RNA–Protein interactions for RNA: YBL056W

PTC3, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC3, Length 1,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC3YBL056W KIP3P53086 805 aaKnown RBP8.71□□□□□ -1.01
PTC3YBL056W NAP1P25293 417 aaKnown RBP8.71□□□□□ -1.02
PTC3YBL056W PRY3P47033 881 aa8.71□□□□□ -1.02
PTC3YBL056W SPE2P21182 396 aa8.7□□□□□ -1.02
PTC3YBL056W ORC1P54784 914 aaPredicted RBP8.7□□□□□ -1.02
PTC3YBL056W YLR419WQ06698 1435 aaKnown RBP8.69□□□□□ -1.02
PTC3YBL056W POL5P39985 1022 aaKnown RBP8.66□□□□□ -1.02
PTC3YBL056W RCM1P53972 490 aa8.65□□□□□ -1.02
PTC3YBL056W CPS1P27614 576 aa8.63□□□□□ -1.03
PTC3YBL056W PPH3P32345 308 aa8.63□□□□□ -1.03
PTC3YBL056W CHZ1P40019 153 aaPredicted RBP8.61□□□□□ -1.03
PTC3YBL056W PTP3P40048 928 aa8.61□□□□□ -1.03
PTC3YBL056W TSR3Q12094 313 aaKnown RBP8.61□□□□□ -1.03
PTC3YBL056W PSK1P31374 1356 aa8.6□□□□□ -1.03
PTC3YBL056W SCT1P32784 759 aa8.57□□□□□ -1.04
PTC3YBL056W MHP1P43638 1398 aa8.57□□□□□ -1.04
PTC3YBL056W YML133CQ03099 1374 aa8.56□□□□□ -1.04
PTC3YBL056W YLL067CQ07888 1374 aa8.56□□□□□ -1.04
PTC3YBL056W YLL066CQ99208 1374 aa8.56□□□□□ -1.04
PTC3YBL056W ADE6P38972 1358 aaKnown RBP8.55□□□□□ -1.04
PTC3YBL056W FKH1P40466 484 aa8.54□□□□□ -1.04
PTC3YBL056W YAH1Q12184 172 aaKnown RBP8.52□□□□□ -1.05
PTC3YBL056W LEU2P04173 364 aaPredicted RBP8.51□□□□□ -1.05
PTC3YBL056W PDS5Q04264 1277 aa8.51□□□□□ -1.05
PTC3YBL056W RTG3P38165 486 aa8.5□□□□□ -1.05
PTC3YBL056W MTR4P47047 1073 aaKnown RBP8.5□□□□□ -1.05
PTC3YBL056W PRP43P53131 767 aaKnown RBP8.49□□□□□ -1.05
PTC3YBL056W APP1P53933 587 aa8.48□□□□□ -1.05
PTC3YBL056W TY4B-HP0C2J7 1802 aa8.47□□□□□ -1.05
PTC3YBL056W TY4B-JP47024 1803 aa8.47□□□□□ -1.05
PTC3YBL056W PRP45P28004 379 aaPredicted RBP8.46□□□□□ -1.05
PTC3YBL056W SPT21P35209 758 aa8.46□□□□□ -1.05
PTC3YBL056W RRP5Q05022 1729 aaKnown RBP8.46□□□□□ -1.06
PTC3YBL056W RPS24AP0CX31 135 aaKnown RBP8.46□□□□□ -1.06
PTC3YBL056W RPS24BP0CX32 135 aaKnown RBP8.46□□□□□ -1.06
PTC3YBL056W PRP5P21372 849 aaPredicted RBP8.46□□□□□ -1.06
PTC3YBL056W CSE4P36012 229 aa8.46□□□□□ -1.06
PTC3YBL056W ENT1Q12518 454 aa8.46□□□□□ -1.06
PTC3YBL056W MLP1Q02455 1875 aaKnown RBP8.44□□□□□ -1.06
PTC3YBL056W NST1P53935 1240 aa8.43□□□□□ -1.06
PTC3YBL056W ENV9Q08651 330 aa8.43□□□□□ -1.06
PTC3YBL056W PSD2P53037 1138 aaKnown RBP8.42□□□□□ -1.06
PTC3YBL056W PDI1P17967 522 aaKnown RBP8.41□□□□□ -1.06
PTC3YBL056W MSB3P48566 633 aaPredicted RBP8.41□□□□□ -1.06
PTC3YBL056W YRF1-2P40105 1681 aa8.4□□□□□ -1.06
PTC3YBL056W MRPL32P25348 183 aa8.4□□□□□ -1.06
PTC3YBL056W TAP42Q04372 366 aa8.4□□□□□ -1.06
PTC3YBL056W AUS1Q08409 1394 aa8.4□□□□□ -1.07
PTC3YBL056W SEC3P33332 1336 aaKnown RBP8.39□□□□□ -1.07
PTC3YBL056W YEF3P16521 1044 aaKnown RBP8.39□□□□□ -1.07
PTC3YBL056W RIM101P33400 625 aa8.39□□□□□ -1.07
PTC3YBL056W SLM3Q12093 417 aa8.39□□□□□ -1.07
PTC3YBL056W SPT7P35177 1332 aa8.39□□□□□ -1.07
PTC3YBL056W RTF1P53064 558 aa8.38□□□□□ -1.07
PTC3YBL056W YIL055CP40523 627 aaKnown RBP8.37□□□□□ -1.07
PTC3YBL056W HIM1Q06674 414 aa8.37□□□□□ -1.07
PTC3YBL056W GAS4Q08271 471 aa8.37□□□□□ -1.07
PTC3YBL056W DPS1P04802 557 aaKnown RBP8.36□□□□□ -1.07
PTC3YBL056W GRX4P32642 244 aa8.36□□□□□ -1.07
PTC3YBL056W IMH1Q06704 911 aaKnown RBP8.36□□□□□ -1.07
PTC3YBL056W TCB1Q12466 1186 aa8.36□□□□□ -1.07
PTC3YBL056W YIL177CP40434 1758 aa8.35□□□□□ -1.07
PTC3YBL056W YJL225CP40889 1758 aa8.35□□□□□ -1.07
PTC3YBL056W TRK1P12685 1235 aa8.35□□□□□ -1.07
PTC3YBL056W RSF2P46974 1380 aa8.34□□□□□ -1.07
PTC3YBL056W LEU3P08638 886 aa8.33□□□□□ -1.08
PTC3YBL056W HAA1Q12753 694 aaKnown RBP8.33□□□□□ -1.08
PTC3YBL056W KAR2P16474 682 aaKnown RBP8.32□□□□□ -1.08
PTC3YBL056W IES2P40154 320 aa8.31□□□□□ -1.08
PTC3YBL056W XKS1P42826 600 aa8.31□□□□□ -1.08
PTC3YBL056W GLN1P32288 370 aaKnown RBP8.29□□□□□ -1.08
PTC3YBL056W URB1P34241 1764 aaKnown RBP8.29□□□□□ -1.08
PTC3YBL056W RPO41P13433 1351 aaKnown RBP8.29□□□□□ -1.08
PTC3YBL056W APC1P53886 1748 aa8.29□□□□□ -1.08
PTC3YBL056W FKS3Q04952 1785 aa8.27□□□□□ -1.09
PTC3YBL056W RRP46P53256 223 aaPredicted RBP8.27□□□□□ -1.09
PTC3YBL056W YRF1-3P0CX14 1859 aa8.26□□□□□ -1.09
PTC3YBL056W YRF1-7P0CX15 1859 aa8.26□□□□□ -1.09
PTC3YBL056W YRF1-6P53819 1859 aa8.26□□□□□ -1.09
PTC3YBL056W RCR1P38212 213 aa8.26□□□□□ -1.09
PTC3YBL056W DOT5P40553 215 aa8.26□□□□□ -1.09
PTC3YBL056W PAP2P53632 584 aaKnown RBP8.26□□□□□ -1.09
PTC3YBL056W IOC4Q04213 475 aa8.26□□□□□ -1.09
PTC3YBL056W YMR074CQ04773 145 aa8.26□□□□□ -1.09
PTC3YBL056W SIR4P11978 1358 aa8.26□□□□□ -1.09
PTC3YBL056W ENP1P38333 483 aaKnown RBP8.25□□□□□ -1.09
PTC3YBL056W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
PTC3YBL056W ROM2P51862 1356 aaKnown RBP8.25□□□□□ -1.09
PTC3YBL056W YKL133CP36066 463 aa8.24□□□□□ -1.09
PTC3YBL056W FOX2Q02207 900 aaKnown RBP8.23□□□□□ -1.09
PTC3YBL056W AKL1P38080 1108 aaKnown RBP8.22□□□□□ -1.09
PTC3YBL056W DSD1P53095 428 aa8.22□□□□□ -1.09
PTC3YBL056W YRF1-4O13559 1382 aa8.22□□□□□ -1.09
PTC3YBL056W ADE16P54113 591 aaKnown RBP8.2□□□□□ -1.1
PTC3YBL056W RTR1P40084 226 aaPredicted RBP8.2□□□□□ -1.1
PTC3YBL056W MEC3Q02574 474 aa8.2□□□□□ -1.1
PTC3YBL056W SNF2P22082 1703 aa8.19□□□□□ -1.1
PTC3YBL056W COBP00163 385 aa8.19□□□□□ -1.1
PTC3YBL056W RPN11P43588 306 aaKnown RBP8.19□□□□□ -1.1
PTC3YBL056W FRK1Q03002 865 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 83.4 ms