RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN6YDL097C SSA1P10591 642 aaKnown RBP7.58□□□□□ -1.2
RPN6YDL097C URN1Q06525 465 aaKnown RBP7.56□□□□□ -1.2
RPN6YDL097C YAP5P40574 245 aa7.53□□□□□ -1.2
RPN6YDL097C SEC7P11075 2009 aaKnown RBP7.53□□□□□ -1.2
RPN6YDL097C NSR1P27476 414 aaKnown RBP RIP-Chip data7.52□□□□□ -1.2not detected
RPN6YDL097C YJL171CP46992 396 aa7.52□□□□□ -1.2
RPN6YDL097C YBT1P32386 1661 aa7.52□□□□□ -1.21
RPN6YDL097C BBC1P47068 1157 aa7.5□□□□□ -1.21
RPN6YDL097C AIR2Q12476 344 aaKnown RBP7.5□□□□□ -1.21
RPN6YDL097C NUP188P52593 1655 aaKnown RBP7.47□□□□□ -1.21
RPN6YDL097C FKH1P40466 484 aa7.46□□□□□ -1.22
RPN6YDL097C IML1P47170 1584 aa7.45□□□□□ -1.22
RPN6YDL097C TIF11P38912 153 aaKnown RBP7.45□□□□□ -1.22
RPN6YDL097C GTT3P39996 337 aa7.45□□□□□ -1.22
RPN6YDL097C AI2P03876 854 aa7.43□□□□□ -1.22
RPN6YDL097C VMR1P38735 1592 aa7.42□□□□□ -1.22
RPN6YDL097C BCK1Q01389 1478 aa7.41□□□□□ -1.22
RPN6YDL097C RSM7P47150 247 aa7.41□□□□□ -1.22
RPN6YDL097C PDR11P40550 1411 aa7.39□□□□□ -1.23
RPN6YDL097C LDB19Q12502 818 aa7.37□□□□□ -1.23
RPN6YDL097C IPL1P38991 367 aa7.35□□□□□ -1.23
RPN6YDL097C ENT1Q12518 454 aa7.34□□□□□ -1.23
RPN6YDL097C YBL086CP38177 466 aa7.33□□□□□ -1.24
RPN6YDL097C ULI1P43604 169 aa7.33□□□□□ -1.24
RPN6YDL097C BMT6Q12291 365 aa7.33□□□□□ -1.24
RPN6YDL097C CKB1P43639 278 aa7.32□□□□□ -1.24
RPN6YDL097C PIB1Q06651 286 aa7.32□□□□□ -1.24
RPN6YDL097C IMH1Q06704 911 aaKnown RBP7.32□□□□□ -1.24
RPN6YDL097C ENV9Q08651 330 aa7.32□□□□□ -1.24
RPN6YDL097C UBP1P25037 809 aa7.31□□□□□ -1.24
RPN6YDL097C UGA2P38067 497 aa7.28□□□□□ -1.24
RPN6YDL097C TYS1P36421 394 aaKnown RBP7.27□□□□□ -1.24
RPN6YDL097C IOC2Q12072 812 aa7.27□□□□□ -1.24
RPN6YDL097C CAT8P39113 1433 aa7.26□□□□□ -1.25
RPN6YDL097C IFH1P39520 1085 aa7.22□□□□□ -1.25
RPN6YDL097C GEA1P47102 1408 aaPredicted RBP7.21□□□□□ -1.26
RPN6YDL097C PDR5P33302 1511 aaKnown RBP7.19□□□□□ -1.26
RPN6YDL097C YRF1-2P40105 1681 aa7.18□□□□□ -1.26
RPN6YDL097C LEU3P08638 886 aa7.17□□□□□ -1.26
RPN6YDL097C SSA2P10592 639 aaKnown RBP7.17□□□□□ -1.26
RPN6YDL097C RTG1P32607 177 aa7.16□□□□□ -1.26
RPN6YDL097C RPN11P43588 306 aaKnown RBP7.16□□□□□ -1.26
RPN6YDL097C ALD2P47771 506 aa7.16□□□□□ -1.26
RPN6YDL097C EAP1P36041 632 aaKnown RBP7.15□□□□□ -1.26
RPN6YDL097C MSB4Q12317 492 aa7.15□□□□□ -1.26
RPN6YDL097C SET4P42948 560 aa7.14□□□□□ -1.27
RPN6YDL097C MRM1P25270 412 aa7.13□□□□□ -1.27
RPN6YDL097C YLR271WQ06152 274 aa7.13□□□□□ -1.27
RPN6YDL097C LYS4P49367 693 aaPredicted RBP7.12□□□□□ -1.27
RPN6YDL097C RIA1P53893 1110 aa7.12□□□□□ -1.27
RPN6YDL097C NCR1Q12200 1170 aa7.12□□□□□ -1.27
RPN6YDL097C KRE5P22023 1365 aa7.11□□□□□ -1.27
RPN6YDL097C TRP5P00931 707 aaKnown RBP7.11□□□□□ -1.27
RPN6YDL097C YNR029CP53729 429 aaKnown RBP7.11□□□□□ -1.27
RPN6YDL097C YOL036WQ08206 761 aa7.11□□□□□ -1.27
RPN6YDL097C PSD2P53037 1138 aaKnown RBP7.1□□□□□ -1.27
RPN6YDL097C SAS10Q12136 610 aaPredicted RBP7.09□□□□□ -1.27
RPN6YDL097C GCN2P15442 1659 aa7.09□□□□□ -1.27
RPN6YDL097C CFT1Q06632 1357 aaKnown RBP7.08□□□□□ -1.28
RPN6YDL097C SSA4P22202 642 aaKnown RBP7.07□□□□□ -1.28
RPN6YDL097C MRX12P47084 519 aa7.07□□□□□ -1.28
RPN6YDL097C TAF7Q05021 590 aa7.06□□□□□ -1.28
RPN6YDL097C EDE1P34216 1381 aa7.06□□□□□ -1.28
RPN6YDL097C YNL035CP53962 389 aaKnown RBP7.04□□□□□ -1.28
RPN6YDL097C YJL181WP46987 611 aa7.03□□□□□ -1.28
RPN6YDL097C RRP5Q05022 1729 aaKnown RBP7.03□□□□□ -1.28
RPN6YDL097C SEC61P32915 480 aa7.02□□□□□ -1.28
RPN6YDL097C NPR2P39923 615 aa7.02□□□□□ -1.28
RPN6YDL097C PEX21P50091 288 aa7.02□□□□□ -1.28
RPN6YDL097C CTH1P47976 325 aa7.01□□□□□ -1.29
RPN6YDL097C DOT5P40553 215 aa7.01□□□□□ -1.29
RPN6YDL097C TFG1P41895 735 aaPredicted RBP7.01□□□□□ -1.29
RPN6YDL097C PUS5Q06244 254 aa7.01□□□□□ -1.29
RPN6YDL097C DBP1P24784 617 aaKnown RBP7□□□□□ -1.29
RPN6YDL097C YMR1P47147 688 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
RPN6YDL097C PRP45P28004 379 aaPredicted RBP6.99□□□□□ -1.29
RPN6YDL097C BUD21Q08492 214 aaPredicted RBP6.99□□□□□ -1.29
RPN6YDL097C SDH2P21801 266 aa6.98□□□□□ -1.29
RPN6YDL097C SAP30P38429 201 aa6.97□□□□□ -1.29
RPN6YDL097C VMA1P17255 1071 aaKnown RBP6.96□□□□□ -1.3
RPN6YDL097C MAC1P35192 417 aa6.96□□□□□ -1.3
RPN6YDL097C SRB8P25648 1427 aa6.96□□□□□ -1.3
RPN6YDL097C BCK2P33306 851 aa6.95□□□□□ -1.3
RPN6YDL097C DUS1P53759 423 aaKnown RBP6.95□□□□□ -1.3
RPN6YDL097C TY3B-IQ7LHG5 1498 aaKnown RBP6.95□□□□□ -1.3
RPN6YDL097C URB1P34241 1764 aaKnown RBP6.93□□□□□ -1.3
RPN6YDL097C NUM1Q00402 2748 aa6.93□□□□□ -1.3
RPN6YDL097C PRP40P33203 583 aaKnown RBP6.93□□□□□ -1.3
RPN6YDL097C VPS29P38759 282 aa6.93□□□□□ -1.3
RPN6YDL097C FOX2Q02207 900 aaKnown RBP6.93□□□□□ -1.3
RPN6YDL097C STS1P38637 319 aa6.91□□□□□ -1.3
RPN6YDL097C LAM6Q08001 693 aa6.91□□□□□ -1.3
RPN6YDL097C EAF6P47128 113 aa6.9□□□□□ -1.3
RPN6YDL097C PSK1P31374 1356 aa6.9□□□□□ -1.31
RPN6YDL097C TAF5P38129 798 aa6.89□□□□□ -1.31
RPN6YDL097C RTG3P38165 486 aa6.89□□□□□ -1.31
RPN6YDL097C IES2P40154 320 aa6.89□□□□□ -1.31
RPN6YDL097C SQS1P53866 767 aaKnown RBP6.89□□□□□ -1.31
RPN6YDL097C SAM3Q08986 587 aa6.89□□□□□ -1.31
RPN6YDL097C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms