RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeastyeast

Gene VMA3, Length 483 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA3YEL027W RRP5Q05022 1729 aaKnown RBP8.9□□□□□ -0.98
VMA3YEL027W RCM1P53972 490 aa8.89□□□□□ -0.99
VMA3YEL027W IMH1Q06704 911 aaKnown RBP8.89□□□□□ -0.99
VMA3YEL027W PRP45P28004 379 aaPredicted RBP8.87□□□□□ -0.99
VMA3YEL027W YRF1-2P40105 1681 aa8.87□□□□□ -0.99
VMA3YEL027W PPH3P32345 308 aa8.85□□□□□ -0.99
VMA3YEL027W PRI1P10363 409 aa8.84□□□□□ -0.99
VMA3YEL027W PRP5P21372 849 aaPredicted RBP8.82□□□□□ -1
VMA3YEL027W SPE2P21182 396 aa8.81□□□□□ -1
VMA3YEL027W TY4B-HP0C2J7 1802 aa8.81□□□□□ -1
VMA3YEL027W TY4B-JP47024 1803 aa8.81□□□□□ -1
VMA3YEL027W POL5P39985 1022 aaKnown RBP8.8□□□□□ -1
VMA3YEL027W PSK1P31374 1356 aa8.8□□□□□ -1
VMA3YEL027W ADE6P38972 1358 aaKnown RBP8.8□□□□□ -1
VMA3YEL027W KIP3P53086 805 aaKnown RBP8.79□□□□□ -1
VMA3YEL027W BUD31P25337 157 aaPredicted RBP8.78□□□□□ -1
VMA3YEL027W SCT1P32784 759 aa8.77□□□□□ -1.01
VMA3YEL027W ORC1P54784 914 aaPredicted RBP8.77□□□□□ -1.01
VMA3YEL027W LEU3P08638 886 aa8.76□□□□□ -1.01
VMA3YEL027W MSB3P48566 633 aaPredicted RBP8.76□□□□□ -1.01
VMA3YEL027W CHZ1P40019 153 aaPredicted RBP8.73□□□□□ -1.01
VMA3YEL027W LEU2P04173 364 aaPredicted RBP8.72□□□□□ -1.01
VMA3YEL027W IES2P40154 320 aa8.72□□□□□ -1.01
VMA3YEL027W MTR4P47047 1073 aaKnown RBP8.72□□□□□ -1.01
VMA3YEL027W TCB1Q12466 1186 aa8.72□□□□□ -1.01
VMA3YEL027W URB1P34241 1764 aaKnown RBP8.71□□□□□ -1.01
VMA3YEL027W UBP1P25037 809 aa8.71□□□□□ -1.02
VMA3YEL027W PRP43P53131 767 aaKnown RBP8.71□□□□□ -1.02
VMA3YEL027W YLR419WQ06698 1435 aaKnown RBP8.71□□□□□ -1.02
VMA3YEL027W CSE4P36012 229 aa8.7□□□□□ -1.02
VMA3YEL027W RSF2P46974 1380 aa8.7□□□□□ -1.02
VMA3YEL027W DOT5P40553 215 aa8.69□□□□□ -1.02
VMA3YEL027W RPN11P43588 306 aaKnown RBP8.69□□□□□ -1.02
VMA3YEL027W SLM3Q12093 417 aa8.69□□□□□ -1.02
VMA3YEL027W ROM2P51862 1356 aaKnown RBP8.69□□□□□ -1.02
VMA3YEL027W RPS24AP0CX31 135 aaKnown RBP8.68□□□□□ -1.02
VMA3YEL027W RPS24BP0CX32 135 aaKnown RBP8.68□□□□□ -1.02
VMA3YEL027W EDE1P34216 1381 aa8.67□□□□□ -1.02
VMA3YEL027W FOX2Q02207 900 aaKnown RBP8.65□□□□□ -1.02
VMA3YEL027W FKS3Q04952 1785 aa8.65□□□□□ -1.02
VMA3YEL027W MHP1P43638 1398 aa8.64□□□□□ -1.03
VMA3YEL027W YEF3P16521 1044 aaKnown RBP8.64□□□□□ -1.03
VMA3YEL027W ENP1P38333 483 aaKnown RBP8.64□□□□□ -1.03
VMA3YEL027W YML133CQ03099 1374 aa8.63□□□□□ -1.03
VMA3YEL027W YLL067CQ07888 1374 aa8.63□□□□□ -1.03
VMA3YEL027W YLL066CQ99208 1374 aa8.63□□□□□ -1.03
VMA3YEL027W YJL181WP46987 611 aa8.63□□□□□ -1.03
VMA3YEL027W YRF1-3P0CX14 1859 aa8.62□□□□□ -1.03
VMA3YEL027W YRF1-7P0CX15 1859 aa8.62□□□□□ -1.03
VMA3YEL027W YRF1-6P53819 1859 aa8.62□□□□□ -1.03
VMA3YEL027W YBL086CP38177 466 aa8.62□□□□□ -1.03
VMA3YEL027W YKL133CP36066 463 aa8.61□□□□□ -1.03
VMA3YEL027W NPR2P39923 615 aa8.61□□□□□ -1.03
VMA3YEL027W GTT3P39996 337 aa8.61□□□□□ -1.03
VMA3YEL027W XKS1P42826 600 aa8.61□□□□□ -1.03
VMA3YEL027W PDS5Q04264 1277 aa8.61□□□□□ -1.03
VMA3YEL027W LAM6Q08001 693 aa8.61□□□□□ -1.03
VMA3YEL027W PRP40P33203 583 aaKnown RBP8.6□□□□□ -1.03
VMA3YEL027W FKH1P40466 484 aa8.6□□□□□ -1.03
VMA3YEL027W YIL177CP40434 1758 aa8.6□□□□□ -1.03
VMA3YEL027W YJL225CP40889 1758 aa8.6□□□□□ -1.03
VMA3YEL027W UGA2P38067 497 aa8.59□□□□□ -1.03
VMA3YEL027W APC1P53886 1748 aa8.59□□□□□ -1.03
VMA3YEL027W LYS4P49367 693 aaPredicted RBP8.58□□□□□ -1.04
VMA3YEL027W COBP00163 385 aa8.57□□□□□ -1.04
VMA3YEL027W ALD2P47771 506 aa8.57□□□□□ -1.04
VMA3YEL027W DPS1P04802 557 aaKnown RBP8.56□□□□□ -1.04
VMA3YEL027W YKR075CP36155 307 aa8.56□□□□□ -1.04
VMA3YEL027W RTG3P38165 486 aa8.56□□□□□ -1.04
VMA3YEL027W RTF1P53064 558 aa8.56□□□□□ -1.04
VMA3YEL027W PDI1P17967 522 aaKnown RBP8.55□□□□□ -1.04
VMA3YEL027W GAS4Q08271 471 aa8.55□□□□□ -1.04
VMA3YEL027W YRF1-4O13559 1382 aa8.55□□□□□ -1.04
VMA3YEL027W SEC3P33332 1336 aaKnown RBP8.54□□□□□ -1.04
VMA3YEL027W MLP1Q02455 1875 aaKnown RBP8.54□□□□□ -1.04
VMA3YEL027W SSA2P10592 639 aaKnown RBP8.54□□□□□ -1.04
VMA3YEL027W MEC3Q02574 474 aa8.54□□□□□ -1.04
VMA3YEL027W CTH1P47976 325 aa8.52□□□□□ -1.05
VMA3YEL027W SIR4P11978 1358 aa8.51□□□□□ -1.05
VMA3YEL027W RCR1P38212 213 aa8.51□□□□□ -1.05
VMA3YEL027W FRK1Q03002 865 aaPredicted RBP8.51□□□□□ -1.05
VMA3YEL027W SNF2P22082 1703 aa8.5□□□□□ -1.05
VMA3YEL027W GRX4P32642 244 aa8.5□□□□□ -1.05
VMA3YEL027W TAP42Q04372 366 aa8.5□□□□□ -1.05
VMA3YEL027W PSD2P53037 1138 aaKnown RBP8.49□□□□□ -1.05
VMA3YEL027W ADE16P54113 591 aaKnown RBP8.49□□□□□ -1.05
VMA3YEL027W AUS1Q08409 1394 aa8.48□□□□□ -1.05
VMA3YEL027W SPT7P35177 1332 aa8.47□□□□□ -1.05
VMA3YEL027W BDF1P35817 686 aa8.45□□□□□ -1.06
VMA3YEL027W ATG13Q06628 738 aa8.45□□□□□ -1.06
VMA3YEL027W HIM1Q06674 414 aa8.45□□□□□ -1.06
VMA3YEL027W MSB4Q12317 492 aa8.45□□□□□ -1.06
VMA3YEL027W RPO41P13433 1351 aaKnown RBP8.45□□□□□ -1.06
VMA3YEL027W SSA1P10591 642 aaKnown RBP8.44□□□□□ -1.06
VMA3YEL027W NST1P53935 1240 aa8.43□□□□□ -1.06
VMA3YEL027W ALD3P54114 506 aa8.43□□□□□ -1.06
VMA3YEL027W RIM15P43565 1770 aa8.41□□□□□ -1.06
VMA3YEL027W KAR2P16474 682 aaKnown RBP8.41□□□□□ -1.06
VMA3YEL027W RPG1P38249 964 aaKnown RBP8.41□□□□□ -1.06
VMA3YEL027W INP54Q08227 384 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms