RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	ORC1	P54784	914 aa	Predicted RBP	8.05	□□□□□ -1.12
ATG12	YBR217W	REB1	P21538	810 aa		8.03	□□□□□ -1.12
ATG12	YBR217W	CPS1	P27614	576 aa		8.03	□□□□□ -1.12
ATG12	YBR217W	PPH3	P32345	308 aa		8.03	□□□□□ -1.12
ATG12	YBR217W	KIP3	P53086	805 aa	Known RBP	8.03	□□□□□ -1.12
ATG12	YBR217W	SPE2	P21182	396 aa		8.02	□□□□□ -1.13
ATG12	YBR217W	ENT1	Q12518	454 aa		8.02	□□□□□ -1.13
ATG12	YBR217W	RRP5	Q05022	1729 aa	Known RBP	8	□□□□□ -1.13
ATG12	YBR217W	TY4B-H	P0C2J7	1802 aa		7.99	□□□□□ -1.13
ATG12	YBR217W	TY4B-J	P47024	1803 aa		7.99	□□□□□ -1.13
ATG12	YBR217W	YIL055C	P40523	627 aa	Known RBP	7.99	□□□□□ -1.13
ATG12	YBR217W	ENV9	Q08651	330 aa		7.99	□□□□□ -1.13
ATG12	YBR217W	GLN1	P32288	370 aa	Known RBP	7.98	□□□□□ -1.13
ATG12	YBR217W	PRP45	P28004	379 aa	Predicted RBP	7.97	□□□□□ -1.13
ATG12	YBR217W	CHZ1	P40019	153 aa	Predicted RBP	7.96	□□□□□ -1.14
ATG12	YBR217W	PSK1	P31374	1356 aa		7.95	□□□□□ -1.14
ATG12	YBR217W	PRP5	P21372	849 aa	Predicted RBP	7.93	□□□□□ -1.14
ATG12	YBR217W	YLR419W	Q06698	1435 aa	Known RBP	7.93	□□□□□ -1.14
ATG12	YBR217W	IMH1	Q06704	911 aa	Known RBP	7.92	□□□□□ -1.14
ATG12	YBR217W	ADE6	P38972	1358 aa	Known RBP	7.91	□□□□□ -1.14
ATG12	YBR217W	YRF1-2	P40105	1681 aa		7.91	□□□□□ -1.14
ATG12	YBR217W	LEU2	P04173	364 aa	Predicted RBP	7.89	□□□□□ -1.15
ATG12	YBR217W	CSE4	P36012	229 aa		7.89	□□□□□ -1.15
ATG12	YBR217W	MSB3	P48566	633 aa	Predicted RBP	7.89	□□□□□ -1.15
ATG12	YBR217W	MLP1	Q02455	1875 aa	Known RBP	7.89	□□□□□ -1.15
ATG12	YBR217W	RPS24A	P0CX31	135 aa	Known RBP	7.88	□□□□□ -1.15
ATG12	YBR217W	RPS24B	P0CX32	135 aa	Known RBP	7.88	□□□□□ -1.15
ATG12	YBR217W	YMR074C	Q04773	145 aa		7.87	□□□□□ -1.15
ATG12	YBR217W	MTR4	P47047	1073 aa	Known RBP	7.86	□□□□□ -1.15
ATG12	YBR217W	PRP43	P53131	767 aa	Known RBP	7.86	□□□□□ -1.15
ATG12	YBR217W	YML133C	Q03099	1374 aa		7.85	□□□□□ -1.15
ATG12	YBR217W	YLL067C	Q07888	1374 aa		7.85	□□□□□ -1.15
ATG12	YBR217W	YLL066C	Q99208	1374 aa		7.85	□□□□□ -1.15
ATG12	YBR217W	URB1	P34241	1764 aa	Known RBP	7.85	□□□□□ -1.15
ATG12	YBR217W	YIL177C	P40434	1758 aa		7.85	□□□□□ -1.15
ATG12	YBR217W	YJL225C	P40889	1758 aa		7.85	□□□□□ -1.15
ATG12	YBR217W	YRF1-3	P0CX14	1859 aa		7.84	□□□□□ -1.15
ATG12	YBR217W	YRF1-7	P0CX15	1859 aa		7.84	□□□□□ -1.15
ATG12	YBR217W	YRF1-6	P53819	1859 aa		7.84	□□□□□ -1.15
ATG12	YBR217W	SLM3	Q12093	417 aa		7.83	□□□□□ -1.16
ATG12	YBR217W	TCB1	Q12466	1186 aa		7.83	□□□□□ -1.16
ATG12	YBR217W	LEU3	P08638	886 aa		7.82	□□□□□ -1.16
ATG12	YBR217W	SCT1	P32784	759 aa		7.82	□□□□□ -1.16
ATG12	YBR217W	RTG3	P38165	486 aa		7.82	□□□□□ -1.16
ATG12	YBR217W	IES2	P40154	320 aa		7.82	□□□□□ -1.16
ATG12	YBR217W	FKH1	P40466	484 aa		7.82	□□□□□ -1.16
ATG12	YBR217W	FKS3	Q04952	1785 aa		7.82	□□□□□ -1.16
ATG12	YBR217W	POL5	P39985	1022 aa	Known RBP	7.8	□□□□□ -1.16
ATG12	YBR217W	DOT5	P40553	215 aa		7.8	□□□□□ -1.16
ATG12	YBR217W	GAS4	Q08271	471 aa		7.79	□□□□□ -1.16
ATG12	YBR217W	BUD31	P25337	157 aa	Predicted RBP	7.78	□□□□□ -1.16
ATG12	YBR217W	XKS1	P42826	600 aa		7.78	□□□□□ -1.16
ATG12	YBR217W	RSF2	P46974	1380 aa		7.78	□□□□□ -1.16
ATG12	YBR217W	DPS1	P04802	557 aa	Known RBP	7.77	□□□□□ -1.17
ATG12	YBR217W	RPN11	P43588	306 aa	Known RBP	7.77	□□□□□ -1.17
ATG12	YBR217W	PDS5	Q04264	1277 aa		7.77	□□□□□ -1.17
ATG12	YBR217W	APC1	P53886	1748 aa		7.75	□□□□□ -1.17
ATG12	YBR217W	MHP1	P43638	1398 aa		7.75	□□□□□ -1.17
ATG12	YBR217W	PDI1	P17967	522 aa	Known RBP	7.75	□□□□□ -1.17
ATG12	YBR217W	ENP1	P38333	483 aa	Known RBP	7.75	□□□□□ -1.17
ATG12	YBR217W	RTF1	P53064	558 aa		7.75	□□□□□ -1.17
ATG12	YBR217W	FOX2	Q02207	900 aa	Known RBP	7.75	□□□□□ -1.17
ATG12	YBR217W	YKL133C	P36066	463 aa		7.74	□□□□□ -1.17
ATG12	YBR217W	HIM1	Q06674	414 aa		7.74	□□□□□ -1.17
ATG12	YBR217W	TSR3	Q12094	313 aa	Known RBP	7.74	□□□□□ -1.17
ATG12	YBR217W	ROM2	P51862	1356 aa	Known RBP	7.72	□□□□□ -1.17
ATG12	YBR217W	AUS1	Q08409	1394 aa		7.71	□□□□□ -1.17
ATG12	YBR217W	COB	P00163	385 aa		7.71	□□□□□ -1.18
ATG12	YBR217W	YEF3	P16521	1044 aa	Known RBP	7.71	□□□□□ -1.18
ATG12	YBR217W	UBP1	P25037	809 aa		7.71	□□□□□ -1.18
ATG12	YBR217W	RCR1	P38212	213 aa		7.71	□□□□□ -1.18
ATG12	YBR217W	NPR2	P39923	615 aa		7.71	□□□□□ -1.18
ATG12	YBR217W	TAP42	Q04372	366 aa		7.71	□□□□□ -1.18
ATG12	YBR217W	YJL181W	P46987	611 aa		7.7	□□□□□ -1.18
ATG12	YBR217W	GRX4	P32642	244 aa		7.69	□□□□□ -1.18
ATG12	YBR217W	LYS4	P49367	693 aa	Predicted RBP	7.69	□□□□□ -1.18
ATG12	YBR217W	NST1	P53935	1240 aa		7.69	□□□□□ -1.18
ATG12	YBR217W	ISW2	Q08773	1120 aa		7.69	□□□□□ -1.18
ATG12	YBR217W	YRF1-4	O13559	1382 aa		7.69	□□□□□ -1.18
ATG12	YBR217W	YKR075C	P36155	307 aa		7.68	□□□□□ -1.18
ATG12	YBR217W	LAM6	Q08001	693 aa		7.68	□□□□□ -1.18
ATG12	YBR217W	FRK1	Q03002	865 aa	Predicted RBP	7.67	□□□□□ -1.18
ATG12	YBR217W	SNF2	P22082	1703 aa		7.66	□□□□□ -1.18
ATG12	YBR217W	PRP40	P33203	583 aa	Known RBP	7.66	□□□□□ -1.18
ATG12	YBR217W	YBL086C	P38177	466 aa		7.66	□□□□□ -1.18
ATG12	YBR217W	ADE16	P54113	591 aa	Known RBP	7.66	□□□□□ -1.18
ATG12	YBR217W	SEC3	P33332	1336 aa	Known RBP	7.66	□□□□□ -1.18
ATG12	YBR217W	KAR2	P16474	682 aa	Known RBP	7.65	□□□□□ -1.18
ATG12	YBR217W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	7.65	□□□□□ -1.18	not detected
ATG12	YBR217W	MEC3	Q02574	474 aa		7.65	□□□□□ -1.18
ATG12	YBR217W	SIR4	P11978	1358 aa		7.64	□□□□□ -1.19
ATG12	YBR217W	TRK1	P12685	1235 aa		7.64	□□□□□ -1.19
ATG12	YBR217W	RPG1	P38249	964 aa	Known RBP	7.64	□□□□□ -1.19
ATG12	YBR217W	RIM15	P43565	1770 aa		7.64	□□□□□ -1.19
ATG12	YBR217W	PSD2	P53037	1138 aa	Known RBP	7.63	□□□□□ -1.19
ATG12	YBR217W	PAP2	P53632	584 aa	Known RBP	7.63	□□□□□ -1.19
ATG12	YBR217W	RPO41	P13433	1351 aa	Known RBP	7.61	□□□□□ -1.19
ATG12	YBR217W	EDE1	P34216	1381 aa		7.61	□□□□□ -1.19
ATG12	YBR217W	UGA2	P38067	497 aa		7.61	□□□□□ -1.19
ATG12	YBR217W	CTH1	P47976	325 aa		7.61	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms