RNA–Protein interactions for RNA: YGL115W

SNF4, Transcript of Activating gamma subunit of the AMP-activated Snf1p kinase complex, yeastyeast

Gene SNF4, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF4YGL115W SNT2P53127 1403 aa9.55□□□□□ -0.88
SNF4YGL115W TY1B-BRQ12193 1756 aa9.54□□□□□ -0.88
SNF4YGL115W TY1B-GR3Q12316 1755 aa9.54□□□□□ -0.88
SNF4YGL115W TY1B-ORQ92393 1755 aa9.54□□□□□ -0.88
SNF4YGL115W VTH1P40438 1549 aa9.53□□□□□ -0.88
SNF4YGL115W VTH2P40890 1549 aa9.53□□□□□ -0.88
SNF4YGL115W SAP30P38429 201 aa9.53□□□□□ -0.88
SNF4YGL115W VPS15P22219 1454 aa9.53□□□□□ -0.88
SNF4YGL115W RTT106P40161 455 aa9.51□□□□□ -0.89
SNF4YGL115W YBT1P32386 1661 aa9.51□□□□□ -0.89
SNF4YGL115W ESC1Q03661 1658 aaKnown RBP9.5□□□□□ -0.89
SNF4YGL115W YDL129WQ07555 291 aa9.49□□□□□ -0.89
SNF4YGL115W SOL3P38858 249 aa9.48□□□□□ -0.89
SNF4YGL115W PDR10P51533 1564 aa9.48□□□□□ -0.89
SNF4YGL115W SPT7P35177 1332 aa9.48□□□□□ -0.89
SNF4YGL115W CAT8P39113 1433 aa9.48□□□□□ -0.89
SNF4YGL115W NST1P53935 1240 aa9.47□□□□□ -0.89
SNF4YGL115W TY1B-JR2P47100 1755 aaKnown RBP9.45□□□□□ -0.9
SNF4YGL115W TY1B-ER2Q03619 1755 aa9.45□□□□□ -0.9
SNF4YGL115W TY1B-MR1Q04214 1755 aa9.45□□□□□ -0.9
SNF4YGL115W TY1B-MR2Q04670 1755 aaKnown RBP9.45□□□□□ -0.9
SNF4YGL115W TY1B-LR1Q12088 1755 aaKnown RBP9.45□□□□□ -0.9
SNF4YGL115W TY1B-NL1Q12112 1755 aa9.45□□□□□ -0.9
SNF4YGL115W TY1B-GR1Q12141 1755 aa9.45□□□□□ -0.9
SNF4YGL115W TY1B-BLQ12490 1755 aa9.45□□□□□ -0.9
SNF4YGL115W DNF1P32660 1571 aa9.45□□□□□ -0.9
SNF4YGL115W PML39Q03760 334 aa9.44□□□□□ -0.9
SNF4YGL115W NUP159P40477 1460 aa9.44□□□□□ -0.9
SNF4YGL115W IRC20Q06554 1556 aa9.44□□□□□ -0.9
SNF4YGL115W GCN2P15442 1659 aa9.42□□□□□ -0.9
SNF4YGL115W GEA2P39993 1459 aaKnown RBP9.41□□□□□ -0.9
SNF4YGL115W SET1P38827 1080 aaKnown RBP9.41□□□□□ -0.9
SNF4YGL115W NOP53Q12080 455 aaKnown RBP9.41□□□□□ -0.9
SNF4YGL115W CDC25P04821 1589 aa9.41□□□□□ -0.9
SNF4YGL115W YDR344CQ05510 147 aa9.39□□□□□ -0.91
SNF4YGL115W PDR5P33302 1511 aaKnown RBP9.39□□□□□ -0.91
SNF4YGL115W SRB8P25648 1427 aa9.39□□□□□ -0.91
SNF4YGL115W PRS1P32895 427 aaKnown RBP9.38□□□□□ -0.91
SNF4YGL115W ILV3P39522 585 aaKnown RBP9.38□□□□□ -0.91
SNF4YGL115W MID1P41821 548 aa9.37□□□□□ -0.91
SNF4YGL115W MPH3P0CE00 602 aa9.36□□□□□ -0.91
SNF4YGL115W YGR273CP53329 174 aa9.36□□□□□ -0.91
SNF4YGL115W AI4P03878 556 aa9.34□□□□□ -0.91
SNF4YGL115W YLR419WQ06698 1435 aaKnown RBP9.33□□□□□ -0.92
SNF4YGL115W RPO21P04050 1733 aaKnown RBP9.31□□□□□ -0.92
SNF4YGL115W CHL1P22516 861 aaPredicted RBP9.31□□□□□ -0.92
SNF4YGL115W PRE3P38624 215 aa9.31□□□□□ -0.92
SNF4YGL115W MHP1P43638 1398 aa9.31□□□□□ -0.92
SNF4YGL115W ARO1P08566 1588 aaKnown RBP9.31□□□□□ -0.92
SNF4YGL115W NTE1Q04958 1679 aa9.3□□□□□ -0.92
SNF4YGL115W RQC2Q12532 1038 aaKnown RBP9.29□□□□□ -0.92
SNF4YGL115W GDB1Q06625 1536 aa9.29□□□□□ -0.92
SNF4YGL115W NOP7P53261 605 aaKnown RBP9.26□□□□□ -0.93
SNF4YGL115W ELP4Q02884 456 aaKnown RBP9.26□□□□□ -0.93
SNF4YGL115W PEX29Q03370 554 aa9.25□□□□□ -0.93
SNF4YGL115W IQG1Q12280 1495 aa9.25□□□□□ -0.93
SNF4YGL115W RPA190P10964 1664 aaKnown RBP9.25□□□□□ -0.93
SNF4YGL115W MMS1Q06211 1407 aa9.24□□□□□ -0.93
SNF4YGL115W PDR12Q02785 1511 aa9.23□□□□□ -0.93
SNF4YGL115W KEX1P09620 729 aa9.21□□□□□ -0.94
SNF4YGL115W ARH1P48360 493 aa9.21□□□□□ -0.94
SNF4YGL115W TY3B-IQ7LHG5 1498 aaKnown RBP9.21□□□□□ -0.94
SNF4YGL115W BCK2P33306 851 aa9.2□□□□□ -0.94
SNF4YGL115W SLI15P38283 698 aa9.2□□□□□ -0.94
SNF4YGL115W VHR2P40041 505 aa9.19□□□□□ -0.94
SNF4YGL115W BUD21Q08492 214 aaPredicted RBP9.19□□□□□ -0.94
SNF4YGL115W MPC54Q08550 464 aa9.18□□□□□ -0.94
SNF4YGL115W CKB1P43639 278 aa9.17□□□□□ -0.94
SNF4YGL115W UBP14P38237 781 aaKnown RBP9.16□□□□□ -0.94
SNF4YGL115W YLR326WQ06170 240 aaKnown RBP9.16□□□□□ -0.94
SNF4YGL115W YSP2Q06681 1438 aa9.15□□□□□ -0.94
SNF4YGL115W PAF1P38351 445 aa9.15□□□□□ -0.94
SNF4YGL115W YOR093CQ12275 1648 aa9.14□□□□□ -0.95
SNF4YGL115W MET10P39692 1035 aa9.14□□□□□ -0.95
SNF4YGL115W SPO14P36126 1683 aa9.13□□□□□ -0.95
SNF4YGL115W LEU3P08638 886 aa9.13□□□□□ -0.95
SNF4YGL115W VRP1P37370 817 aa9.13□□□□□ -0.95
SNF4YGL115W HAP5Q02516 242 aa9.13□□□□□ -0.95
SNF4YGL115W NUP157P40064 1391 aaKnown RBP9.11□□□□□ -0.95
SNF4YGL115W NMA111P53920 997 aa9.1□□□□□ -0.95
SNF4YGL115W BUD3P25558 1636 aa9.09□□□□□ -0.95
SNF4YGL115W LTE1P07866 1435 aa9.09□□□□□ -0.95
SNF4YGL115W SPT23P35210 1082 aa9.09□□□□□ -0.95
SNF4YGL115W PCS60P38137 543 aaKnown RBP RIP-Chip data9.09□□□□□ -0.95not detected
SNF4YGL115W PDS5Q04264 1277 aa9.09□□□□□ -0.95
SNF4YGL115W DPL1Q05567 589 aa9.09□□□□□ -0.95
SNF4YGL115W YPR148CQ06523 435 aa9.08□□□□□ -0.96
SNF4YGL115W CDC73Q06697 393 aa9.07□□□□□ -0.96
SNF4YGL115W RAV1P47104 1357 aa9.07□□□□□ -0.96
SNF4YGL115W RTC1Q08281 1341 aa9.06□□□□□ -0.96
SNF4YGL115W RAD54P32863 898 aa9.06□□□□□ -0.96
SNF4YGL115W VPS70P47161 811 aa9.06□□□□□ -0.96
SNF4YGL115W CHC1P22137 1653 aaKnown RBP9.06□□□□□ -0.96
SNF4YGL115W CFT1Q06632 1357 aaKnown RBP9.05□□□□□ -0.96
SNF4YGL115W SCT1P32784 759 aa9.05□□□□□ -0.96
SNF4YGL115W BNI4P53858 892 aa9.05□□□□□ -0.96
SNF4YGL115W YRF1-1P0CX20 1796 aa9.04□□□□□ -0.96
SNF4YGL115W YRF1-5P0CX21 1796 aa9.04□□□□□ -0.96
SNF4YGL115W YRF1-8P0CX22 1796 aa9.04□□□□□ -0.96
SNF4YGL115W RPP0P05317 312 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms