RNA–Protein interactions for RNA: YDL204W

RTN2, Transcript of Reticulon protein, yeastyeast

Gene RTN2, Length 1,182 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN2YDL204W RPP0P05317 312 aaKnown RBP12.9□□□□□ -0.34
RTN2YDL204W PSK1P31374 1356 aa12.89□□□□□ -0.35
RTN2YDL204W YML133CQ03099 1374 aa12.89□□□□□ -0.35
RTN2YDL204W YLL067CQ07888 1374 aa12.89□□□□□ -0.35
RTN2YDL204W YLL066CQ99208 1374 aa12.89□□□□□ -0.35
RTN2YDL204W MAK10Q02197 733 aa12.87□□□□□ -0.35
RTN2YDL204W CDC45Q08032 650 aa12.87□□□□□ -0.35
RTN2YDL204W TY1B-NL2Q99337 1749 aaKnown RBP12.87□□□□□ -0.35
RTN2YDL204W VPS27P40343 622 aaKnown RBP12.86□□□□□ -0.35
RTN2YDL204W RCM1P53972 490 aa12.86□□□□□ -0.35
RTN2YDL204W USO1P25386 1790 aa12.85□□□□□ -0.35
RTN2YDL204W IOC4Q04213 475 aa12.85□□□□□ -0.35
RTN2YDL204W TRK1P12685 1235 aa12.82□□□□□ -0.36
RTN2YDL204W YEF3P16521 1044 aaKnown RBP12.82□□□□□ -0.36
RTN2YDL204W YDL144CQ07589 356 aa12.82□□□□□ -0.36
RTN2YDL204W ABP1P15891 592 aaKnown RBP12.81□□□□□ -0.36
RTN2YDL204W KAR2P16474 682 aaKnown RBP12.81□□□□□ -0.36
RTN2YDL204W PDI1P17967 522 aaKnown RBP12.78□□□□□ -0.36
RTN2YDL204W PPH3P32345 308 aa12.78□□□□□ -0.36
RTN2YDL204W YNR029CP53729 429 aaKnown RBP12.77□□□□□ -0.37
RTN2YDL204W FAP1P53971 965 aa12.77□□□□□ -0.37
RTN2YDL204W LEU2P04173 364 aaPredicted RBP12.75□□□□□ -0.37
RTN2YDL204W RTF1P53064 558 aa12.75□□□□□ -0.37
RTN2YDL204W YRB30P53107 440 aaPredicted RBP12.75□□□□□ -0.37
RTN2YDL204W CPS1P27614 576 aa12.74□□□□□ -0.37
RTN2YDL204W TFA1P36100 482 aa12.74□□□□□ -0.37
RTN2YDL204W MTR4P47047 1073 aaKnown RBP12.74□□□□□ -0.37
RTN2YDL204W TAP42Q04372 366 aa12.74□□□□□ -0.37
RTN2YDL204W RVB2Q12464 471 aaKnown RBP12.74□□□□□ -0.37
RTN2YDL204W RTR1P40084 226 aaPredicted RBP12.73□□□□□ -0.37
RTN2YDL204W GRX4P32642 244 aa12.72□□□□□ -0.37
RTN2YDL204W MPP10P47083 593 aaKnown RBP12.72□□□□□ -0.37
RTN2YDL204W FUN12P39730 1002 aaKnown RBP12.71□□□□□ -0.37
RTN2YDL204W FPR3P38911 411 aaKnown RBP12.7□□□□□ -0.38
RTN2YDL204W PAP2P53632 584 aaKnown RBP12.7□□□□□ -0.38
RTN2YDL204W SUI2P20459 304 aaKnown RBP12.68□□□□□ -0.38
RTN2YDL204W AUS1Q08409 1394 aa12.67□□□□□ -0.38
RTN2YDL204W RRP46P53256 223 aaPredicted RBP12.65□□□□□ -0.38
RTN2YDL204W ADE6P38972 1358 aaKnown RBP12.64□□□□□ -0.39
RTN2YDL204W TY4B-HP0C2J7 1802 aa12.64□□□□□ -0.39
RTN2YDL204W TY4B-JP47024 1803 aa12.64□□□□□ -0.39
RTN2YDL204W CSE4P36012 229 aa12.63□□□□□ -0.39
RTN2YDL204W RPO41P13433 1351 aaKnown RBP12.62□□□□□ -0.39
RTN2YDL204W HIM1Q06674 414 aa12.62□□□□□ -0.39
RTN2YDL204W YMR196WQ04336 1088 aa12.61□□□□□ -0.39
RTN2YDL204W PRD1P25375 712 aa12.6□□□□□ -0.39
RTN2YDL204W RPS24AP0CX31 135 aaKnown RBP12.59□□□□□ -0.39
RTN2YDL204W RPS24BP0CX32 135 aaKnown RBP12.59□□□□□ -0.39
RTN2YDL204W SAP155P43612 1002 aa12.59□□□□□ -0.39
RTN2YDL204W NAB6Q03735 1134 aaKnown RBP RIP-Chip data12.59□□□□□ -0.39not detected
RTN2YDL204W DPS1P04802 557 aaKnown RBP12.58□□□□□ -0.4
RTN2YDL204W PRP43P53131 767 aaKnown RBP12.58□□□□□ -0.4
RTN2YDL204W YRF1-2P40105 1681 aa12.57□□□□□ -0.4
RTN2YDL204W RAD2P07276 1031 aa12.57□□□□□ -0.4
RTN2YDL204W TPD3P31383 635 aa12.57□□□□□ -0.4
RTN2YDL204W APC1P53886 1748 aa12.57□□□□□ -0.4
RTN2YDL204W SIR4P11978 1358 aa12.56□□□□□ -0.4
RTN2YDL204W THI22Q06490 572 aa12.56□□□□□ -0.4
RTN2YDL204W GAS4Q08271 471 aa12.56□□□□□ -0.4
RTN2YDL204W BUD27P43573 796 aaKnown RBP RIP-Chip data12.54□□□□□ -0.4not detected
RTN2YDL204W RRP5Q05022 1729 aaKnown RBP12.52□□□□□ -0.41
RTN2YDL204W RPC31P17890 251 aa12.52□□□□□ -0.41
RTN2YDL204W HEF3P53978 1044 aaKnown RBP12.52□□□□□ -0.41
RTN2YDL204W MAK21Q12176 1025 aaKnown RBP12.52□□□□□ -0.41
RTN2YDL204W FKS3Q04952 1785 aa12.51□□□□□ -0.41
RTN2YDL204W YIL177CP40434 1758 aa12.5□□□□□ -0.41
RTN2YDL204W YJL225CP40889 1758 aa12.5□□□□□ -0.41
RTN2YDL204W THI12P42883 340 aa12.49□□□□□ -0.41
RTN2YDL204W THI5P43534 340 aa12.49□□□□□ -0.41
RTN2YDL204W THI11P47183 340 aa12.49□□□□□ -0.41
RTN2YDL204W THI13Q07748 340 aa12.49□□□□□ -0.41
RTN2YDL204W RTT109Q07794 436 aa12.49□□□□□ -0.41
RTN2YDL204W YRF1-4O13559 1382 aa12.48□□□□□ -0.41
RTN2YDL204W DAL5P15365 543 aa12.48□□□□□ -0.41
RTN2YDL204W AKL1P38080 1108 aaKnown RBP12.48□□□□□ -0.41
RTN2YDL204W BUB1P41695 1021 aaKnown RBP RIP-Chip data12.48□□□□□ -0.41not detected
RTN2YDL204W YIL092WP40497 633 aa12.47□□□□□ -0.41
RTN2YDL204W URB1P34241 1764 aaKnown RBP12.46□□□□□ -0.42
RTN2YDL204W DSD1P53095 428 aa12.4□□□□□ -0.42
RTN2YDL204W POL32P47110 350 aa12.39□□□□□ -0.43
RTN2YDL204W GYP7P48365 746 aa12.39□□□□□ -0.43
RTN2YDL204W YNL050CP53952 270 aa12.39□□□□□ -0.43
RTN2YDL204W MAM1P40065 302 aa12.38□□□□□ -0.43
RTN2YDL204W ZDS1P50111 915 aaKnown RBP12.37□□□□□ -0.43
RTN2YDL204W EDE1P34216 1381 aa12.36□□□□□ -0.43
RTN2YDL204W PRP5P21372 849 aaPredicted RBP12.36□□□□□ -0.43
RTN2YDL204W RRT14P40470 206 aa12.36□□□□□ -0.43
RTN2YDL204W YFR016CP43597 1233 aaKnown RBP12.35□□□□□ -0.43
RTN2YDL204W PUF6Q04373 656 aaKnown RBP12.35□□□□□ -0.43
RTN2YDL204W AOS1Q06624 347 aa12.35□□□□□ -0.43
RTN2YDL204W PRP45P28004 379 aaPredicted RBP12.34□□□□□ -0.43
RTN2YDL204W HSP104P31539 908 aaKnown RBP12.34□□□□□ -0.43
RTN2YDL204W NTH2P35172 780 aa12.34□□□□□ -0.43
RTN2YDL204W CTF4Q01454 927 aa12.32□□□□□ -0.44
RTN2YDL204W SLM3Q12093 417 aa12.32□□□□□ -0.44
RTN2YDL204W TRP5P00931 707 aaKnown RBP12.3□□□□□ -0.44
RTN2YDL204W SRT1Q03175 343 aa12.3□□□□□ -0.44
RTN2YDL204W YBR287WP38355 427 aa12.29□□□□□ -0.44
RTN2YDL204W MSB3P48566 633 aaPredicted RBP12.29□□□□□ -0.44
RTN2YDL204W NSE3Q05541 303 aa12.28□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 125.2 ms