1YGL180W FYV10P40492 516 aa6.72□□□□□ -1.33
ATG1YGL180W RPN4Q03465 531 aa6.72□□□□□ -1.33
ATG1YGL180W MET1P36150 593 aa6.72□□□□□ -1.33
ATG1YGL180W GIN4Q12263 1142 aa6.72□□□□□ -1.33
ATG1YGL180W SSF2Q12153 453 aaPredicted RBP6.71□□□□□ -1.34
ATG1YGL180W PMC1P38929 1173 aaPredicted RBP6.71□□□□□ -1.34
ATG1YGL180W GPI13Q07830 1017 aa6.71□□□□□ -1.34
ATG1YGL180W GAL2P13181 574 aa6.7□□□□□ -1.34
ATG1YGL180W MAP2P38174 421 aaKnown RBP6.7□□□□□ -1.34
ATG1YGL180W ATG1P53104 897 aa6.7□□□□□ -1.34
ATG1YGL180W NUT2Q06213 157 aa6.7□□□□□ -1.34
ATG1YGL180W PUF6Q04373 656 aaKnown RBP6.7□□□□□ -1.34
ATG1YGL180W CLB5P30283 435 aa6.69□□□□□ -1.34
ATG1YGL180W NSR1P27476 414 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
ATG1YGL180W VAC8P39968 578 aa6.68□□□□□ -1.34
ATG1YGL180W RTF1P53064 558 aa6.68□□□□□ -1.34
ATG1YGL180W VPS16Q03308 798 aa6.68□□□□□ -1.34
ATG1YGL180W KIC1P38692 1080 aa6.67□□□□□ -1.34
ATG1YGL180W KAR5Q04746 504 aa6.67□□□□□ -1.34
ATG1YGL180W APL6P46682 809 aa6.67□□□□□ -1.34
ATG1YGL180W ROM1P53046 1155 aa6.67□□□□□ -1.34
ATG1YGL180W PPM2Q08282 695 aa6.67□□□□□ -1.34
ATG1YGL180W SAM3Q08986 587 aa6.67□□□□□ -1.34
ATG1YGL180W GRS1P38088 690 aaKnown RBP6.66□□□□□ -1.34
ATG1YGL180W UBX7P38349 436 aa6.66□□□□□ -1.34
ATG1YGL180W PIN2Q12057 282 aa6.66□□□□□ -1.34
ATG1YGL180W RRP14P36080 434 aaKnown RBP6.66□□□□□ -1.34
ATG1YGL180W JIP5Q06214 492 aaPredicted RBP6.66□□□□□ -1.34
ATG1YGL180W MCM16Q12262 181 aa6.66□□□□□ -1.34
ATG1YGL180W NAF1P53919 492 aaKnown RBP6.65□□□□□ -1.34
ATG1YGL180W NSE3Q05541 303 aa6.65□□□□□ -1.34
ATG1YGL180W GRE2Q12068 342 aaKnown RBP6.65□□□□□ -1.34
ATG1YGL180W ARG8P18544 423 aa6.65□□□□□ -1.35
ATG1YGL180W MTO1P53070 669 aa6.65□□□□□ -1.35
ATG1YGL180W MDG1P53885 366 aa6.65□□□□□ -1.35
ATG1YGL180W TSR4P25040 408 aa6.64□□□□□ -1.35
ATG1YGL180W SUB1P54000 292 aaKnown RBP6.64□□□□□ -1.35
ATG1YGL180W FPR3P38911 411 aaKnown RBP6.64□□□□□ -1.35
ATG1YGL180W ATH1P48016 1211 aa6.64□□□□□ -1.35
ATG1YGL180W ALD6P54115 500 aaKnown RBP6.64□□□□□ -1.35
ATG1YGL180W SVL3Q03088 825 aaKnown RBP6.64□□□□□ -1.35
ATG1YGL180W VPS72Q03388 795 aa6.64□□□□□ -1.35
ATG1YGL180W SPR28Q04921 423 aa6.63□□□□□ -1.35
ATG1YGL180W ZDS1P50111 915 aaKnown RBP6.63□□□□□ -1.35
ATG1YGL180W UBP10P53874 792 aaPredicted RBP6.63□□□□□ -1.35
ATG1YGL180W KTR2P33550 425 aa6.62□□□□□ -1.35
ATG1YGL180W PRY3P47033 881 aa6.62□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms