RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeastyeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC1YDR182W RAD9P14737 1309 aa9.29□□□□□ -0.92
CDC1YDR182W YIL055CP40523 627 aaKnown RBP9.27□□□□□ -0.93
CDC1YDR182W TY3B-IQ7LHG5 1498 aaKnown RBP9.27□□□□□ -0.93
CDC1YDR182W PAF1P38351 445 aa9.26□□□□□ -0.93
CDC1YDR182W SPT21P35209 758 aa9.23□□□□□ -0.93
CDC1YDR182W ALD4P46367 519 aaKnown RBP9.22□□□□□ -0.93
CDC1YDR182W RTC1Q08281 1341 aa9.22□□□□□ -0.93
CDC1YDR182W MRPL32P25348 183 aa9.21□□□□□ -0.94
CDC1YDR182W ENT1Q12518 454 aa9.2□□□□□ -0.94
CDC1YDR182W YGL015CP33199 130 aa9.18□□□□□ -0.94
CDC1YDR182W NOP7P53261 605 aaKnown RBP9.16□□□□□ -0.94
CDC1YDR182W ENV9Q08651 330 aa9.16□□□□□ -0.94
CDC1YDR182W RRP5Q05022 1729 aaKnown RBP9.16□□□□□ -0.94
CDC1YDR182W YRF1-2P40105 1681 aa9.15□□□□□ -0.94
CDC1YDR182W YMR074CQ04773 145 aa9.13□□□□□ -0.95
CDC1YDR182W IMH1Q06704 911 aaKnown RBP9.11□□□□□ -0.95
CDC1YDR182W RCM1P53972 490 aa9.1□□□□□ -0.95
CDC1YDR182W TAF8Q03750 510 aa9.1□□□□□ -0.95
CDC1YDR182W TY4B-HP0C2J7 1802 aa9.1□□□□□ -0.95
CDC1YDR182W TY4B-JP47024 1803 aa9.1□□□□□ -0.95
CDC1YDR182W TAF5P38129 798 aa9.09□□□□□ -0.95
CDC1YDR182W PRP45P28004 379 aaPredicted RBP9.08□□□□□ -0.96
CDC1YDR182W CPS1P27614 576 aa9.08□□□□□ -0.96
CDC1YDR182W NAP1P25293 417 aaKnown RBP9.07□□□□□ -0.96
CDC1YDR182W RIM101P33400 625 aa9.06□□□□□ -0.96
CDC1YDR182W PPH3P32345 308 aa9.05□□□□□ -0.96
CDC1YDR182W ESL2P36168 1195 aa9.04□□□□□ -0.96
CDC1YDR182W PRP5P21372 849 aaPredicted RBP9□□□□□ -0.97
CDC1YDR182W URB1P34241 1764 aaKnown RBP8.99□□□□□ -0.97
CDC1YDR182W YKR023WP36119 530 aaKnown RBP8.99□□□□□ -0.97
CDC1YDR182W LEU3P08638 886 aa8.97□□□□□ -0.97
CDC1YDR182W SIS1P25294 352 aaKnown RBP8.97□□□□□ -0.97
CDC1YDR182W MSB3P48566 633 aaPredicted RBP8.97□□□□□ -0.97
CDC1YDR182W ADE6P38972 1358 aaKnown RBP8.96□□□□□ -0.97
CDC1YDR182W FKS3Q04952 1785 aa8.95□□□□□ -0.98
CDC1YDR182W SPE2P21182 396 aa8.94□□□□□ -0.98
CDC1YDR182W KIP3P53086 805 aaKnown RBP8.94□□□□□ -0.98
CDC1YDR182W PSK1P31374 1356 aa8.94□□□□□ -0.98
CDC1YDR182W RPN11P43588 306 aaKnown RBP8.93□□□□□ -0.98
CDC1YDR182W IES2P40154 320 aa8.91□□□□□ -0.98
CDC1YDR182W DOT5P40553 215 aa8.91□□□□□ -0.98
CDC1YDR182W UBP1P25037 809 aa8.9□□□□□ -0.98
CDC1YDR182W ORC1P54784 914 aaPredicted RBP8.89□□□□□ -0.99
CDC1YDR182W YIL177CP40434 1758 aa8.89□□□□□ -0.99
CDC1YDR182W YJL225CP40889 1758 aa8.89□□□□□ -0.99
CDC1YDR182W TCB1Q12466 1186 aa8.89□□□□□ -0.99
CDC1YDR182W CSE4P36012 229 aa8.88□□□□□ -0.99
CDC1YDR182W FOX2Q02207 900 aaKnown RBP8.88□□□□□ -0.99
CDC1YDR182W YRF1-3P0CX14 1859 aa8.88□□□□□ -0.99
CDC1YDR182W YRF1-7P0CX15 1859 aa8.88□□□□□ -0.99
CDC1YDR182W YRF1-6P53819 1859 aa8.88□□□□□ -0.99
CDC1YDR182W RSF2P46974 1380 aa8.87□□□□□ -0.99
CDC1YDR182W RPS24AP0CX31 135 aaKnown RBP8.87□□□□□ -0.99
CDC1YDR182W RPS24BP0CX32 135 aaKnown RBP8.87□□□□□ -0.99
CDC1YDR182W SLM3Q12093 417 aa8.87□□□□□ -0.99
CDC1YDR182W CDC27P38042 758 aa8.86□□□□□ -0.99
CDC1YDR182W YBL086CP38177 466 aa8.86□□□□□ -0.99
CDC1YDR182W CHZ1P40019 153 aaPredicted RBP8.86□□□□□ -0.99
CDC1YDR182W ROM2P51862 1356 aaKnown RBP8.85□□□□□ -0.99
CDC1YDR182W YLR419WQ06698 1435 aaKnown RBP8.85□□□□□ -0.99
CDC1YDR182W LEU2P04173 364 aaPredicted RBP8.84□□□□□ -0.99
CDC1YDR182W NPR2P39923 615 aa8.84□□□□□ -0.99
CDC1YDR182W LYS4P49367 693 aaPredicted RBP8.84□□□□□ -0.99
CDC1YDR182W MTR4P47047 1073 aaKnown RBP8.83□□□□□ -1
CDC1YDR182W HOP09932 586 aa8.82□□□□□ -1
CDC1YDR182W PRP43P53131 767 aaKnown RBP8.82□□□□□ -1
CDC1YDR182W APC1P53886 1748 aa8.82□□□□□ -1
CDC1YDR182W YML133CQ03099 1374 aa8.81□□□□□ -1
CDC1YDR182W YLL067CQ07888 1374 aa8.81□□□□□ -1
CDC1YDR182W YLL066CQ99208 1374 aa8.81□□□□□ -1
CDC1YDR182W XKS1P42826 600 aa8.81□□□□□ -1
CDC1YDR182W YJL181WP46987 611 aa8.81□□□□□ -1
CDC1YDR182W TFC8Q12308 588 aa8.81□□□□□ -1
CDC1YDR182W YKL133CP36066 463 aa8.8□□□□□ -1
CDC1YDR182W COBP00163 385 aa8.79□□□□□ -1
CDC1YDR182W OXP1P28273 1286 aa8.79□□□□□ -1
CDC1YDR182W ENP1P38333 483 aaKnown RBP8.79□□□□□ -1
CDC1YDR182W YRF1-4O13559 1382 aa8.78□□□□□ -1
CDC1YDR182W LAM6Q08001 693 aa8.78□□□□□ -1
CDC1YDR182W EDE1P34216 1381 aa8.78□□□□□ -1
CDC1YDR182W UGA2P38067 497 aa8.77□□□□□ -1
CDC1YDR182W PRP40P33203 583 aaKnown RBP8.77□□□□□ -1.01
CDC1YDR182W YKR075CP36155 307 aa8.77□□□□□ -1.01
CDC1YDR182W SSA2P10592 639 aaKnown RBP8.76□□□□□ -1.01
CDC1YDR182W YEF3P16521 1044 aaKnown RBP8.76□□□□□ -1.01
CDC1YDR182W CTH1P47976 325 aa8.76□□□□□ -1.01
CDC1YDR182W DCD1P06773 312 aa8.75□□□□□ -1.01
CDC1YDR182W ALD2P47771 506 aa8.75□□□□□ -1.01
CDC1YDR182W GTT3P39996 337 aa8.74□□□□□ -1.01
CDC1YDR182W GAS4Q08271 471 aa8.74□□□□□ -1.01
CDC1YDR182W DPS1P04802 557 aaKnown RBP8.73□□□□□ -1.01
CDC1YDR182W FRK1Q03002 865 aaPredicted RBP8.72□□□□□ -1.01
CDC1YDR182W SNF2P22082 1703 aa8.71□□□□□ -1.01
CDC1YDR182W MLP1Q02455 1875 aaKnown RBP8.71□□□□□ -1.02
CDC1YDR182W RCR1P38212 213 aa8.69□□□□□ -1.02
CDC1YDR182W RIM15P43565 1770 aa8.68□□□□□ -1.02
CDC1YDR182W SSA1P10591 642 aaKnown RBP8.68□□□□□ -1.02
CDC1YDR182W ADE16P54113 591 aaKnown RBP8.68□□□□□ -1.02
CDC1YDR182W RTG3P38165 486 aa8.67□□□□□ -1.02
CDC1YDR182W FKH1P40466 484 aa8.67□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms