RNA–Protein interactions for RNA: YDL182W

LYS20, Transcript of Homocitrate synthase isozyme, yeastyeast

Gene LYS20, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LYS20YDL182W RCM1P53972 490 aa11.71□□□□□ -0.53
LYS20YDL182W TY4B-HP0C2J7 1802 aa11.71□□□□□ -0.54
LYS20YDL182W TY4B-JP47024 1803 aa11.71□□□□□ -0.54
LYS20YDL182W TAF5P38129 798 aa11.7□□□□□ -0.54
LYS20YDL182W PRP45P28004 379 aaPredicted RBP11.68□□□□□ -0.54
LYS20YDL182W PPH3P32345 308 aa11.68□□□□□ -0.54
LYS20YDL182W ESL2P36168 1195 aa11.68□□□□□ -0.54
LYS20YDL182W PRI1P10363 409 aa11.66□□□□□ -0.54
LYS20YDL182W NAP1P25293 417 aaKnown RBP11.66□□□□□ -0.54
LYS20YDL182W BUD31P25337 157 aaPredicted RBP11.62□□□□□ -0.55
LYS20YDL182W PRP5P21372 849 aaPredicted RBP11.6□□□□□ -0.55
LYS20YDL182W ADE6P38972 1358 aaKnown RBP11.59□□□□□ -0.55
LYS20YDL182W DIP2Q12220 943 aaPredicted RBP11.59□□□□□ -0.55
LYS20YDL182W URB1P34241 1764 aaKnown RBP11.58□□□□□ -0.56
LYS20YDL182W PSK1P31374 1356 aa11.57□□□□□ -0.56
LYS20YDL182W MSB3P48566 633 aaPredicted RBP11.56□□□□□ -0.56
LYS20YDL182W SPE2P21182 396 aa11.54□□□□□ -0.56
LYS20YDL182W FKS3Q04952 1785 aa11.52□□□□□ -0.57
LYS20YDL182W FAP1P53971 965 aa11.52□□□□□ -0.57
LYS20YDL182W KIP3P53086 805 aaKnown RBP11.51□□□□□ -0.57
LYS20YDL182W DOT5P40553 215 aa11.5□□□□□ -0.57
LYS20YDL182W YRF1-3P0CX14 1859 aa11.49□□□□□ -0.57
LYS20YDL182W YRF1-7P0CX15 1859 aa11.49□□□□□ -0.57
LYS20YDL182W YRF1-6P53819 1859 aa11.49□□□□□ -0.57
LYS20YDL182W LEU3P08638 886 aa11.48□□□□□ -0.57
LYS20YDL182W IES2P40154 320 aa11.48□□□□□ -0.57
LYS20YDL182W RPN11P43588 306 aaKnown RBP11.48□□□□□ -0.57
LYS20YDL182W YIL177CP40434 1758 aa11.46□□□□□ -0.57
LYS20YDL182W YJL225CP40889 1758 aa11.46□□□□□ -0.57
LYS20YDL182W PRP43P53131 767 aaKnown RBP11.46□□□□□ -0.57
LYS20YDL182W SLM3Q12093 417 aa11.45□□□□□ -0.58
LYS20YDL182W TCB1Q12466 1186 aa11.45□□□□□ -0.58
LYS20YDL182W RSF2P46974 1380 aa11.44□□□□□ -0.58
LYS20YDL182W FOX2Q02207 900 aaKnown RBP11.44□□□□□ -0.58
LYS20YDL182W UBP1P25037 809 aa11.43□□□□□ -0.58
LYS20YDL182W YLR419WQ06698 1435 aaKnown RBP11.43□□□□□ -0.58
LYS20YDL182W LEU2P04173 364 aaPredicted RBP11.42□□□□□ -0.58
LYS20YDL182W RPS24AP0CX31 135 aaKnown RBP11.42□□□□□ -0.58
LYS20YDL182W RPS24BP0CX32 135 aaKnown RBP11.42□□□□□ -0.58
LYS20YDL182W CSE4P36012 229 aa11.42□□□□□ -0.58
LYS20YDL182W NPR2P39923 615 aa11.42□□□□□ -0.58
LYS20YDL182W CHZ1P40019 153 aaPredicted RBP11.42□□□□□ -0.58
LYS20YDL182W ROM2P51862 1356 aaKnown RBP11.41□□□□□ -0.58
LYS20YDL182W MTR4P47047 1073 aaKnown RBP11.4□□□□□ -0.58
LYS20YDL182W ORC1P54784 914 aaPredicted RBP11.4□□□□□ -0.58
LYS20YDL182W YML133CQ03099 1374 aa11.4□□□□□ -0.59
LYS20YDL182W YLL067CQ07888 1374 aa11.4□□□□□ -0.59
LYS20YDL182W YLL066CQ99208 1374 aa11.4□□□□□ -0.59
LYS20YDL182W YBL086CP38177 466 aa11.39□□□□□ -0.59
LYS20YDL182W LYS4P49367 693 aaPredicted RBP11.38□□□□□ -0.59
LYS20YDL182W APC1P53886 1748 aa11.37□□□□□ -0.59
LYS20YDL182W AVT3P36062 692 aa11.36□□□□□ -0.59
LYS20YDL182W EDE1P34216 1381 aa11.34□□□□□ -0.59
LYS20YDL182W XKS1P42826 600 aa11.34□□□□□ -0.59
LYS20YDL182W YEF3P16521 1044 aaKnown RBP11.33□□□□□ -0.6
LYS20YDL182W YKL133CP36066 463 aa11.33□□□□□ -0.6
LYS20YDL182W COBP00163 385 aa11.31□□□□□ -0.6
LYS20YDL182W YKR075CP36155 307 aa11.31□□□□□ -0.6
LYS20YDL182W GTT3P39996 337 aa11.31□□□□□ -0.6
LYS20YDL182W CTH1P47976 325 aa11.31□□□□□ -0.6
LYS20YDL182W YJL181WP46987 611 aa11.3□□□□□ -0.6
LYS20YDL182W UGA2P38067 497 aa11.29□□□□□ -0.6
LYS20YDL182W YRF1-4O13559 1382 aa11.28□□□□□ -0.6
LYS20YDL182W SSA2P10592 639 aaKnown RBP11.27□□□□□ -0.61
LYS20YDL182W PRP40P33203 583 aaKnown RBP11.27□□□□□ -0.61
LYS20YDL182W ENP1P38333 483 aaKnown RBP11.27□□□□□ -0.61
LYS20YDL182W ALD2P47771 506 aa11.27□□□□□ -0.61
LYS20YDL182W LAM6Q08001 693 aa11.27□□□□□ -0.61
LYS20YDL182W SNF2P22082 1703 aa11.25□□□□□ -0.61
LYS20YDL182W FKH1P40466 484 aa11.24□□□□□ -0.61
LYS20YDL182W GAS4Q08271 471 aa11.23□□□□□ -0.61
LYS20YDL182W ISW2Q08773 1120 aa11.23□□□□□ -0.61
LYS20YDL182W MLP1Q02455 1875 aaKnown RBP11.23□□□□□ -0.61
LYS20YDL182W DPS1P04802 557 aaKnown RBP11.22□□□□□ -0.61
LYS20YDL182W RCR1P38212 213 aa11.21□□□□□ -0.61
LYS20YDL182W FRK1Q03002 865 aaPredicted RBP11.2□□□□□ -0.62
LYS20YDL182W ADE16P54113 591 aaKnown RBP11.19□□□□□ -0.62
LYS20YDL182W SIR4P11978 1358 aa11.18□□□□□ -0.62
LYS20YDL182W AUS1Q08409 1394 aa11.18□□□□□ -0.62
LYS20YDL182W RTG3P38165 486 aa11.18□□□□□ -0.62
LYS20YDL182W SSA1P10591 642 aaKnown RBP11.17□□□□□ -0.62
LYS20YDL182W RIM15P43565 1770 aa11.16□□□□□ -0.62
LYS20YDL182W PDI1P17967 522 aaKnown RBP11.16□□□□□ -0.62
LYS20YDL182W SCT1P32784 759 aa11.16□□□□□ -0.62
LYS20YDL182W MEC3Q02574 474 aa11.15□□□□□ -0.62
LYS20YDL182W RTF1P53064 558 aa11.14□□□□□ -0.63
LYS20YDL182W RPO41P13433 1351 aaKnown RBP11.14□□□□□ -0.63
LYS20YDL182W POL5P39985 1022 aaKnown RBP11.13□□□□□ -0.63
LYS20YDL182W HIM1Q06674 414 aa11.12□□□□□ -0.63
LYS20YDL182W TAP42Q04372 366 aa11.11□□□□□ -0.63
LYS20YDL182W BDF1P35817 686 aa11.1□□□□□ -0.63
LYS20YDL182W SEC3P33332 1336 aaKnown RBP11.09□□□□□ -0.63
LYS20YDL182W RPG1P38249 964 aaKnown RBP11.09□□□□□ -0.63
LYS20YDL182W GRX4P32642 244 aa11.08□□□□□ -0.64
LYS20YDL182W MSB4Q12317 492 aa11.08□□□□□ -0.64
LYS20YDL182W SPT7P35177 1332 aa11.08□□□□□ -0.64
LYS20YDL182W ALD3P54114 506 aa11.06□□□□□ -0.64
LYS20YDL182W ATG13Q06628 738 aa11.06□□□□□ -0.64
LYS20YDL182W INP54Q08227 384 aaKnown RBP11.06□□□□□ -0.64
LYS20YDL182W OSM1P21375 501 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms