RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL020WYCL020W FPK1P53739 893 aa6.87□□□□□ -1.31
YCL020WYCL020W BUD20Q08004 166 aaPredicted RBP6.87□□□□□ -1.31
YCL020WYCL020W YML082WQ04533 649 aaKnown RBP6.86□□□□□ -1.31
YCL020WYCL020W TY1A-DR4O74302 440 aa6.85□□□□□ -1.31
YCL020WYCL020W TY1A-HP0C2I4 478 aaKnown RBP6.85□□□□□ -1.31
YCL020WYCL020W TY1A-AP0CX57 440 aa6.85□□□□□ -1.31
YCL020WYCL020W TY1A-PR1P0CX58 440 aa6.85□□□□□ -1.31
YCL020WYCL020W TY1A-ORP0CX59 440 aa6.85□□□□□ -1.31
YCL020WYCL020W TY1A-PR2P0CX60 440 aa6.85□□□□□ -1.31
YCL020WYCL020W TY1A-DR5P0CX65 440 aa6.85□□□□□ -1.31
YCL020WYCL020W TY1A-ER2P0CX66 440 aa6.85□□□□□ -1.31
YCL020WYCL020W TY1A-GR3P0CX67 440 aa6.85□□□□□ -1.31
YCL020WYCL020W TY1A-LR1P0CX68 440 aa6.85□□□□□ -1.31
YCL020WYCL020W TY1A-MR2P0CX69 440 aa6.85□□□□□ -1.31
YCL020WYCL020W CLB5P30283 435 aa6.85□□□□□ -1.31
YCL020WYCL020W TY1A-JR2P47099 440 aa6.85□□□□□ -1.31
YCL020WYCL020W SRC1Q03707 834 aa6.85□□□□□ -1.31
YCL020WYCL020W TY1A-DR1Q03856 440 aa6.85□□□□□ -1.31
YCL020WYCL020W TY1A-ML1Q04706 440 aaKnown RBP6.85□□□□□ -1.31
YCL020WYCL020W TY1A-BRQ12217 440 aa6.85□□□□□ -1.31
YCL020WYCL020W TY1A-NL2Q12470 440 aa6.85□□□□□ -1.31
YCL020WYCL020W TY1A-GR2Q12485 440 aa6.85□□□□□ -1.31
YCL020WYCL020W KTR1P27810 393 aaKnown RBP6.84□□□□□ -1.31
YCL020WYCL020W GUA1P38625 525 aaKnown RBP6.84□□□□□ -1.31
YCL020WYCL020W SEC2P17065 759 aa6.83□□□□□ -1.32
YCL020WYCL020W GCD11P32481 527 aaKnown RBP6.83□□□□□ -1.32
YCL020WYCL020W NPL4P33755 580 aa6.83□□□□□ -1.32
YCL020WYCL020W YMR196WQ04336 1088 aa6.83□□□□□ -1.32
YCL020WYCL020W ESS1P22696 170 aa6.81□□□□□ -1.32
YCL020WYCL020W SIT4P20604 311 aa6.8□□□□□ -1.32
YCL020WYCL020W CSN12P47130 423 aa6.78□□□□□ -1.32
YCL020WYCL020W GYP1Q08484 637 aa6.78□□□□□ -1.32
YCL020WYCL020W PRT1P06103 763 aaKnown RBP6.77□□□□□ -1.32
YCL020WYCL020W SLY41P22215 453 aa6.77□□□□□ -1.32
YCL020WYCL020W YJU3P28321 313 aa6.77□□□□□ -1.32
YCL020WYCL020W HST2P53686 357 aa6.77□□□□□ -1.32
YCL020WYCL020W YNL115CP53925 644 aa6.77□□□□□ -1.32
YCL020WYCL020W MMP1Q12372 583 aa6.76□□□□□ -1.33
YCL020WYCL020W GLN1P32288 370 aaKnown RBP6.76□□□□□ -1.33
YCL020WYCL020W RRN7P40992 514 aa6.76□□□□□ -1.33
YCL020WYCL020W SDH2P21801 266 aa6.75□□□□□ -1.33
YCL020WYCL020W PKH3Q03306 898 aaPredicted RBP6.75□□□□□ -1.33
YCL020WYCL020W AGE1Q04412 482 aa6.75□□□□□ -1.33
YCL020WYCL020W PAC1P39946 494 aaKnown RBP6.74□□□□□ -1.33
YCL020WYCL020W TUB4P53378 473 aa6.74□□□□□ -1.33
YCL020WYCL020W DMA2P53924 522 aa6.73□□□□□ -1.33
YCL020WYCL020W RTF1P53064 558 aa6.72□□□□□ -1.33
YCL020WYCL020W TFB3Q03290 321 aa6.71□□□□□ -1.34
YCL020WYCL020W TRM1P15565 570 aaKnown RBP6.7□□□□□ -1.34
YCL020WYCL020W PKC1P24583 1151 aa6.7□□□□□ -1.34
YCL020WYCL020W SPT16P32558 1035 aaKnown RBP6.68□□□□□ -1.34
YCL020WYCL020W RAD59Q12223 238 aa6.68□□□□□ -1.34
YCL020WYCL020W ARG8P18544 423 aa6.67□□□□□ -1.34
YCL020WYCL020W SSA2P10592 639 aaKnown RBP6.65□□□□□ -1.35
YCL020WYCL020W SAS4Q04003 481 aa6.65□□□□□ -1.35
YCL020WYCL020W YDL206WQ12424 762 aa6.65□□□□□ -1.35
YCL020WYCL020W RAS1P01119 309 aa6.64□□□□□ -1.35
YCL020WYCL020W RSC30P38781 883 aa6.64□□□□□ -1.35
YCL020WYCL020W CST6P40535 587 aa6.64□□□□□ -1.35
YCL020WYCL020W PUS6P53294 404 aa6.64□□□□□ -1.35
YCL020WYCL020W HPC2Q01448 625 aa6.64□□□□□ -1.35
YCL020WYCL020W TBF1Q02457 562 aa6.63□□□□□ -1.35
YCL020WYCL020W PDC1P06169 563 aaKnown RBP6.6□□□□□ -1.35
YCL020WYCL020W PAT1P25644 796 aaKnown RBP6.6□□□□□ -1.35
YCL020WYCL020W BRL1P38770 471 aa6.6□□□□□ -1.35
YCL020WYCL020W FRK1Q03002 865 aaPredicted RBP6.6□□□□□ -1.35
YCL020WYCL020W LAM6Q08001 693 aa6.6□□□□□ -1.35
YCL020WYCL020W ERG12P07277 443 aa6.58□□□□□ -1.36
YCL020WYCL020W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
YCL020WYCL020W BDP1P46678 594 aa6.58□□□□□ -1.36
YCL020WYCL020W PUS5Q06244 254 aa6.58□□□□□ -1.36
YCL020WYCL020W MOD5P07884 428 aa6.57□□□□□ -1.36
YCL020WYCL020W MRF1P30775 413 aaPredicted RBP6.56□□□□□ -1.36
YCL020WYCL020W YBL036CP38197 257 aa6.56□□□□□ -1.36
YCL020WYCL020W CLA4P48562 842 aa6.56□□□□□ -1.36
YCL020WYCL020W RPA14P50106 137 aa6.56□□□□□ -1.36
YCL020WYCL020W ITT1Q04638 464 aa6.56□□□□□ -1.36
YCL020WYCL020W AMS1P22855 1083 aa6.55□□□□□ -1.36
YCL020WYCL020W BIO2P32451 375 aa6.55□□□□□ -1.36
YCL020WYCL020W KXD1P53158 218 aa6.55□□□□□ -1.36
YCL020WYCL020W HXT10P43581 546 aa6.54□□□□□ -1.36
YCL020WYCL020W YJL007CP47080 104 aa6.54□□□□□ -1.36
YCL020WYCL020W YPR097WQ06839 1073 aa6.54□□□□□ -1.36
YCL020WYCL020W ALR1Q08269 859 aa6.54□□□□□ -1.36
YCL020WYCL020W YEL077CQ3E7X8 1277 aa6.53□□□□□ -1.36
YCL020WYCL020W RRD1P40454 393 aaKnown RBP6.52□□□□□ -1.37
YCL020WYCL020W MAK16P10962 306 aaPredicted RBP6.51□□□□□ -1.37
YCL020WYCL020W YDJ1P25491 409 aaKnown RBP6.51□□□□□ -1.37
YCL020WYCL020W ATG32P40458 529 aa6.51□□□□□ -1.37
YCL020WYCL020W BIM1P40013 344 aa6.5□□□□□ -1.37
YCL020WYCL020W AIR1P40507 360 aaKnown RBP6.5□□□□□ -1.37
YCL020WYCL020W YNL108CP53929 270 aa6.5□□□□□ -1.37
YCL020WYCL020W TRK1P12685 1235 aa6.49□□□□□ -1.37
YCL020WYCL020W ISF1P32488 338 aa6.48□□□□□ -1.37
YCL020WYCL020W FIG4P42837 879 aa6.48□□□□□ -1.37
YCL020WYCL020W TPD3P31383 635 aa6.47□□□□□ -1.37
YCL020WYCL020W YPL062WQ02781 134 aa6.47□□□□□ -1.37
YCL020WYCL020W ENO2P00925 437 aaKnown RBP6.45□□□□□ -1.38
YCL020WYCL020W CSE4P36012 229 aa6.45□□□□□ -1.38
YCL020WYCL020W TIF1P10081 395 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms