RNA–Protein interactions for RNA: YDR400W

URH1, Transcript of Uridine nucleosidase (uridine-cytidine N-ribohydrolase), yeast

Gene URH1, Length 1,023 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URH1	YDR400W	BIM1	P40013	344 aa		11.62	□□□□□ -0.55
URH1	YDR400W	YDR344C	Q05510	147 aa		11.62	□□□□□ -0.55
URH1	YDR400W	PDR1	P12383	1068 aa		11.61	□□□□□ -0.55
URH1	YDR400W	NUD1	P32336	851 aa		11.6	□□□□□ -0.55
URH1	YDR400W	YBL036C	P38197	257 aa		11.6	□□□□□ -0.55
URH1	YDR400W	SLY41	P22215	453 aa		11.59	□□□□□ -0.55
URH1	YDR400W	ATG32	P40458	529 aa		11.59	□□□□□ -0.55
URH1	YDR400W	HAP5	Q02516	242 aa		11.59	□□□□□ -0.55
URH1	YDR400W	KEX2	P13134	814 aa		11.57	□□□□□ -0.56
URH1	YDR400W	YNL115C	P53925	644 aa		11.57	□□□□□ -0.56
URH1	YDR400W	SPA2	P23201	1466 aa	Known RBP	11.57	□□□□□ -0.56
URH1	YDR400W	ARG8	P18544	423 aa		11.56	□□□□□ -0.56
URH1	YDR400W	SSN2	P38931	1420 aa		11.56	□□□□□ -0.56
URH1	YDR400W	ARH1	P48360	493 aa		11.56	□□□□□ -0.56
URH1	YDR400W	RTF1	P53064	558 aa		11.56	□□□□□ -0.56
URH1	YDR400W	ERF2	Q06551	359 aa		11.56	□□□□□ -0.56
URH1	YDR400W	AIR2	Q12476	344 aa	Known RBP	11.56	□□□□□ -0.56
URH1	YDR400W	BIO2	P32451	375 aa		11.54	□□□□□ -0.56
URH1	YDR400W	TY1B-DR4	Q07793	1604 aa		11.52	□□□□□ -0.57
URH1	YDR400W	STR2	P47164	639 aa		11.51	□□□□□ -0.57
URH1	YDR400W	NPL4	P33755	580 aa		11.5	□□□□□ -0.57
URH1	YDR400W	RSC30	P38781	883 aa		11.5	□□□□□ -0.57
URH1	YDR400W	ISM1	P48526	1002 aa		11.5	□□□□□ -0.57
URH1	YDR400W	TIF1	P10081	395 aa	Known RBP	11.48	□□□□□ -0.57
URH1	YDR400W	RPL34B	P40525	121 aa	Known RBP	11.48	□□□□□ -0.57
URH1	YDR400W	ELP4	Q02884	456 aa	Known RBP	11.48	□□□□□ -0.57
URH1	YDR400W	LAM6	Q08001	693 aa		11.48	□□□□□ -0.57
URH1	YDR400W	ERG12	P07277	443 aa		11.47	□□□□□ -0.57
URH1	YDR400W	TRM1	P15565	570 aa	Known RBP	11.47	□□□□□ -0.57
URH1	YDR400W	CSE4	P36012	229 aa		11.47	□□□□□ -0.57
URH1	YDR400W	BNI4	P53858	892 aa		11.46	□□□□□ -0.57
URH1	YDR400W	RAM1	P22007	431 aa		11.45	□□□□□ -0.58
URH1	YDR400W	YNL108C	P53929	270 aa		11.45	□□□□□ -0.58
URH1	YDR400W	MON2	P48563	1636 aa	Predicted RBP	11.42	□□□□□ -0.58
URH1	YDR400W	TY1A-DR4	O74302	440 aa		11.42	□□□□□ -0.58
URH1	YDR400W	TY1A-H	P0C2I4	478 aa	Known RBP	11.42	□□□□□ -0.58
URH1	YDR400W	TY1A-A	P0CX57	440 aa		11.42	□□□□□ -0.58
URH1	YDR400W	TY1A-PR1	P0CX58	440 aa		11.42	□□□□□ -0.58
URH1	YDR400W	TY1A-OR	P0CX59	440 aa		11.42	□□□□□ -0.58
URH1	YDR400W	TY1A-PR2	P0CX60	440 aa		11.42	□□□□□ -0.58
URH1	YDR400W	TY1A-DR5	P0CX65	440 aa		11.42	□□□□□ -0.58
URH1	YDR400W	TY1A-ER2	P0CX66	440 aa		11.42	□□□□□ -0.58
URH1	YDR400W	TY1A-GR3	P0CX67	440 aa		11.42	□□□□□ -0.58
URH1	YDR400W	TY1A-LR1	P0CX68	440 aa		11.42	□□□□□ -0.58
URH1	YDR400W	TY1A-MR2	P0CX69	440 aa		11.42	□□□□□ -0.58
URH1	YDR400W	TY1A-JR2	P47099	440 aa		11.42	□□□□□ -0.58
URH1	YDR400W	PUS6	P53294	404 aa		11.42	□□□□□ -0.58
URH1	YDR400W	TY1A-DR1	Q03856	440 aa		11.42	□□□□□ -0.58
URH1	YDR400W	TY1A-ML1	Q04706	440 aa	Known RBP	11.42	□□□□□ -0.58
URH1	YDR400W	TY1A-BR	Q12217	440 aa		11.42	□□□□□ -0.58
URH1	YDR400W	TY1A-NL2	Q12470	440 aa		11.42	□□□□□ -0.58
URH1	YDR400W	TY1A-GR2	Q12485	440 aa		11.42	□□□□□ -0.58
URH1	YDR400W	GCD11	P32481	527 aa	Known RBP	11.41	□□□□□ -0.58
URH1	YDR400W	SPT23	P35210	1082 aa		11.41	□□□□□ -0.58
URH1	YDR400W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.41	□□□□□ -0.58	not detected
URH1	YDR400W	MAK16	P10962	306 aa	Predicted RBP	11.4	□□□□□ -0.58
URH1	YDR400W	BUD20	Q08004	166 aa	Predicted RBP	11.4	□□□□□ -0.58
URH1	YDR400W	SEC2	P17065	759 aa		11.39	□□□□□ -0.59
URH1	YDR400W	YPR204W	Q08995	1032 aa		11.39	□□□□□ -0.59
URH1	YDR400W	YPR015C	Q12531	247 aa		11.39	□□□□□ -0.59
URH1	YDR400W	YDJ1	P25491	409 aa	Known RBP	11.38	□□□□□ -0.59
URH1	YDR400W	RTG2	P32608	588 aa	Known RBP	11.38	□□□□□ -0.59
URH1	YDR400W	AGE1	Q04412	482 aa		11.38	□□□□□ -0.59
URH1	YDR400W	BMT6	Q12291	365 aa		11.38	□□□□□ -0.59
URH1	YDR400W	SUP45	P12385	437 aa	Known RBP	11.37	□□□□□ -0.59
URH1	YDR400W	PTC2	P39966	464 aa	Known RBP	11.37	□□□□□ -0.59
URH1	YDR400W	TBF1	Q02457	562 aa		11.37	□□□□□ -0.59
URH1	YDR400W	TUB4	P53378	473 aa		11.36	□□□□□ -0.59
URH1	YDR400W	SIS1	P25294	352 aa	Known RBP	11.35	□□□□□ -0.59
URH1	YDR400W	PRE3	P38624	215 aa		11.34	□□□□□ -0.59
URH1	YDR400W	ENO2	P00925	437 aa	Known RBP	11.33	□□□□□ -0.6
URH1	YDR400W	SPT5	P27692	1063 aa	Known RBP	11.33	□□□□□ -0.6
URH1	YDR400W	YDL206W	Q12424	762 aa		11.33	□□□□□ -0.6
URH1	YDR400W	YJL171C	P46992	396 aa		11.32	□□□□□ -0.6
URH1	YDR400W	SUB2	Q07478	446 aa	Known RBP	11.32	□□□□□ -0.6
URH1	YDR400W	CPS1	P27614	576 aa		11.3	□□□□□ -0.6
URH1	YDR400W	PRT1	P06103	763 aa	Known RBP	11.29	□□□□□ -0.6
URH1	YDR400W	YML082W	Q04533	649 aa	Known RBP	11.29	□□□□□ -0.6
URH1	YDR400W	TTI1	P36097	1038 aa		11.28	□□□□□ -0.6
URH1	YDR400W	HSL1	P34244	1518 aa		11.28	□□□□□ -0.6
URH1	YDR400W	ENO1	P00924	437 aa	Known RBP	11.27	□□□□□ -0.61
URH1	YDR400W	PAC1	P39946	494 aa	Known RBP	11.27	□□□□□ -0.61
URH1	YDR400W	SSA4	P22202	642 aa	Known RBP	11.26	□□□□□ -0.61
URH1	YDR400W	RRN7	P40992	514 aa		11.25	□□□□□ -0.61
URH1	YDR400W	RIM21	P48565	533 aa		11.25	□□□□□ -0.61
URH1	YDR400W	RPA14	P50106	137 aa		11.25	□□□□□ -0.61
URH1	YDR400W	NAF1	P53919	492 aa	Known RBP	11.25	□□□□□ -0.61
URH1	YDR400W	CHL1	P22516	861 aa	Predicted RBP	11.24	□□□□□ -0.61
URH1	YDR400W	SPT6	P23615	1451 aa	Known RBP	11.24	□□□□□ -0.61
URH1	YDR400W	MRX10	Q05648	414 aa		11.23	□□□□□ -0.61
URH1	YDR400W	SWR1	Q05471	1514 aa		11.23	□□□□□ -0.61
URH1	YDR400W	MCM16	Q12262	181 aa		11.22	□□□□□ -0.61
URH1	YDR400W	SSA1	P10591	642 aa	Known RBP	11.21	□□□□□ -0.61
URH1	YDR400W	YPR097W	Q06839	1073 aa		11.21	□□□□□ -0.61
URH1	YDR400W	ALR1	Q08269	859 aa		11.2	□□□□□ -0.62
URH1	YDR400W	PDC1	P06169	563 aa	Known RBP	11.19	□□□□□ -0.62
URH1	YDR400W	ISF1	P32488	338 aa		11.17	□□□□□ -0.62
URH1	YDR400W	PAT1	P25644	796 aa	Known RBP	11.16	□□□□□ -0.62
URH1	YDR400W	SPT16	P32558	1035 aa	Known RBP	11.16	□□□□□ -0.62
URH1	YDR400W	YPP1	P46951	817 aa		11.16	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms