RNA–Protein interactions for RNA: YBR125C

PTC4, Transcript of Cytoplasmic type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC4, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC4YBR125C TY1B-MR2Q04670 1755 aaKnown RBP9.93□□□□□ -0.82
PTC4YBR125C TY1B-LR1Q12088 1755 aaKnown RBP9.93□□□□□ -0.82
PTC4YBR125C TY1B-NL1Q12112 1755 aa9.93□□□□□ -0.82
PTC4YBR125C TY1B-GR1Q12141 1755 aa9.93□□□□□ -0.82
PTC4YBR125C TY1B-BLQ12490 1755 aa9.93□□□□□ -0.82
PTC4YBR125C MPH3P0CE00 602 aa9.93□□□□□ -0.82
PTC4YBR125C SAP30P38429 201 aa9.93□□□□□ -0.82
PTC4YBR125C PML39Q03760 334 aa9.93□□□□□ -0.82
PTC4YBR125C YPR148CQ06523 435 aa9.92□□□□□ -0.82
PTC4YBR125C YDL129WQ07555 291 aa9.92□□□□□ -0.82
PTC4YBR125C VTH1P40438 1549 aa9.92□□□□□ -0.82
PTC4YBR125C VTH2P40890 1549 aa9.92□□□□□ -0.82
PTC4YBR125C AI4P03878 556 aa9.91□□□□□ -0.82
PTC4YBR125C ILV3P39522 585 aaKnown RBP9.91□□□□□ -0.82
PTC4YBR125C VHR2P40041 505 aa9.9□□□□□ -0.82
PTC4YBR125C TSC11P40061 1430 aa9.89□□□□□ -0.83
PTC4YBR125C MID1P41821 548 aa9.88□□□□□ -0.83
PTC4YBR125C TRM732Q03496 1420 aa9.87□□□□□ -0.83
PTC4YBR125C SNQ2P32568 1501 aaKnown RBP9.87□□□□□ -0.83
PTC4YBR125C KEX1P09620 729 aa9.86□□□□□ -0.83
PTC4YBR125C UBP14P38237 781 aaKnown RBP9.86□□□□□ -0.83
PTC4YBR125C SAS10Q12136 610 aaPredicted RBP9.86□□□□□ -0.83
PTC4YBR125C MLP2P40457 1679 aa9.84□□□□□ -0.83
PTC4YBR125C NTE1Q04958 1679 aa9.84□□□□□ -0.83
PTC4YBR125C YLR326WQ06170 240 aaKnown RBP9.84□□□□□ -0.83
PTC4YBR125C REF2P42073 533 aaPredicted RBP9.82□□□□□ -0.84
PTC4YBR125C RPO21P04050 1733 aaKnown RBP9.82□□□□□ -0.84
PTC4YBR125C ULS1Q08562 1619 aa9.81□□□□□ -0.84
PTC4YBR125C STH1P32597 1359 aa9.8□□□□□ -0.84
PTC4YBR125C SLI15P38283 698 aa9.8□□□□□ -0.84
PTC4YBR125C PEX29Q03370 554 aa9.79□□□□□ -0.84
PTC4YBR125C MET5P47169 1442 aa9.79□□□□□ -0.84
PTC4YBR125C YRF1-1P0CX20 1796 aa9.78□□□□□ -0.84
PTC4YBR125C YRF1-5P0CX21 1796 aa9.78□□□□□ -0.84
PTC4YBR125C YRF1-8P0CX22 1796 aa9.78□□□□□ -0.84
PTC4YBR125C PDR15Q04182 1529 aaKnown RBP9.77□□□□□ -0.84
PTC4YBR125C RAD54P32863 898 aa9.77□□□□□ -0.85
PTC4YBR125C NUP159P40477 1460 aa9.77□□□□□ -0.85
PTC4YBR125C SNT2P53127 1403 aa9.76□□□□□ -0.85
PTC4YBR125C PCS60P38137 543 aaKnown RBP RIP-Chip data9.76□□□□□ -0.85not detected
PTC4YBR125C CKB1P43639 278 aa9.75□□□□□ -0.85
PTC4YBR125C YDR344CQ05510 147 aa9.75□□□□□ -0.85
PTC4YBR125C KIC1P38692 1080 aa9.74□□□□□ -0.85
PTC4YBR125C YDR090CQ03193 310 aa9.74□□□□□ -0.85
PTC4YBR125C ELP4Q02884 456 aaKnown RBP9.72□□□□□ -0.85
PTC4YBR125C MPC54Q08550 464 aa9.7□□□□□ -0.86
PTC4YBR125C PBS2P08018 668 aa9.68□□□□□ -0.86
PTC4YBR125C PRE3P38624 215 aa9.68□□□□□ -0.86
PTC4YBR125C CDC73Q06697 393 aa9.68□□□□□ -0.86
PTC4YBR125C CHL1P22516 861 aaPredicted RBP9.67□□□□□ -0.86
PTC4YBR125C TAF7Q05021 590 aa9.67□□□□□ -0.86
PTC4YBR125C COX6P00427 148 aa9.66□□□□□ -0.86
PTC4YBR125C ARH1P48360 493 aa9.66□□□□□ -0.86
PTC4YBR125C DPL1Q05567 589 aa9.66□□□□□ -0.86
PTC4YBR125C GEA2P39993 1459 aaKnown RBP9.66□□□□□ -0.86
PTC4YBR125C SPB4P25808 606 aaPredicted RBP9.65□□□□□ -0.86
PTC4YBR125C IRC20Q06554 1556 aa9.65□□□□□ -0.86
PTC4YBR125C VPS15P22219 1454 aa9.65□□□□□ -0.87
PTC4YBR125C NMA111P53920 997 aa9.64□□□□□ -0.87
PTC4YBR125C MAK21Q12176 1025 aaKnown RBP9.64□□□□□ -0.87
PTC4YBR125C SPO14P36126 1683 aa9.64□□□□□ -0.87
PTC4YBR125C GEA1P47102 1408 aaPredicted RBP9.64□□□□□ -0.87
PTC4YBR125C RTT106P40161 455 aa9.62□□□□□ -0.87
PTC4YBR125C HAP5Q02516 242 aa9.62□□□□□ -0.87
PTC4YBR125C TY3B-GQ99315 1547 aa9.61□□□□□ -0.87
PTC4YBR125C LTE1P07866 1435 aa9.6□□□□□ -0.87
PTC4YBR125C PDR12Q02785 1511 aa9.59□□□□□ -0.87
PTC4YBR125C YBT1P32386 1661 aa9.58□□□□□ -0.88
PTC4YBR125C RPP1BP10622 106 aaKnown RBP9.58□□□□□ -0.88
PTC4YBR125C ISU2Q12056 156 aa9.57□□□□□ -0.88
PTC4YBR125C GDB1Q06625 1536 aa9.56□□□□□ -0.88
PTC4YBR125C MET10P39692 1035 aa9.56□□□□□ -0.88
PTC4YBR125C MAM3Q12296 706 aa9.56□□□□□ -0.88
PTC4YBR125C SPT23P35210 1082 aa9.55□□□□□ -0.88
PTC4YBR125C DSF2P38213 736 aa9.54□□□□□ -0.88
PTC4YBR125C NUP157P40064 1391 aaKnown RBP9.52□□□□□ -0.88
PTC4YBR125C BNI1P41832 1953 aa9.52□□□□□ -0.89
PTC4YBR125C PDR10P51533 1564 aa9.52□□□□□ -0.89
PTC4YBR125C PEX21P50091 288 aa9.51□□□□□ -0.89
PTC4YBR125C BNI4P53858 892 aa9.51□□□□□ -0.89
PTC4YBR125C ORC6P38826 435 aa9.5□□□□□ -0.89
PTC4YBR125C IES2P40154 320 aa9.5□□□□□ -0.89
PTC4YBR125C PTC2P39966 464 aaKnown RBP9.49□□□□□ -0.89
PTC4YBR125C CAT8P39113 1433 aa9.48□□□□□ -0.89
PTC4YBR125C NUP170P38181 1502 aa9.48□□□□□ -0.89
PTC4YBR125C VRP1P37370 817 aa9.48□□□□□ -0.89
PTC4YBR125C ARO1P08566 1588 aaKnown RBP9.47□□□□□ -0.89
PTC4YBR125C BCK2P33306 851 aa9.47□□□□□ -0.89
PTC4YBR125C CSC1Q06538 782 aa9.47□□□□□ -0.89
PTC4YBR125C PDR1P12383 1068 aa9.46□□□□□ -0.9
PTC4YBR125C YRR1Q12172 810 aa9.46□□□□□ -0.9
PTC4YBR125C BUD3P25558 1636 aa9.45□□□□□ -0.9
PTC4YBR125C GAP1P19145 602 aaPredicted RBP9.45□□□□□ -0.9
PTC4YBR125C TUM1Q08686 304 aaKnown RBP9.45□□□□□ -0.9
PTC4YBR125C IQG1Q12280 1495 aa9.45□□□□□ -0.9
PTC4YBR125C ITT1Q04638 464 aa9.44□□□□□ -0.9
PTC4YBR125C DRS2P39524 1355 aa9.44□□□□□ -0.9
PTC4YBR125C IKI3Q06706 1349 aaKnown RBP9.43□□□□□ -0.9
PTC4YBR125C MVP1P40959 511 aaKnown RBP9.43□□□□□ -0.9
PTC4YBR125C TFB4Q12004 338 aa9.43□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms