RNA–Protein interactions for RNA: YAL048C

GEM1, Transcript of Outer mitochondrial membrane GTPase, subunit of the ERMES complex, yeast

Gene GEM1, Length 1,989 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEM1	YAL048C	YDR344C	Q05510	147 aa		6.12	□□□□□ -1.43
GEM1	YAL048C	FKH1	P40466	484 aa		6.11	□□□□□ -1.43
GEM1	YAL048C	PDR1	P12383	1068 aa		6.11	□□□□□ -1.43
GEM1	YAL048C	BUD31	P25337	157 aa	Predicted RBP	6.11	□□□□□ -1.43
GEM1	YAL048C	NUD1	P32336	851 aa		6.11	□□□□□ -1.43
GEM1	YAL048C	SLY41	P22215	453 aa		6.1	□□□□□ -1.43
GEM1	YAL048C	KEX2	P13134	814 aa		6.09	□□□□□ -1.43
GEM1	YAL048C	ARG8	P18544	423 aa		6.09	□□□□□ -1.43
GEM1	YAL048C	YNL115C	P53925	644 aa		6.09	□□□□□ -1.43
GEM1	YAL048C	ERF2	Q06551	359 aa		6.09	□□□□□ -1.43
GEM1	YAL048C	ERG12	P07277	443 aa		6.09	□□□□□ -1.43
GEM1	YAL048C	RTF1	P53064	558 aa		6.09	□□□□□ -1.43
GEM1	YAL048C	TIF1	P10081	395 aa	Known RBP	6.08	□□□□□ -1.44
GEM1	YAL048C	RSC30	P38781	883 aa		6.08	□□□□□ -1.44
GEM1	YAL048C	HAP5	Q02516	242 aa		6.08	□□□□□ -1.44
GEM1	YAL048C	SAP30	P38429	201 aa		6.07	□□□□□ -1.44
GEM1	YAL048C	STR2	P47164	639 aa		6.07	□□□□□ -1.44
GEM1	YAL048C	ARH1	P48360	493 aa		6.07	□□□□□ -1.44
GEM1	YAL048C	CSE4	P36012	229 aa		6.06	□□□□□ -1.44
GEM1	YAL048C	RPL34B	P40525	121 aa	Known RBP	6.06	□□□□□ -1.44
GEM1	YAL048C	TRM1	P15565	570 aa	Known RBP	6.06	□□□□□ -1.44
GEM1	YAL048C	ISM1	P48526	1002 aa		6.06	□□□□□ -1.44
GEM1	YAL048C	YNL108C	P53929	270 aa		6.06	□□□□□ -1.44
GEM1	YAL048C	LAM6	Q08001	693 aa		6.05	□□□□□ -1.44
GEM1	YAL048C	AIR2	Q12476	344 aa	Known RBP	6.04	□□□□□ -1.44
GEM1	YAL048C	MAK16	P10962	306 aa	Predicted RBP	6.03	□□□□□ -1.44
GEM1	YAL048C	RAM1	P22007	431 aa		6.03	□□□□□ -1.44
GEM1	YAL048C	NPL4	P33755	580 aa		6.03	□□□□□ -1.44
GEM1	YAL048C	YPR204W	Q08995	1032 aa		6.03	□□□□□ -1.44
GEM1	YAL048C	TY1A-DR4	O74302	440 aa		6.02	□□□□□ -1.45
GEM1	YAL048C	TY1A-H	P0C2I4	478 aa	Known RBP	6.02	□□□□□ -1.45
GEM1	YAL048C	TY1A-A	P0CX57	440 aa		6.02	□□□□□ -1.45
GEM1	YAL048C	TY1A-PR1	P0CX58	440 aa		6.02	□□□□□ -1.45
GEM1	YAL048C	TY1A-OR	P0CX59	440 aa		6.02	□□□□□ -1.45
GEM1	YAL048C	TY1A-PR2	P0CX60	440 aa		6.02	□□□□□ -1.45
GEM1	YAL048C	TY1A-DR5	P0CX65	440 aa		6.02	□□□□□ -1.45
GEM1	YAL048C	TY1A-ER2	P0CX66	440 aa		6.02	□□□□□ -1.45
GEM1	YAL048C	TY1A-GR3	P0CX67	440 aa		6.02	□□□□□ -1.45
GEM1	YAL048C	TY1A-LR1	P0CX68	440 aa		6.02	□□□□□ -1.45
GEM1	YAL048C	TY1A-MR2	P0CX69	440 aa		6.02	□□□□□ -1.45
GEM1	YAL048C	RTG2	P32608	588 aa	Known RBP	6.02	□□□□□ -1.45
GEM1	YAL048C	TY1A-JR2	P47099	440 aa		6.02	□□□□□ -1.45
GEM1	YAL048C	TY1A-DR1	Q03856	440 aa		6.02	□□□□□ -1.45
GEM1	YAL048C	TY1A-ML1	Q04706	440 aa	Known RBP	6.02	□□□□□ -1.45
GEM1	YAL048C	SUB2	Q07478	446 aa	Known RBP	6.02	□□□□□ -1.45
GEM1	YAL048C	TY1A-BR	Q12217	440 aa		6.02	□□□□□ -1.45
GEM1	YAL048C	TY1A-NL2	Q12470	440 aa		6.02	□□□□□ -1.45
GEM1	YAL048C	TY1A-GR2	Q12485	440 aa		6.02	□□□□□ -1.45
GEM1	YAL048C	SUP45	P12385	437 aa	Known RBP	6.02	□□□□□ -1.45
GEM1	YAL048C	YDJ1	P25491	409 aa	Known RBP	6.02	□□□□□ -1.45
GEM1	YAL048C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	6.02	□□□□□ -1.45	not detected
GEM1	YAL048C	PUS6	P53294	404 aa		6.02	□□□□□ -1.45
GEM1	YAL048C	BNI4	P53858	892 aa		6.02	□□□□□ -1.45
GEM1	YAL048C	ENO2	P00925	437 aa	Known RBP	6	□□□□□ -1.45
GEM1	YAL048C	ELP4	Q02884	456 aa	Known RBP	6	□□□□□ -1.45
GEM1	YAL048C	AGE1	Q04412	482 aa		6	□□□□□ -1.45
GEM1	YAL048C	SEC2	P17065	759 aa		6	□□□□□ -1.45
GEM1	YAL048C	YPR015C	Q12531	247 aa		6	□□□□□ -1.45
GEM1	YAL048C	CPS1	P27614	576 aa		5.99	□□□□□ -1.45
GEM1	YAL048C	SPT5	P27692	1063 aa	Known RBP	5.99	□□□□□ -1.45
GEM1	YAL048C	BUD20	Q08004	166 aa	Predicted RBP	5.99	□□□□□ -1.45
GEM1	YAL048C	GCD11	P32481	527 aa	Known RBP	5.98	□□□□□ -1.45
GEM1	YAL048C	TTI1	P36097	1038 aa		5.98	□□□□□ -1.45
GEM1	YAL048C	TUB4	P53378	473 aa		5.98	□□□□□ -1.45
GEM1	YAL048C	TBF1	Q02457	562 aa		5.98	□□□□□ -1.45
GEM1	YAL048C	SPT23	P35210	1082 aa		5.98	□□□□□ -1.45
GEM1	YAL048C	ENO1	P00924	437 aa	Known RBP	5.97	□□□□□ -1.45
GEM1	YAL048C	SSA4	P22202	642 aa	Known RBP	5.97	□□□□□ -1.45
GEM1	YAL048C	YDL206W	Q12424	762 aa		5.97	□□□□□ -1.45
GEM1	YAL048C	SSA1	P10591	642 aa	Known RBP	5.97	□□□□□ -1.45
GEM1	YAL048C	RIM21	P48565	533 aa		5.97	□□□□□ -1.45
GEM1	YAL048C	DNA2	P38859	1522 aa		5.96	□□□□□ -1.46
GEM1	YAL048C	PTC2	P39966	464 aa	Known RBP	5.96	□□□□□ -1.46
GEM1	YAL048C	MRX10	Q05648	414 aa		5.96	□□□□□ -1.46
GEM1	YAL048C	PAC1	P39946	494 aa	Known RBP	5.95	□□□□□ -1.46
GEM1	YAL048C	NAF1	P53919	492 aa	Known RBP	5.95	□□□□□ -1.46
GEM1	YAL048C	GEF1	P37020	779 aa		5.93	□□□□□ -1.46
GEM1	YAL048C	PRE3	P38624	215 aa		5.93	□□□□□ -1.46
GEM1	YAL048C	MCM16	Q12262	181 aa		5.93	□□□□□ -1.46
GEM1	YAL048C	BMT6	Q12291	365 aa		5.93	□□□□□ -1.46
GEM1	YAL048C	RPA14	P50106	137 aa		5.93	□□□□□ -1.46
GEM1	YAL048C	KOG1	P38873	1557 aa		5.92	□□□□□ -1.46
GEM1	YAL048C	PRT1	P06103	763 aa	Known RBP	5.92	□□□□□ -1.46
GEM1	YAL048C	RRN7	P40992	514 aa		5.92	□□□□□ -1.46
GEM1	YAL048C	YML082W	Q04533	649 aa	Known RBP	5.92	□□□□□ -1.46
GEM1	YAL048C	NOB1	Q08444	459 aa	Known RBP	5.92	□□□□□ -1.46
GEM1	YAL048C	YPR097W	Q06839	1073 aa		5.91	□□□□□ -1.46
GEM1	YAL048C	PDC1	P06169	563 aa	Known RBP	5.9	□□□□□ -1.46
GEM1	YAL048C	RDS2	P19541	446 aa	Known RBP	5.9	□□□□□ -1.46
GEM1	YAL048C	ISF1	P32488	338 aa		5.9	□□□□□ -1.46
GEM1	YAL048C	SIS1	P25294	352 aa	Known RBP	5.89	□□□□□ -1.47
GEM1	YAL048C	YPP1	P46951	817 aa		5.89	□□□□□ -1.47
GEM1	YAL048C	ALR1	Q08269	859 aa		5.89	□□□□□ -1.47
GEM1	YAL048C	PUP1	P25043	261 aa		5.89	□□□□□ -1.47
GEM1	YAL048C	YJL171C	P46992	396 aa		5.89	□□□□□ -1.47
GEM1	YAL048C	YML083C	Q04526	418 aa		5.89	□□□□□ -1.47
GEM1	YAL048C	SWR1	Q05471	1514 aa		5.88	□□□□□ -1.47
GEM1	YAL048C	PEP12	P32854	288 aa		5.88	□□□□□ -1.47
GEM1	YAL048C	SIS2	P36024	562 aa		5.88	□□□□□ -1.47
GEM1	YAL048C	FIG4	P42837	879 aa		5.88	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms