RNA–Protein interactions for RNA: YDR297W

SUR2, Transcript of Sphinganine C4-hydroxylase, yeastyeast

Gene SUR2, Length 1,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUR2YDR297W RCR1P38212 213 aa6.36□□□□□ -1.39
SUR2YDR297W NOP7P53261 605 aaKnown RBP6.36□□□□□ -1.39
SUR2YDR297W YRF1-1P0CX20 1796 aa6.36□□□□□ -1.39
SUR2YDR297W YRF1-5P0CX21 1796 aa6.36□□□□□ -1.39
SUR2YDR297W YRF1-8P0CX22 1796 aa6.36□□□□□ -1.39
SUR2YDR297W PDR12Q02785 1511 aa6.35□□□□□ -1.39
SUR2YDR297W GDB1Q06625 1536 aa6.35□□□□□ -1.39
SUR2YDR297W VPS15P22219 1454 aa6.34□□□□□ -1.39
SUR2YDR297W CAT8P39113 1433 aa6.34□□□□□ -1.39
SUR2YDR297W SPO14P36126 1683 aa6.34□□□□□ -1.39
SUR2YDR297W PBS2P08018 668 aa6.34□□□□□ -1.39
SUR2YDR297W CAB3P36076 571 aa6.33□□□□□ -1.4
SUR2YDR297W SLX8P40072 274 aa6.33□□□□□ -1.4
SUR2YDR297W YML020WQ03722 664 aa6.33□□□□□ -1.4
SUR2YDR297W SSA1P10591 642 aaKnown RBP6.32□□□□□ -1.4
SUR2YDR297W MNN4P36044 1178 aa6.32□□□□□ -1.4
SUR2YDR297W PDR10P51533 1564 aa6.31□□□□□ -1.4
SUR2YDR297W SLD2P34252 453 aa6.31□□□□□ -1.4
SUR2YDR297W STS1P38637 319 aa6.31□□□□□ -1.4
SUR2YDR297W RTT106P40161 455 aa6.31□□□□□ -1.4
SUR2YDR297W RPS0BP46654 252 aaKnown RBP6.31□□□□□ -1.4
SUR2YDR297W MAK21Q12176 1025 aaKnown RBP6.31□□□□□ -1.4
SUR2YDR297W ARO1P08566 1588 aaKnown RBP6.31□□□□□ -1.4
SUR2YDR297W TOP1P04786 769 aa6.3□□□□□ -1.4
SUR2YDR297W GEF1P37020 779 aa6.3□□□□□ -1.4
SUR2YDR297W YFR006WP43590 535 aa6.3□□□□□ -1.4
SUR2YDR297W SPP1Q03012 353 aa6.3□□□□□ -1.4
SUR2YDR297W NOP8Q08287 484 aaPredicted RBP6.3□□□□□ -1.4
SUR2YDR297W SSM4P40318 1319 aa6.28□□□□□ -1.4
SUR2YDR297W KRI1P42846 591 aaKnown RBP6.28□□□□□ -1.4
SUR2YDR297W HPC2Q01448 625 aa6.28□□□□□ -1.4
SUR2YDR297W MAM3Q12296 706 aa6.28□□□□□ -1.4
SUR2YDR297W DBP1P24784 617 aaKnown RBP6.26□□□□□ -1.41
SUR2YDR297W RTG3P38165 486 aa6.26□□□□□ -1.41
SUR2YDR297W GTT3P39996 337 aa6.26□□□□□ -1.41
SUR2YDR297W YMR1P47147 688 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
SUR2YDR297W ORC1P54784 914 aaPredicted RBP6.26□□□□□ -1.41
SUR2YDR297W NUP157P40064 1391 aaKnown RBP6.26□□□□□ -1.41
SUR2YDR297W RAM2P29703 316 aa6.25□□□□□ -1.41
SUR2YDR297W TIF11P38912 153 aaKnown RBP6.25□□□□□ -1.41
SUR2YDR297W ATF2P53296 535 aa6.25□□□□□ -1.41
SUR2YDR297W SRB8P25648 1427 aa6.25□□□□□ -1.41
SUR2YDR297W SNU71P53207 620 aaKnown RBP6.24□□□□□ -1.41
SUR2YDR297W LTE1P07866 1435 aa6.24□□□□□ -1.41
SUR2YDR297W IQG1Q12280 1495 aa6.23□□□□□ -1.41
SUR2YDR297W GLC3P32775 704 aa6.23□□□□□ -1.41
SUR2YDR297W BRL1P38770 471 aa6.23□□□□□ -1.41
SUR2YDR297W MET10P39692 1035 aa6.23□□□□□ -1.41
SUR2YDR297W IOC2Q12072 812 aa6.23□□□□□ -1.41
SUR2YDR297W NOP53Q12080 455 aaKnown RBP6.23□□□□□ -1.41
SUR2YDR297W BUD3P25558 1636 aa6.22□□□□□ -1.41
SUR2YDR297W FKH1P40466 484 aa6.22□□□□□ -1.41
SUR2YDR297W AIR2Q12476 344 aaKnown RBP6.22□□□□□ -1.41
SUR2YDR297W VMA1P17255 1071 aaKnown RBP6.21□□□□□ -1.42
SUR2YDR297W GUA1P38625 525 aaKnown RBP6.21□□□□□ -1.42
SUR2YDR297W YOL036WQ08206 761 aa6.21□□□□□ -1.42
SUR2YDR297W GCN2P15442 1659 aa6.2□□□□□ -1.42
SUR2YDR297W CHC1P22137 1653 aaKnown RBP6.2□□□□□ -1.42
SUR2YDR297W DOP1Q03921 1698 aa6.2□□□□□ -1.42
SUR2YDR297W TRM3Q07527 1436 aa6.19□□□□□ -1.42
SUR2YDR297W MAK11P20484 414 aaKnown RBP6.19□□□□□ -1.42
SUR2YDR297W SSA4P22202 642 aaKnown RBP6.19□□□□□ -1.42
SUR2YDR297W REF2P42073 533 aaPredicted RBP6.19□□□□□ -1.42
SUR2YDR297W ULI1P43604 169 aa6.19□□□□□ -1.42
SUR2YDR297W SSA2P10592 639 aaKnown RBP6.18□□□□□ -1.42
SUR2YDR297W SET4P42948 560 aa6.18□□□□□ -1.42
SUR2YDR297W SUB2Q07478 446 aaKnown RBP6.18□□□□□ -1.42
SUR2YDR297W LDB19Q12502 818 aa6.18□□□□□ -1.42
SUR2YDR297W YSP2Q06681 1438 aa6.17□□□□□ -1.42
SUR2YDR297W IES2P40154 320 aa6.17□□□□□ -1.42
SUR2YDR297W MMS1Q06211 1407 aa6.16□□□□□ -1.42
SUR2YDR297W SAM3Q08986 587 aa6.16□□□□□ -1.42
SUR2YDR297W YOR093CQ12275 1648 aa6.15□□□□□ -1.42
SUR2YDR297W DRS2P39524 1355 aa6.15□□□□□ -1.43
SUR2YDR297W TRP5P00931 707 aaKnown RBP6.13□□□□□ -1.43
SUR2YDR297W NUP42P49686 430 aaKnown RBP6.13□□□□□ -1.43
SUR2YDR297W RPL34AP87262 121 aaPredicted RBP6.13□□□□□ -1.43
SUR2YDR297W TFB3Q03290 321 aa6.13□□□□□ -1.43
SUR2YDR297W SEC7P11075 2009 aaKnown RBP6.12□□□□□ -1.43
SUR2YDR297W DIT2P21595 489 aa6.12□□□□□ -1.43
SUR2YDR297W HEM3P28789 327 aa6.12□□□□□ -1.43
SUR2YDR297W MSB4Q12317 492 aa6.12□□□□□ -1.43
SUR2YDR297W PDR5P33302 1511 aaKnown RBP6.11□□□□□ -1.43
SUR2YDR297W RPL34BP40525 121 aaKnown RBP6.11□□□□□ -1.43
SUR2YDR297W BNR1P40450 1375 aa6.1□□□□□ -1.43
SUR2YDR297W BNI1P41832 1953 aa6.1□□□□□ -1.43
SUR2YDR297W COX6P00427 148 aa6.1□□□□□ -1.43
SUR2YDR297W DNF2Q12675 1612 aa6.08□□□□□ -1.44
SUR2YDR297W ASF1P32447 279 aa6.08□□□□□ -1.44
SUR2YDR297W BUD21Q08492 214 aaPredicted RBP6.08□□□□□ -1.44
SUR2YDR297W VMR1P38735 1592 aa6.08□□□□□ -1.44
SUR2YDR297W CDC3P32457 520 aaKnown RBP6.07□□□□□ -1.44
SUR2YDR297W RTG1P32607 177 aa6.07□□□□□ -1.44
SUR2YDR297W EDS1P38073 919 aa6.07□□□□□ -1.44
SUR2YDR297W NUP188P52593 1655 aaKnown RBP6.07□□□□□ -1.44
SUR2YDR297W COQ8P27697 501 aa6.06□□□□□ -1.44
SUR2YDR297W YJL171CP46992 396 aa6.06□□□□□ -1.44
SUR2YDR297W MRX12P47084 519 aa6.06□□□□□ -1.44
SUR2YDR297W EAP1P36041 632 aaKnown RBP6.05□□□□□ -1.44
SUR2YDR297W BIM1P40013 344 aa6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms