RNA–Protein interactions for RNA: YDR257C

RKM4, Transcript of Ribosomal lysine methyltransferase, yeastyeast

Gene RKM4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKM4YDR257C NUD1P32336 851 aa9.02□□□□□ -0.97
RKM4YDR257C SLY41P22215 453 aa9.01□□□□□ -0.97
RKM4YDR257C SAP30P38429 201 aa9.01□□□□□ -0.97
RKM4YDR257C ARH1P48360 493 aa9.01□□□□□ -0.97
RKM4YDR257C YJU3P28321 313 aa9□□□□□ -0.97
RKM4YDR257C CSE4P36012 229 aa9□□□□□ -0.97
RKM4YDR257C ARG8P18544 423 aa8.99□□□□□ -0.97
RKM4YDR257C NPL4P33755 580 aa8.99□□□□□ -0.97
RKM4YDR257C RPL34BP40525 121 aaKnown RBP8.98□□□□□ -0.97
RKM4YDR257C ATG32P40458 529 aa8.97□□□□□ -0.97
RKM4YDR257C PDR1P12383 1068 aa8.96□□□□□ -0.97
RKM4YDR257C LAM6Q08001 693 aa8.96□□□□□ -0.97
RKM4YDR257C KEX2P13134 814 aa8.96□□□□□ -0.98
RKM4YDR257C AIR2Q12476 344 aaKnown RBP8.95□□□□□ -0.98
RKM4YDR257C BNI4P53858 892 aa8.94□□□□□ -0.98
RKM4YDR257C TIF1P10081 395 aaKnown RBP8.93□□□□□ -0.98
RKM4YDR257C BIO2P32451 375 aa8.93□□□□□ -0.98
RKM4YDR257C RSC30P38781 883 aa8.93□□□□□ -0.98
RKM4YDR257C ELP4Q02884 456 aaKnown RBP8.93□□□□□ -0.98
RKM4YDR257C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.92□□□□□ -0.98not detected
RKM4YDR257C PUS6P53294 404 aa8.91□□□□□ -0.98
RKM4YDR257C ERF2Q06551 359 aa8.91□□□□□ -0.98
RKM4YDR257C TRM1P15565 570 aaKnown RBP8.9□□□□□ -0.98
RKM4YDR257C SPT23P35210 1082 aa8.9□□□□□ -0.98
RKM4YDR257C STR2P47164 639 aa8.9□□□□□ -0.98
RKM4YDR257C ISM1P48526 1002 aa8.9□□□□□ -0.98
RKM4YDR257C SPT5P27692 1063 aaKnown RBP8.89□□□□□ -0.99
RKM4YDR257C YDR344CQ05510 147 aa8.89□□□□□ -0.99
RKM4YDR257C MAK16P10962 306 aaPredicted RBP8.89□□□□□ -0.99
RKM4YDR257C TBF1Q02457 562 aa8.89□□□□□ -0.99
RKM4YDR257C YNL108CP53929 270 aa8.88□□□□□ -0.99
RKM4YDR257C GCD11P32481 527 aaKnown RBP8.87□□□□□ -0.99
RKM4YDR257C PTC2P39966 464 aaKnown RBP8.87□□□□□ -0.99
RKM4YDR257C ERG12P07277 443 aa8.86□□□□□ -0.99
RKM4YDR257C RAM1P22007 431 aa8.86□□□□□ -0.99
RKM4YDR257C RTG2P32608 588 aaKnown RBP8.86□□□□□ -0.99
RKM4YDR257C BMT6Q12291 365 aa8.86□□□□□ -0.99
RKM4YDR257C SUP45P12385 437 aaKnown RBP8.84□□□□□ -0.99
RKM4YDR257C YJL171CP46992 396 aa8.84□□□□□ -0.99
RKM4YDR257C YPR204WQ08995 1032 aa8.84□□□□□ -0.99
RKM4YDR257C PRE3P38624 215 aa8.83□□□□□ -1
RKM4YDR257C BUD20Q08004 166 aaPredicted RBP8.83□□□□□ -1
RKM4YDR257C TY1A-DR4O74302 440 aa8.82□□□□□ -1
RKM4YDR257C TY1A-HP0C2I4 478 aaKnown RBP8.82□□□□□ -1
RKM4YDR257C TY1A-AP0CX57 440 aa8.82□□□□□ -1
RKM4YDR257C TY1A-PR1P0CX58 440 aa8.82□□□□□ -1
RKM4YDR257C TY1A-ORP0CX59 440 aa8.82□□□□□ -1
RKM4YDR257C TY1A-PR2P0CX60 440 aa8.82□□□□□ -1
RKM4YDR257C TY1A-DR5P0CX65 440 aa8.82□□□□□ -1
RKM4YDR257C TY1A-ER2P0CX66 440 aa8.82□□□□□ -1
RKM4YDR257C TY1A-GR3P0CX67 440 aa8.82□□□□□ -1
RKM4YDR257C TY1A-LR1P0CX68 440 aa8.82□□□□□ -1
RKM4YDR257C TY1A-MR2P0CX69 440 aa8.82□□□□□ -1
RKM4YDR257C SSA4P22202 642 aaKnown RBP8.82□□□□□ -1
RKM4YDR257C SIS1P25294 352 aaKnown RBP8.82□□□□□ -1
RKM4YDR257C TY1A-JR2P47099 440 aa8.82□□□□□ -1
RKM4YDR257C TUB4P53378 473 aa8.82□□□□□ -1
RKM4YDR257C TY1A-DR1Q03856 440 aa8.82□□□□□ -1
RKM4YDR257C TY1A-ML1Q04706 440 aaKnown RBP8.82□□□□□ -1
RKM4YDR257C TY1A-BRQ12217 440 aa8.82□□□□□ -1
RKM4YDR257C TY1A-NL2Q12470 440 aa8.82□□□□□ -1
RKM4YDR257C TY1A-GR2Q12485 440 aa8.82□□□□□ -1
RKM4YDR257C SEC2P17065 759 aa8.81□□□□□ -1
RKM4YDR257C YDJ1P25491 409 aaKnown RBP8.81□□□□□ -1
RKM4YDR257C NAF1P53919 492 aaKnown RBP8.81□□□□□ -1
RKM4YDR257C AGE1Q04412 482 aa8.81□□□□□ -1
RKM4YDR257C YML082WQ04533 649 aaKnown RBP8.81□□□□□ -1
RKM4YDR257C SUB2Q07478 446 aaKnown RBP8.8□□□□□ -1
RKM4YDR257C YDL206WQ12424 762 aa8.8□□□□□ -1
RKM4YDR257C PRT1P06103 763 aaKnown RBP8.79□□□□□ -1
RKM4YDR257C ENO2P00925 437 aaKnown RBP8.78□□□□□ -1
RKM4YDR257C RPA14P50106 137 aa8.78□□□□□ -1
RKM4YDR257C YPR015CQ12531 247 aa8.78□□□□□ -1
RKM4YDR257C CHL1P22516 861 aaPredicted RBP8.77□□□□□ -1
RKM4YDR257C PAT1P25644 796 aaKnown RBP8.77□□□□□ -1
RKM4YDR257C YPP1P46951 817 aa8.77□□□□□ -1
RKM4YDR257C SSA1P10591 642 aaKnown RBP8.77□□□□□ -1.01
RKM4YDR257C TTI1P36097 1038 aa8.77□□□□□ -1.01
RKM4YDR257C SIS2P36024 562 aa8.76□□□□□ -1.01
RKM4YDR257C ALR1Q08269 859 aa8.76□□□□□ -1.01
RKM4YDR257C CPS1P27614 576 aa8.75□□□□□ -1.01
RKM4YDR257C RIM21P48565 533 aa8.75□□□□□ -1.01
RKM4YDR257C ENO1P00924 437 aaKnown RBP8.74□□□□□ -1.01
RKM4YDR257C RRN7P40992 514 aa8.74□□□□□ -1.01
RKM4YDR257C YPR097WQ06839 1073 aa8.74□□□□□ -1.01
RKM4YDR257C PAC1P39946 494 aaKnown RBP8.73□□□□□ -1.01
RKM4YDR257C MRX10Q05648 414 aa8.73□□□□□ -1.01
RKM4YDR257C KXD1P53158 218 aa8.72□□□□□ -1.01
RKM4YDR257C MCM16Q12262 181 aa8.72□□□□□ -1.01
RKM4YDR257C SPT16P32558 1035 aaKnown RBP8.7□□□□□ -1.02
RKM4YDR257C GEF1P37020 779 aa8.7□□□□□ -1.02
RKM4YDR257C PDC1P06169 563 aaKnown RBP8.69□□□□□ -1.02
RKM4YDR257C SAS4Q04003 481 aa8.69□□□□□ -1.02
RKM4YDR257C TEC1P18412 486 aa8.68□□□□□ -1.02
RKM4YDR257C GYP1Q08484 637 aa8.68□□□□□ -1.02
RKM4YDR257C HXT10P43581 546 aa8.65□□□□□ -1.02
RKM4YDR257C GUT2P32191 649 aa8.64□□□□□ -1.03
RKM4YDR257C FIG4P42837 879 aa8.64□□□□□ -1.03
RKM4YDR257C EMP47P43555 445 aa8.64□□□□□ -1.03
RKM4YDR257C MRX12P47084 519 aa8.64□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms