RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C ENV9Q08651 330 aa9.83□□□□□ -0.84
LDB7YBL006C IMH1Q06704 911 aaKnown RBP9.79□□□□□ -0.84
LDB7YBL006C CPS1P27614 576 aa9.78□□□□□ -0.84
LDB7YBL006C TAF8Q03750 510 aa9.76□□□□□ -0.85
LDB7YBL006C RCM1P53972 490 aa9.75□□□□□ -0.85
LDB7YBL006C URB1P34241 1764 aaKnown RBP9.74□□□□□ -0.85
LDB7YBL006C NAP1P25293 417 aaKnown RBP9.74□□□□□ -0.85
LDB7YBL006C PRI1P10363 409 aa9.73□□□□□ -0.85
LDB7YBL006C BUD31P25337 157 aaPredicted RBP9.73□□□□□ -0.85
LDB7YBL006C PRP45P28004 379 aaPredicted RBP9.73□□□□□ -0.85
LDB7YBL006C ESL2P36168 1195 aa9.73□□□□□ -0.85
LDB7YBL006C PPH3P32345 308 aa9.72□□□□□ -0.85
LDB7YBL006C TAF5P38129 798 aa9.72□□□□□ -0.85
LDB7YBL006C ADE6P38972 1358 aaKnown RBP9.72□□□□□ -0.85
LDB7YBL006C FKS3Q04952 1785 aa9.71□□□□□ -0.85
LDB7YBL006C AAD16Q02895 342 aa9.7□□□□□ -0.86
LDB7YBL006C PSK1P31374 1356 aa9.68□□□□□ -0.86
LDB7YBL006C PRP5P21372 849 aaPredicted RBP9.67□□□□□ -0.86
LDB7YBL006C YIL177CP40434 1758 aa9.65□□□□□ -0.86
LDB7YBL006C YJL225CP40889 1758 aa9.65□□□□□ -0.86
LDB7YBL006C MSB3P48566 633 aaPredicted RBP9.64□□□□□ -0.87
LDB7YBL006C YRF1-3P0CX14 1859 aa9.64□□□□□ -0.87
LDB7YBL006C YRF1-7P0CX15 1859 aa9.64□□□□□ -0.87
LDB7YBL006C YRF1-6P53819 1859 aa9.64□□□□□ -0.87
LDB7YBL006C SPE2P21182 396 aa9.61□□□□□ -0.87
LDB7YBL006C RSF2P46974 1380 aa9.61□□□□□ -0.87
LDB7YBL006C EDE1P34216 1381 aa9.59□□□□□ -0.87
LDB7YBL006C APC1P53886 1748 aa9.59□□□□□ -0.87
LDB7YBL006C YLR419WQ06698 1435 aaKnown RBP9.58□□□□□ -0.88
LDB7YBL006C DOT5P40553 215 aa9.58□□□□□ -0.88
LDB7YBL006C ROM2P51862 1356 aaKnown RBP9.58□□□□□ -0.88
LDB7YBL006C LEU3P08638 886 aa9.57□□□□□ -0.88
LDB7YBL006C UBP1P25037 809 aa9.57□□□□□ -0.88
LDB7YBL006C IES2P40154 320 aa9.57□□□□□ -0.88
LDB7YBL006C RPN11P43588 306 aaKnown RBP9.57□□□□□ -0.88
LDB7YBL006C KIP3P53086 805 aaKnown RBP9.57□□□□□ -0.88
LDB7YBL006C PRP43P53131 767 aaKnown RBP9.55□□□□□ -0.88
LDB7YBL006C FOX2Q02207 900 aaKnown RBP9.55□□□□□ -0.88
LDB7YBL006C YML133CQ03099 1374 aa9.54□□□□□ -0.88
LDB7YBL006C YLL067CQ07888 1374 aa9.54□□□□□ -0.88
LDB7YBL006C YLL066CQ99208 1374 aa9.54□□□□□ -0.88
LDB7YBL006C SLM3Q12093 417 aa9.54□□□□□ -0.88
LDB7YBL006C TCB1Q12466 1186 aa9.54□□□□□ -0.88
LDB7YBL006C YBL086CP38177 466 aa9.52□□□□□ -0.89
LDB7YBL006C MTR4P47047 1073 aaKnown RBP9.52□□□□□ -0.89
LDB7YBL006C NPR2P39923 615 aa9.51□□□□□ -0.89
LDB7YBL006C LEU2P04173 364 aaPredicted RBP9.5□□□□□ -0.89
LDB7YBL006C RPS24AP0CX31 135 aaKnown RBP9.49□□□□□ -0.89
LDB7YBL006C RPS24BP0CX32 135 aaKnown RBP9.49□□□□□ -0.89
LDB7YBL006C CSE4P36012 229 aa9.49□□□□□ -0.89
LDB7YBL006C SNF2P22082 1703 aa9.48□□□□□ -0.89
LDB7YBL006C CHZ1P40019 153 aaPredicted RBP9.48□□□□□ -0.89
LDB7YBL006C LYS4P49367 693 aaPredicted RBP9.47□□□□□ -0.89
LDB7YBL006C YEF3P16521 1044 aaKnown RBP9.46□□□□□ -0.9
LDB7YBL006C GTT3P39996 337 aa9.46□□□□□ -0.9
LDB7YBL006C XKS1P42826 600 aa9.45□□□□□ -0.9
LDB7YBL006C MLP1Q02455 1875 aaKnown RBP9.45□□□□□ -0.9
LDB7YBL006C YKL133CP36066 463 aa9.44□□□□□ -0.9
LDB7YBL006C YKR075CP36155 307 aa9.44□□□□□ -0.9
LDB7YBL006C YRF1-4O13559 1382 aa9.43□□□□□ -0.9
LDB7YBL006C COBP00163 385 aa9.43□□□□□ -0.9
LDB7YBL006C YJL181WP46987 611 aa9.43□□□□□ -0.9
LDB7YBL006C CTH1P47976 325 aa9.43□□□□□ -0.9
LDB7YBL006C PRP40P33203 583 aaKnown RBP9.42□□□□□ -0.9
LDB7YBL006C UGA2P38067 497 aa9.42□□□□□ -0.9
LDB7YBL006C LAM6Q08001 693 aa9.42□□□□□ -0.9
LDB7YBL006C RIM15P43565 1770 aa9.42□□□□□ -0.9
LDB7YBL006C SSA2P10592 639 aaKnown RBP9.41□□□□□ -0.9
LDB7YBL006C ISW2Q08773 1120 aa9.41□□□□□ -0.9
LDB7YBL006C ENP1P38333 483 aaKnown RBP9.4□□□□□ -0.9
LDB7YBL006C ALD2P47771 506 aa9.4□□□□□ -0.9
LDB7YBL006C ORC1P54784 914 aaPredicted RBP9.4□□□□□ -0.9
LDB7YBL006C SIR4P11978 1358 aa9.39□□□□□ -0.91
LDB7YBL006C DPS1P04802 557 aaKnown RBP9.35□□□□□ -0.91
LDB7YBL006C SSA1P10591 642 aaKnown RBP9.35□□□□□ -0.91
LDB7YBL006C FKH1P40466 484 aa9.35□□□□□ -0.91
LDB7YBL006C FRK1Q03002 865 aaPredicted RBP9.35□□□□□ -0.91
LDB7YBL006C HAA1Q12753 694 aaKnown RBP9.35□□□□□ -0.91
LDB7YBL006C SCT1P32784 759 aa9.34□□□□□ -0.91
LDB7YBL006C AUS1Q08409 1394 aa9.34□□□□□ -0.91
LDB7YBL006C ADE16P54113 591 aaKnown RBP9.33□□□□□ -0.92
LDB7YBL006C GAS4Q08271 471 aa9.33□□□□□ -0.92
LDB7YBL006C PDI1P17967 522 aaKnown RBP9.32□□□□□ -0.92
LDB7YBL006C RCR1P38212 213 aa9.32□□□□□ -0.92
LDB7YBL006C RPG1P38249 964 aaKnown RBP9.32□□□□□ -0.92
LDB7YBL006C YCK3P39962 524 aa9.32□□□□□ -0.92
LDB7YBL006C MEC3Q02574 474 aa9.31□□□□□ -0.92
LDB7YBL006C RPO41P13433 1351 aaKnown RBP9.3□□□□□ -0.92
LDB7YBL006C RTF1P53064 558 aa9.3□□□□□ -0.92
LDB7YBL006C SEC3P33332 1336 aaKnown RBP9.3□□□□□ -0.92
LDB7YBL006C SPT7P35177 1332 aa9.3□□□□□ -0.92
LDB7YBL006C BDF1P35817 686 aa9.29□□□□□ -0.92
LDB7YBL006C RTG3P38165 486 aa9.27□□□□□ -0.93
LDB7YBL006C TAP42Q04372 366 aa9.27□□□□□ -0.93
LDB7YBL006C GRX4P32642 244 aa9.25□□□□□ -0.93
LDB7YBL006C MSB4Q12317 492 aa9.25□□□□□ -0.93
LDB7YBL006C ALD3P54114 506 aa9.23□□□□□ -0.93
LDB7YBL006C HIM1Q06674 414 aa9.23□□□□□ -0.93
LDB7YBL006C INP54Q08227 384 aaKnown RBP9.23□□□□□ -0.93
LDB7YBL006C ATG13Q06628 738 aa9.22□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 100.5 ms