RNA–Protein interactions for RNA: YFR049W

YMR31, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene YMR31, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR31	YFR049W	MRX12	P47084	519 aa		4.05	□□□□□ -1.76
YMR31	YFR049W	MST1	P07236	462 aa		4.04	□□□□□ -1.76
YMR31	YFR049W	SIT4	P20604	311 aa		4.04	□□□□□ -1.76
YMR31	YFR049W	SPT5	P27692	1063 aa	Known RBP	4.04	□□□□□ -1.76
YMR31	YFR049W	SIS2	P36024	562 aa		4.04	□□□□□ -1.76
YMR31	YFR049W	TGL4	P36165	910 aa		4.04	□□□□□ -1.76
YMR31	YFR049W	KTR7	P40504	517 aa		4.04	□□□□□ -1.76
YMR31	YFR049W	SNU71	P53207	620 aa	Known RBP	4.04	□□□□□ -1.76
YMR31	YFR049W	WSC3	Q12215	556 aa		4.04	□□□□□ -1.76
YMR31	YFR049W	MAK16	P10962	306 aa	Predicted RBP	4.03	□□□□□ -1.76
YMR31	YFR049W	SSF1	P38789	453 aa	Predicted RBP	4.03	□□□□□ -1.76
YMR31	YFR049W	LAM6	Q08001	693 aa		4.03	□□□□□ -1.76
YMR31	YFR049W	YRR1	Q12172	810 aa		4.03	□□□□□ -1.76
YMR31	YFR049W	MSB4	Q12317	492 aa		4.03	□□□□□ -1.76
YMR31	YFR049W	SIS1	P25294	352 aa	Known RBP	4.02	□□□□□ -1.77
YMR31	YFR049W	HEM3	P28789	327 aa		4.02	□□□□□ -1.77
YMR31	YFR049W	RSC30	P38781	883 aa		4.02	□□□□□ -1.77
YMR31	YFR049W	RIM21	P48565	533 aa		4.02	□□□□□ -1.77
YMR31	YFR049W	YNL115C	P53925	644 aa		4.02	□□□□□ -1.77
YMR31	YFR049W	ECM23	Q02710	187 aa		4.02	□□□□□ -1.77
YMR31	YFR049W	MRX10	Q05648	414 aa		4.02	□□□□□ -1.77
YMR31	YFR049W	PTC4	P38089	393 aa		4.01	□□□□□ -1.77
YMR31	YFR049W	MET10	P39692	1035 aa		4.01	□□□□□ -1.77
YMR31	YFR049W	ENV9	Q08651	330 aa		4.01	□□□□□ -1.77
YMR31	YFR049W	TRM1	P15565	570 aa	Known RBP	4	□□□□□ -1.77
YMR31	YFR049W	RRN6	P32786	894 aa		4	□□□□□ -1.77
YMR31	YFR049W	YPP1	P46951	817 aa		4	□□□□□ -1.77
YMR31	YFR049W	TBF1	Q02457	562 aa		4	□□□□□ -1.77
YMR31	YFR049W	TRP5	P00931	707 aa	Known RBP	3.99	□□□□□ -1.77
YMR31	YFR049W	ISF1	P32488	338 aa		3.99	□□□□□ -1.77
YMR31	YFR049W	EAP1	P36041	632 aa	Known RBP	3.99	□□□□□ -1.77
YMR31	YFR049W	UBX7	P38349	436 aa		3.99	□□□□□ -1.77
YMR31	YFR049W	MID1	P41821	548 aa		3.99	□□□□□ -1.77
YMR31	YFR049W	PUS6	P53294	404 aa		3.99	□□□□□ -1.77
YMR31	YFR049W	SEN54	Q02825	467 aa	Predicted RBP	3.99	□□□□□ -1.77
YMR31	YFR049W	DPL1	Q05567	589 aa		3.99	□□□□□ -1.77
YMR31	YFR049W	KEX2	P13134	814 aa		3.98	□□□□□ -1.77
YMR31	YFR049W	RTF1	P53064	558 aa		3.98	□□□□□ -1.77
YMR31	YFR049W	IPL1	P38991	367 aa		3.97	□□□□□ -1.77
YMR31	YFR049W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
YMR31	YFR049W	ORC1	P54784	914 aa	Predicted RBP	3.97	□□□□□ -1.77
YMR31	YFR049W	JIP4	Q03361	876 aa		3.97	□□□□□ -1.77
YMR31	YFR049W	PEX29	Q03370	554 aa		3.97	□□□□□ -1.77
YMR31	YFR049W	PML39	Q03760	334 aa		3.97	□□□□□ -1.77
YMR31	YFR049W	ITT1	Q04638	464 aa		3.97	□□□□□ -1.77
YMR31	YFR049W	ERF2	Q06551	359 aa		3.97	□□□□□ -1.77
YMR31	YFR049W	MCM16	Q12262	181 aa		3.97	□□□□□ -1.77
YMR31	YFR049W	RDS2	P19541	446 aa	Known RBP	3.96	□□□□□ -1.78
YMR31	YFR049W	NUD1	P32336	851 aa		3.96	□□□□□ -1.78
YMR31	YFR049W	PEP12	P32854	288 aa		3.96	□□□□□ -1.78
YMR31	YFR049W	NPL4	P33755	580 aa		3.96	□□□□□ -1.78
YMR31	YFR049W	STM1	P39015	273 aa	Known RBP	3.96	□□□□□ -1.78
YMR31	YFR049W	EMP47	P43555	445 aa		3.96	□□□□□ -1.78
YMR31	YFR049W	NAF1	P53919	492 aa	Known RBP	3.96	□□□□□ -1.78
YMR31	YFR049W	MPC54	Q08550	464 aa		3.96	□□□□□ -1.78
YMR31	YFR049W	ISU2	Q12056	156 aa		3.96	□□□□□ -1.78
YMR31	YFR049W	YBL113C	Q7M4S9	792 aa		3.96	□□□□□ -1.78
YMR31	YFR049W	GAL2	P13181	574 aa		3.95	□□□□□ -1.78
YMR31	YFR049W	PAM1	P37304	830 aa	Known RBP	3.95	□□□□□ -1.78
YMR31	YFR049W	ULI1	P43604	169 aa		3.95	□□□□□ -1.78
YMR31	YFR049W	KAR5	Q04746	504 aa		3.95	□□□□□ -1.78
YMR31	YFR049W	SEC20	P28791	383 aa		3.94	□□□□□ -1.78
YMR31	YFR049W	ERP5	P38819	212 aa		3.94	□□□□□ -1.78
YMR31	YFR049W	NMA111	P53920	997 aa		3.94	□□□□□ -1.78
YMR31	YFR049W	YDL206W	Q12424	762 aa		3.94	□□□□□ -1.78
YMR31	YFR049W	ASF1	P32447	279 aa		3.93	□□□□□ -1.78
YMR31	YFR049W	YEL077C	Q3E7X8	1277 aa		3.93	□□□□□ -1.78
YMR31	YFR049W	GCD11	P32481	527 aa	Known RBP	3.92	□□□□□ -1.78
YMR31	YFR049W	GRS1	P38088	690 aa	Known RBP	3.92	□□□□□ -1.78
YMR31	YFR049W	THI12	P42883	340 aa		3.92	□□□□□ -1.78
YMR31	YFR049W	THI5	P43534	340 aa		3.92	□□□□□ -1.78
YMR31	YFR049W	THI11	P47183	340 aa		3.92	□□□□□ -1.78
YMR31	YFR049W	STE20	Q03497	939 aa	Known RBP	3.92	□□□□□ -1.78
YMR31	YFR049W	THI13	Q07748	340 aa		3.92	□□□□□ -1.78
YMR31	YFR049W	YBL029C-A	Q3E756	94 aa		3.92	□□□□□ -1.78
YMR31	YFR049W	PDR1	P12383	1068 aa		3.91	□□□□□ -1.78
YMR31	YFR049W	TEC1	P18412	486 aa		3.91	□□□□□ -1.78
YMR31	YFR049W	GUT2	P32191	649 aa		3.91	□□□□□ -1.78
YMR31	YFR049W	YHL050C	P38721	697 aa		3.91	□□□□□ -1.78
YMR31	YFR049W	YHR219W	P38900	624 aa		3.91	□□□□□ -1.78
YMR31	YFR049W	ATG3	P40344	310 aa		3.91	□□□□□ -1.78
YMR31	YFR049W	MSC6	Q08818	692 aa	Known RBP	3.91	□□□□□ -1.78
YMR31	YFR049W	PHO87	P25360	923 aa		3.9	□□□□□ -1.79
YMR31	YFR049W	TPS3	P38426	1054 aa	Known RBP	3.9	□□□□□ -1.79
YMR31	YFR049W	SOH1	P38633	127 aa		3.9	□□□□□ -1.79
YMR31	YFR049W	TIF11	P38912	153 aa	Known RBP	3.9	□□□□□ -1.79
YMR31	YFR049W	VNX1	P42839	908 aa		3.9	□□□□□ -1.79
YMR31	YFR049W	POL32	P47110	350 aa		3.9	□□□□□ -1.79
YMR31	YFR049W	ALD2	P47771	506 aa		3.9	□□□□□ -1.79
YMR31	YFR049W	ISM1	P48526	1002 aa		3.9	□□□□□ -1.79
YMR31	YFR049W	TUB4	P53378	473 aa		3.9	□□□□□ -1.79
YMR31	YFR049W	YNL035C	P53962	389 aa	Known RBP	3.9	□□□□□ -1.79
YMR31	YFR049W	PUN1	Q06991	263 aa		3.9	□□□□□ -1.79
YMR31	YFR049W	HAP4	P14064	554 aa		3.89	□□□□□ -1.79
YMR31	YFR049W	RAM1	P22007	431 aa		3.89	□□□□□ -1.79
YMR31	YFR049W	UBP9	P39967	754 aa		3.89	□□□□□ -1.79
YMR31	YFR049W	FIG4	P42837	879 aa		3.89	□□□□□ -1.79
YMR31	YFR049W	RPA14	P50106	137 aa		3.89	□□□□□ -1.79
YMR31	YFR049W	ACS2	P52910	683 aa	Known RBP	3.89	□□□□□ -1.79
YMR31	YFR049W	SPP1	Q03012	353 aa		3.89	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms