RNA–Protein interactions for RNA: YAL018C

LDS1, Transcript of Protein Involved in spore wall assembly, yeastyeast

Gene LDS1, Length 978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDS1YAL018C ARO1P08566 1588 aaKnown RBP8.74□□□□□ -1.01
LDS1YAL018C BNI1P41832 1953 aa8.73□□□□□ -1.01
LDS1YAL018C TIF11P38912 153 aaKnown RBP8.73□□□□□ -1.01
LDS1YAL018C YBT1P32386 1661 aa8.71□□□□□ -1.02
LDS1YAL018C VPS29P38759 282 aa8.7□□□□□ -1.02
LDS1YAL018C URN1Q06525 465 aaKnown RBP8.69□□□□□ -1.02
LDS1YAL018C ABP1P15891 592 aaKnown RBP8.66□□□□□ -1.02
LDS1YAL018C AIR2Q12476 344 aaKnown RBP8.66□□□□□ -1.02
LDS1YAL018C YJL171CP46992 396 aa8.65□□□□□ -1.02
LDS1YAL018C RTG3P38165 486 aa8.64□□□□□ -1.03
LDS1YAL018C RCR1P38212 213 aa8.64□□□□□ -1.03
LDS1YAL018C DOP1Q03921 1698 aa8.64□□□□□ -1.03
LDS1YAL018C FKH1P40466 484 aa8.63□□□□□ -1.03
LDS1YAL018C YMR1P47147 688 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
LDS1YAL018C ULI1P43604 169 aa8.62□□□□□ -1.03
LDS1YAL018C STS1P38637 319 aa8.61□□□□□ -1.03
LDS1YAL018C YAP3P38749 330 aa8.61□□□□□ -1.03
LDS1YAL018C LDB19Q12502 818 aa8.61□□□□□ -1.03
LDS1YAL018C SEC7P11075 2009 aaKnown RBP8.6□□□□□ -1.03
LDS1YAL018C DBP1P24784 617 aaKnown RBP8.6□□□□□ -1.03
LDS1YAL018C YFR006WP43590 535 aa8.6□□□□□ -1.03
LDS1YAL018C PAF1P38351 445 aa8.57□□□□□ -1.04
LDS1YAL018C IOC2Q12072 812 aa8.57□□□□□ -1.04
LDS1YAL018C IPL1P38991 367 aa8.55□□□□□ -1.04
LDS1YAL018C MIF2P35201 549 aa8.54□□□□□ -1.04
LDS1YAL018C VMA1P17255 1071 aaKnown RBP8.53□□□□□ -1.04
LDS1YAL018C YOL036WQ08206 761 aa8.53□□□□□ -1.04
LDS1YAL018C CHC1P22137 1653 aaKnown RBP8.53□□□□□ -1.04
LDS1YAL018C DNF2Q12675 1612 aa8.52□□□□□ -1.05
LDS1YAL018C MSB4Q12317 492 aa8.52□□□□□ -1.05
LDS1YAL018C NOP7P53261 605 aaKnown RBP8.51□□□□□ -1.05
LDS1YAL018C SET4P42948 560 aa8.5□□□□□ -1.05
LDS1YAL018C EAP1P36041 632 aaKnown RBP8.49□□□□□ -1.05
LDS1YAL018C BMT6Q12291 365 aa8.49□□□□□ -1.05
LDS1YAL018C SAM3Q08986 587 aa8.48□□□□□ -1.05
LDS1YAL018C TYS1P36421 394 aaKnown RBP8.46□□□□□ -1.06
LDS1YAL018C GCN2P15442 1659 aa8.46□□□□□ -1.06
LDS1YAL018C RAV1P47104 1357 aa8.45□□□□□ -1.06
LDS1YAL018C TRP5P00931 707 aaKnown RBP8.44□□□□□ -1.06
LDS1YAL018C MAK10Q02197 733 aa8.44□□□□□ -1.06
LDS1YAL018C HAP1P0CE41 1502 aa8.44□□□□□ -1.06
LDS1YAL018C PDR5P33302 1511 aaKnown RBP8.44□□□□□ -1.06
LDS1YAL018C YOR093CQ12275 1648 aa8.43□□□□□ -1.06
LDS1YAL018C RTC1Q08281 1341 aa8.43□□□□□ -1.06
LDS1YAL018C RTG1P32607 177 aa8.42□□□□□ -1.06
LDS1YAL018C NUP188P52593 1655 aaKnown RBP8.41□□□□□ -1.06
LDS1YAL018C IML1P47170 1584 aa8.41□□□□□ -1.06
LDS1YAL018C PDR11P40550 1411 aa8.39□□□□□ -1.07
LDS1YAL018C NCR1Q12200 1170 aa8.39□□□□□ -1.07
LDS1YAL018C VMR1P38735 1592 aa8.37□□□□□ -1.07
LDS1YAL018C RAM2P29703 316 aa8.37□□□□□ -1.07
LDS1YAL018C ESL2P36168 1195 aa8.36□□□□□ -1.07
LDS1YAL018C SCT1P32784 759 aa8.35□□□□□ -1.07
LDS1YAL018C YNL035CP53962 389 aaKnown RBP8.35□□□□□ -1.07
LDS1YAL018C NAP1P25293 417 aaKnown RBP8.33□□□□□ -1.08
LDS1YAL018C SEC61P32915 480 aa8.33□□□□□ -1.08
LDS1YAL018C GYP5Q12344 894 aa8.33□□□□□ -1.08
LDS1YAL018C DNF3Q12674 1656 aa8.33□□□□□ -1.08
LDS1YAL018C ALD4P46367 519 aaKnown RBP8.32□□□□□ -1.08
LDS1YAL018C MRX12P47084 519 aa8.32□□□□□ -1.08
LDS1YAL018C YMR196WQ04336 1088 aa8.32□□□□□ -1.08
LDS1YAL018C MAK11P20484 414 aaKnown RBP8.31□□□□□ -1.08
LDS1YAL018C TAF5P38129 798 aa8.28□□□□□ -1.08
LDS1YAL018C POL5P39985 1022 aaKnown RBP8.28□□□□□ -1.08
LDS1YAL018C DAN4P47179 1161 aa8.28□□□□□ -1.08
LDS1YAL018C EDS1P38073 919 aa8.27□□□□□ -1.09
LDS1YAL018C TFG1P41895 735 aaPredicted RBP8.27□□□□□ -1.09
LDS1YAL018C DCW1P36091 449 aa8.26□□□□□ -1.09
LDS1YAL018C HTA1P04911 132 aaKnown RBP8.25□□□□□ -1.09
LDS1YAL018C HTA2P04912 132 aa8.25□□□□□ -1.09
LDS1YAL018C CAB1Q04430 367 aa8.25□□□□□ -1.09
LDS1YAL018C RAD9P14737 1309 aa8.25□□□□□ -1.09
LDS1YAL018C BCK1Q01389 1478 aa8.25□□□□□ -1.09
LDS1YAL018C CFT1Q06632 1357 aaKnown RBP8.24□□□□□ -1.09
LDS1YAL018C RIA1P53893 1110 aa8.24□□□□□ -1.09
LDS1YAL018C KRE5P22023 1365 aa8.23□□□□□ -1.09
LDS1YAL018C TAF8Q03750 510 aa8.23□□□□□ -1.09
LDS1YAL018C KIP3P53086 805 aaKnown RBP8.22□□□□□ -1.09
LDS1YAL018C JIP4Q03361 876 aa8.22□□□□□ -1.09
LDS1YAL018C SPE2P21182 396 aa8.2□□□□□ -1.1
LDS1YAL018C PTC3P34221 468 aaKnown RBP8.2□□□□□ -1.1
LDS1YAL018C SAP30P38429 201 aa8.2□□□□□ -1.1
LDS1YAL018C YEL023CP39992 682 aa8.2□□□□□ -1.1
LDS1YAL018C YNR029CP53729 429 aaKnown RBP8.2□□□□□ -1.1
LDS1YAL018C GRE2Q12068 342 aaKnown RBP8.2□□□□□ -1.1
LDS1YAL018C TY3B-IQ7LHG5 1498 aaKnown RBP8.19□□□□□ -1.1
LDS1YAL018C COQ8P27697 501 aa8.19□□□□□ -1.1
LDS1YAL018C THI12P42883 340 aa8.18□□□□□ -1.1
LDS1YAL018C THI5P43534 340 aa8.18□□□□□ -1.1
LDS1YAL018C THI11P47183 340 aa8.18□□□□□ -1.1
LDS1YAL018C THI13Q07748 340 aa8.18□□□□□ -1.1
LDS1YAL018C PTC4P38089 393 aa8.16□□□□□ -1.1
LDS1YAL018C ORC1P54784 914 aaPredicted RBP8.16□□□□□ -1.1
LDS1YAL018C TY1B-NL2Q99337 1749 aaKnown RBP8.16□□□□□ -1.1
LDS1YAL018C YDL129WQ07555 291 aa8.15□□□□□ -1.1
LDS1YAL018C YLR419WQ06698 1435 aaKnown RBP8.14□□□□□ -1.11
LDS1YAL018C NST1P53935 1240 aa8.14□□□□□ -1.11
LDS1YAL018C NUP192P47054 1683 aa8.14□□□□□ -1.11
LDS1YAL018C GUT1P32190 709 aa8.13□□□□□ -1.11
LDS1YAL018C CHZ1P40019 153 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 56.4 ms