RNA–Protein interactions for RNA: YFR024C-A

LSB3, Transcript of Protein containing a C-terminal SH3 domain, yeastyeast

Gene LSB3, Length 1,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB3YFR024C-A REB1P21538 810 aa12.68□□□□□ -0.38
LSB3YFR024C-A PSK1P31374 1356 aa12.67□□□□□ -0.38
LSB3YFR024C-A YRF1-2P40105 1681 aa12.67□□□□□ -0.38
LSB3YFR024C-A TY4B-HP0C2J7 1802 aa12.66□□□□□ -0.38
LSB3YFR024C-A TY4B-JP47024 1803 aa12.66□□□□□ -0.38
LSB3YFR024C-A PPH3P32345 308 aa12.66□□□□□ -0.38
LSB3YFR024C-A DIP2Q12220 943 aaPredicted RBP12.66□□□□□ -0.38
LSB3YFR024C-A SCT1P32784 759 aa12.63□□□□□ -0.39
LSB3YFR024C-A ENT1Q12518 454 aa12.63□□□□□ -0.39
LSB3YFR024C-A YIL055CP40523 627 aaKnown RBP12.62□□□□□ -0.39
LSB3YFR024C-A ADE6P38972 1358 aaKnown RBP12.61□□□□□ -0.39
LSB3YFR024C-A PRP45P28004 379 aaPredicted RBP12.57□□□□□ -0.4
LSB3YFR024C-A ENV9Q08651 330 aa12.57□□□□□ -0.4
LSB3YFR024C-A ORC1P54784 914 aaPredicted RBP12.56□□□□□ -0.4
LSB3YFR024C-A GLN1P32288 370 aaKnown RBP12.55□□□□□ -0.4
LSB3YFR024C-A CHZ1P40019 153 aaPredicted RBP12.55□□□□□ -0.4
LSB3YFR024C-A IMH1Q06704 911 aaKnown RBP12.54□□□□□ -0.4
LSB3YFR024C-A PRP5P21372 849 aaPredicted RBP12.53□□□□□ -0.4
LSB3YFR024C-A MTR4P47047 1073 aaKnown RBP12.52□□□□□ -0.41
LSB3YFR024C-A LEU2P04173 364 aaPredicted RBP12.51□□□□□ -0.41
LSB3YFR024C-A PRI1P10363 409 aa12.51□□□□□ -0.41
LSB3YFR024C-A PRP43P53131 767 aaKnown RBP12.49□□□□□ -0.41
LSB3YFR024C-A YML133CQ03099 1374 aa12.48□□□□□ -0.41
LSB3YFR024C-A YLL067CQ07888 1374 aa12.48□□□□□ -0.41
LSB3YFR024C-A YLL066CQ99208 1374 aa12.48□□□□□ -0.41
LSB3YFR024C-A YMR074CQ04773 145 aa12.46□□□□□ -0.41
LSB3YFR024C-A CSE4P36012 229 aa12.45□□□□□ -0.42
LSB3YFR024C-A MSB3P48566 633 aaPredicted RBP12.45□□□□□ -0.42
LSB3YFR024C-A MLP1Q02455 1875 aaKnown RBP12.45□□□□□ -0.42
LSB3YFR024C-A URB1P34241 1764 aaKnown RBP12.43□□□□□ -0.42
LSB3YFR024C-A RPS24AP0CX31 135 aaKnown RBP12.42□□□□□ -0.42
LSB3YFR024C-A RPS24BP0CX32 135 aaKnown RBP12.42□□□□□ -0.42
LSB3YFR024C-A AVT3P36062 692 aa12.42□□□□□ -0.42
LSB3YFR024C-A POL5P39985 1022 aaKnown RBP12.42□□□□□ -0.42
LSB3YFR024C-A MHP1P43638 1398 aa12.41□□□□□ -0.42
LSB3YFR024C-A RSF2P46974 1380 aa12.41□□□□□ -0.42
LSB3YFR024C-A FKH1P40466 484 aa12.41□□□□□ -0.42
LSB3YFR024C-A TCB1Q12466 1186 aa12.41□□□□□ -0.42
LSB3YFR024C-A SLM3Q12093 417 aa12.4□□□□□ -0.42
LSB3YFR024C-A YIL177CP40434 1758 aa12.39□□□□□ -0.43
LSB3YFR024C-A YJL225CP40889 1758 aa12.39□□□□□ -0.43
LSB3YFR024C-A ISW2Q08773 1120 aa12.39□□□□□ -0.43
LSB3YFR024C-A FKS3Q04952 1785 aa12.38□□□□□ -0.43
LSB3YFR024C-A LEU3P08638 886 aa12.36□□□□□ -0.43
LSB3YFR024C-A IES2P40154 320 aa12.36□□□□□ -0.43
LSB3YFR024C-A APC1P53886 1748 aa12.35□□□□□ -0.43
LSB3YFR024C-A ROM2P51862 1356 aaKnown RBP12.35□□□□□ -0.43
LSB3YFR024C-A PDI1P17967 522 aaKnown RBP12.34□□□□□ -0.43
LSB3YFR024C-A RTG3P38165 486 aa12.33□□□□□ -0.44
LSB3YFR024C-A RTF1P53064 558 aa12.33□□□□□ -0.44
LSB3YFR024C-A AAD16Q02895 342 aa12.32□□□□□ -0.44
LSB3YFR024C-A YRF1-3P0CX14 1859 aa12.31□□□□□ -0.44
LSB3YFR024C-A YRF1-7P0CX15 1859 aa12.31□□□□□ -0.44
LSB3YFR024C-A YRF1-6P53819 1859 aa12.31□□□□□ -0.44
LSB3YFR024C-A EDE1P34216 1381 aa12.31□□□□□ -0.44
LSB3YFR024C-A BUD31P25337 157 aaPredicted RBP12.3□□□□□ -0.44
LSB3YFR024C-A ENP1P38333 483 aaKnown RBP12.3□□□□□ -0.44
LSB3YFR024C-A PDS5Q04264 1277 aa12.3□□□□□ -0.44
LSB3YFR024C-A DPS1P04802 557 aaKnown RBP12.29□□□□□ -0.44
LSB3YFR024C-A XKS1P42826 600 aa12.29□□□□□ -0.44
LSB3YFR024C-A TAP42Q04372 366 aa12.29□□□□□ -0.44
LSB3YFR024C-A RPG1P38249 964 aaKnown RBP12.28□□□□□ -0.44
LSB3YFR024C-A DOT5P40553 215 aa12.28□□□□□ -0.44
LSB3YFR024C-A UBP1P25037 809 aa12.27□□□□□ -0.45
LSB3YFR024C-A GRX4P32642 244 aa12.27□□□□□ -0.45
LSB3YFR024C-A GAS4Q08271 471 aa12.27□□□□□ -0.45
LSB3YFR024C-A AUS1Q08409 1394 aa12.25□□□□□ -0.45
LSB3YFR024C-A YEF3P16521 1044 aaKnown RBP12.25□□□□□ -0.45
LSB3YFR024C-A SEC3P33332 1336 aaKnown RBP12.24□□□□□ -0.45
LSB3YFR024C-A FOX2Q02207 900 aaKnown RBP12.24□□□□□ -0.45
LSB3YFR024C-A YKL133CP36066 463 aa12.23□□□□□ -0.45
LSB3YFR024C-A RPN11P43588 306 aaKnown RBP12.23□□□□□ -0.45
LSB3YFR024C-A SNF2P22082 1703 aa12.23□□□□□ -0.45
LSB3YFR024C-A SIR4P11978 1358 aa12.23□□□□□ -0.45
LSB3YFR024C-A PRY3P47033 881 aa12.19□□□□□ -0.46
LSB3YFR024C-A YJL181WP46987 611 aa12.18□□□□□ -0.46
LSB3YFR024C-A LAM6Q08001 693 aa12.18□□□□□ -0.46
LSB3YFR024C-A MEC3Q02574 474 aa12.18□□□□□ -0.46
LSB3YFR024C-A HIM1Q06674 414 aa12.18□□□□□ -0.46
LSB3YFR024C-A YRF1-4O13559 1382 aa12.17□□□□□ -0.46
LSB3YFR024C-A KAR2P16474 682 aaKnown RBP12.17□□□□□ -0.46
LSB3YFR024C-A PRP40P33203 583 aaKnown RBP12.17□□□□□ -0.46
LSB3YFR024C-A RPO41P13433 1351 aaKnown RBP12.16□□□□□ -0.46
LSB3YFR024C-A RCR1P38212 213 aa12.16□□□□□ -0.46
LSB3YFR024C-A COBP00163 385 aa12.15□□□□□ -0.46
LSB3YFR024C-A NPR2P39923 615 aa12.14□□□□□ -0.47
LSB3YFR024C-A YKR075CP36155 307 aa12.13□□□□□ -0.47
LSB3YFR024C-A FRK1Q03002 865 aaPredicted RBP12.11□□□□□ -0.47
LSB3YFR024C-A GTT3P39996 337 aa12.1□□□□□ -0.47
LSB3YFR024C-A ADE16P54113 591 aaKnown RBP12.1□□□□□ -0.47
LSB3YFR024C-A RIM15P43565 1770 aa12.08□□□□□ -0.48
LSB3YFR024C-A YBL086CP38177 466 aa12.08□□□□□ -0.48
LSB3YFR024C-A NST1P53935 1240 aa12.07□□□□□ -0.48
LSB3YFR024C-A LYS4P49367 693 aaPredicted RBP12.06□□□□□ -0.48
LSB3YFR024C-A TRK1P12685 1235 aa12.05□□□□□ -0.48
LSB3YFR024C-A ALD2P47771 506 aa12.05□□□□□ -0.48
LSB3YFR024C-A PAP2P53632 584 aaKnown RBP12.05□□□□□ -0.48
LSB3YFR024C-A ATG13Q06628 738 aa12.05□□□□□ -0.48
LSB3YFR024C-A UGA2P38067 497 aa12.05□□□□□ -0.48
LSB3YFR024C-A BUB1P41695 1021 aaKnown RBP RIP-Chip data12.05□□□□□ -0.48not detected
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms