RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W YEL023CP39992 682 aa3□□□□□ -1.93
TRM3YDL112W TRP5P00931 707 aaKnown RBP3□□□□□ -1.93
TRM3YDL112W PML39Q03760 334 aa3□□□□□ -1.93
TRM3YDL112W TYW1Q08960 810 aaKnown RBP2.99□□□□□ -1.93
TRM3YDL112W SAS10Q12136 610 aaPredicted RBP2.99□□□□□ -1.93
TRM3YDL112W TRM732Q03496 1420 aa2.99□□□□□ -1.93
TRM3YDL112W SAP30P38429 201 aa2.98□□□□□ -1.93
TRM3YDL112W LDB19Q12502 818 aa2.98□□□□□ -1.93
TRM3YDL112W SNT2P53127 1403 aa2.98□□□□□ -1.93
TRM3YDL112W KIN1P13185 1064 aa2.98□□□□□ -1.93
TRM3YDL112W CDC73Q06697 393 aa2.98□□□□□ -1.93
TRM3YDL112W STU1P38198 1513 aa2.98□□□□□ -1.93
TRM3YDL112W VPS15P22219 1454 aa2.98□□□□□ -1.93
TRM3YDL112W DNF2Q12675 1612 aa2.98□□□□□ -1.93
TRM3YDL112W NUP159P40477 1460 aa2.98□□□□□ -1.93
TRM3YDL112W SPO14P36126 1683 aa2.98□□□□□ -1.93
TRM3YDL112W VTH1P40438 1549 aa2.97□□□□□ -1.93
TRM3YDL112W VTH2P40890 1549 aa2.97□□□□□ -1.93
TRM3YDL112W KEX1P09620 729 aa2.97□□□□□ -1.93
TRM3YDL112W TUM1Q08686 304 aaKnown RBP2.97□□□□□ -1.93
TRM3YDL112W MYO4P32492 1471 aa2.97□□□□□ -1.93
TRM3YDL112W SPP41P38904 1435 aa2.97□□□□□ -1.93
TRM3YDL112W RPN1P38764 993 aaKnown RBP2.97□□□□□ -1.93
TRM3YDL112W YGR273CP53329 174 aa2.97□□□□□ -1.93
TRM3YDL112W YLR326WQ06170 240 aaKnown RBP2.97□□□□□ -1.93
TRM3YDL112W PDR12Q02785 1511 aa2.96□□□□□ -1.94
TRM3YDL112W ILV3P39522 585 aaKnown RBP2.96□□□□□ -1.94
TRM3YDL112W VNX1P42839 908 aa2.96□□□□□ -1.94
TRM3YDL112W MLP2P40457 1679 aa2.96□□□□□ -1.94
TRM3YDL112W TSC11P40061 1430 aa2.96□□□□□ -1.94
TRM3YDL112W YJL171CP46992 396 aa2.96□□□□□ -1.94
TRM3YDL112W RTG1P32607 177 aa2.95□□□□□ -1.94
TRM3YDL112W PCS60P38137 543 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
TRM3YDL112W ELP4Q02884 456 aaKnown RBP2.95□□□□□ -1.94
TRM3YDL112W DOP1Q03921 1698 aa2.95□□□□□ -1.94
TRM3YDL112W SCJ1P25303 377 aa2.95□□□□□ -1.94
TRM3YDL112W TIF11P38912 153 aaKnown RBP2.95□□□□□ -1.94
TRM3YDL112W SNQ2P32568 1501 aaKnown RBP2.95□□□□□ -1.94
TRM3YDL112W LEU3P08638 886 aa2.95□□□□□ -1.94
TRM3YDL112W LEO1P38439 464 aa2.95□□□□□ -1.94
TRM3YDL112W YRR1Q12172 810 aa2.95□□□□□ -1.94
TRM3YDL112W TRM3Q07527 1436 aa2.94□□□□□ -1.94
TRM3YDL112W UBP14P38237 781 aaKnown RBP2.94□□□□□ -1.94
TRM3YDL112W DRS2P39524 1355 aa2.94□□□□□ -1.94
TRM3YDL112W MMS1Q06211 1407 aa2.94□□□□□ -1.94
TRM3YDL112W NUP170P38181 1502 aa2.94□□□□□ -1.94
TRM3YDL112W YJL007CP47080 104 aa2.94□□□□□ -1.94
TRM3YDL112W RPL34BP40525 121 aaKnown RBP2.93□□□□□ -1.94
TRM3YDL112W YPR109WQ06104 294 aa2.93□□□□□ -1.94
TRM3YDL112W YOR093CQ12275 1648 aa2.93□□□□□ -1.94
TRM3YDL112W TAF7Q05021 590 aa2.93□□□□□ -1.94
TRM3YDL112W BUD3P25558 1636 aa2.93□□□□□ -1.94
TRM3YDL112W PKH3Q03306 898 aaPredicted RBP2.92□□□□□ -1.94
TRM3YDL112W RPP1BP10622 106 aaKnown RBP2.92□□□□□ -1.94
TRM3YDL112W ESS1P22696 170 aa2.92□□□□□ -1.94
TRM3YDL112W SOL3P38858 249 aa2.92□□□□□ -1.94
TRM3YDL112W DAN4P47179 1161 aa2.92□□□□□ -1.94
TRM3YDL112W DSF2P38213 736 aa2.92□□□□□ -1.94
TRM3YDL112W GUA1P38625 525 aaKnown RBP2.92□□□□□ -1.94
TRM3YDL112W TEA1P47988 759 aa2.92□□□□□ -1.94
TRM3YDL112W ULS1Q08562 1619 aa2.92□□□□□ -1.94
TRM3YDL112W ARG8P18544 423 aa2.92□□□□□ -1.94
TRM3YDL112W GCD11P32481 527 aaKnown RBP2.92□□□□□ -1.94
TRM3YDL112W NPL4P33755 580 aa2.91□□□□□ -1.94
TRM3YDL112W ITT1Q04638 464 aa2.91□□□□□ -1.94
TRM3YDL112W YPR148CQ06523 435 aa2.91□□□□□ -1.94
TRM3YDL112W GDB1Q06625 1536 aa2.91□□□□□ -1.94
TRM3YDL112W EAP1P36041 632 aaKnown RBP2.91□□□□□ -1.94
TRM3YDL112W SLI15P38283 698 aa2.91□□□□□ -1.94
TRM3YDL112W CSN12P47130 423 aa2.91□□□□□ -1.94
TRM3YDL112W SAM3Q08986 587 aa2.91□□□□□ -1.94
TRM3YDL112W NCR1Q12200 1170 aa2.91□□□□□ -1.94
TRM3YDL112W COX6P00427 148 aa2.9□□□□□ -1.94
TRM3YDL112W CHC1P22137 1653 aaKnown RBP2.9□□□□□ -1.94
TRM3YDL112W YTA7P40340 1379 aa2.9□□□□□ -1.94
TRM3YDL112W PKC1P24583 1151 aa2.89□□□□□ -1.95
TRM3YDL112W TFB3Q03290 321 aa2.89□□□□□ -1.95
TRM3YDL112W SLY41P22215 453 aa2.89□□□□□ -1.95
TRM3YDL112W BRL1P38770 471 aa2.89□□□□□ -1.95
TRM3YDL112W KTR7P40504 517 aa2.89□□□□□ -1.95
TRM3YDL112W NUP42P49686 430 aaKnown RBP2.89□□□□□ -1.95
TRM3YDL112W YDR090CQ03193 310 aa2.89□□□□□ -1.95
TRM3YDL112W PDR1P12383 1068 aa2.89□□□□□ -1.95
TRM3YDL112W YDR344CQ05510 147 aa2.89□□□□□ -1.95
TRM3YDL112W MSB4Q12317 492 aa2.89□□□□□ -1.95
TRM3YDL112W PTC4P38089 393 aa2.89□□□□□ -1.95
TRM3YDL112W YNL035CP53962 389 aaKnown RBP2.89□□□□□ -1.95
TRM3YDL112W TBF1Q02457 562 aa2.89□□□□□ -1.95
TRM3YDL112W MPC54Q08550 464 aa2.89□□□□□ -1.95
TRM3YDL112W STH1P32597 1359 aa2.88□□□□□ -1.95
TRM3YDL112W KEX2P13134 814 aa2.88□□□□□ -1.95
TRM3YDL112W YBL036CP38197 257 aa2.88□□□□□ -1.95
TRM3YDL112W YNR021WP53723 404 aaKnown RBP2.88□□□□□ -1.95
TRM3YDL112W HAP1P0CE41 1502 aa2.88□□□□□ -1.95
TRM3YDL112W NMA111P53920 997 aa2.88□□□□□ -1.95
TRM3YDL112W IQG1Q12280 1495 aa2.87□□□□□ -1.95
TRM3YDL112W YJU3P28321 313 aa2.87□□□□□ -1.95
TRM3YDL112W MAK21Q12176 1025 aaKnown RBP2.87□□□□□ -1.95
TRM3YDL112W HGH1P48362 394 aaKnown RBP2.87□□□□□ -1.95
TRM3YDL112W YPR204WQ08995 1032 aa2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms