RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 MYOM3Q5VTT5 1437 aa19.76■□□□□ 0.75
PHGDH-218ENST00000641491 TTC37Q6PGP7 1564 aa19.75■□□□□ 0.75
PHGDH-218ENST00000641491 EFCAB2Q5VUJ9 269 aa19.75■□□□□ 0.75
PHGDH-218ENST00000641491 ABCA9Q8IUA7 1624 aa19.75■□□□□ 0.75
PHGDH-218ENST00000641491 FBXO41Q8TF61 875 aa19.74■□□□□ 0.75
PHGDH-218ENST00000641491 MAP3K4Q9Y6R4 1608 aa19.73■□□□□ 0.75
PHGDH-218ENST00000641491 PHLDB1Q86UU1 1377 aa19.72■□□□□ 0.75
PHGDH-218ENST00000641491 FAM50AQ14320 339 aaKnown RBP19.72■□□□□ 0.75
PHGDH-218ENST00000641491 MYO5CQ9NQX4 1742 aa19.72■□□□□ 0.75
PHGDH-218ENST00000641491 PLCH2O75038 1416 aa19.71■□□□□ 0.75
PHGDH-218ENST00000641491 GPATCH8Q9UKJ3 1502 aaKnown RBP19.71■□□□□ 0.75
PHGDH-218ENST00000641491 MIA2Q96PC5 1412 aa19.7■□□□□ 0.74
PHGDH-218ENST00000641491 CFAP74Q9C0B2 1584 aa19.7■□□□□ 0.74
PHGDH-218ENST00000641491 FGD6Q6ZV73 1430 aa19.68■□□□□ 0.74
PHGDH-218ENST00000641491 FANCAO15360 1455 aa19.68■□□□□ 0.74
PHGDH-218ENST00000641491 PREX2Q70Z35 1606 aa19.68■□□□□ 0.74
PHGDH-218ENST00000641491 ARAP3Q8WWN8 1544 aa19.67■□□□□ 0.74
PHGDH-218ENST00000641491 PLEKHH2Q8IVE3 1493 aa19.67■□□□□ 0.74
PHGDH-218ENST00000641491 CDC42BPAQ5VT25 1732 aa19.63■□□□□ 0.73
PHGDH-218ENST00000641491 NEO1Q92859 1461 aa19.63■□□□□ 0.73
PHGDH-218ENST00000641491 MYT1LQ9UL68 1186 aa19.62■□□□□ 0.73
PHGDH-218ENST00000641491 CAMSAP2Q08AD1 1489 aa19.61■□□□□ 0.73
PHGDH-218ENST00000641491 PTPN23Q9H3S7 1636 aa19.61■□□□□ 0.73
PHGDH-218ENST00000641491 AKNAQ7Z591 1439 aa19.6■□□□□ 0.73
PHGDH-218ENST00000641491 ITGAEP38570 1179 aa19.59■□□□□ 0.73
PHGDH-218ENST00000641491 RRBP1Q9P2E9 1410 aaKnown RBP19.59■□□□□ 0.73
PHGDH-218ENST00000641491 TRIM26Q12899 539 aaPredicted RBP19.58■□□□□ 0.72
PHGDH-218ENST00000641491 RSPH4AQ5TD94 716 aa19.58■□□□□ 0.72
PHGDH-218ENST00000641491 TSPY4P0CV99 314 aa19.57■□□□□ 0.72
PHGDH-218ENST00000641491 TSPY10P0CW01 314 aa19.57■□□□□ 0.72
PHGDH-218ENST00000641491 CDC42BPBQ9Y5S2 1711 aa19.56■□□□□ 0.72
PHGDH-218ENST00000641491 SCAPERQ9BY12 1400 aa19.56■□□□□ 0.72
PHGDH-218ENST00000641491 TCOF1Q13428 1488 aaKnown RBP19.55■□□□□ 0.72
PHGDH-218ENST00000641491 KIAA1107Q9UPP5 1409 aa19.55■□□□□ 0.72
PHGDH-218ENST00000641491 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.55■□□□□ 0.72
PHGDH-218ENST00000641491 ZNF644Q9H582 1327 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-218ENST00000641491 HNRNPMP52272 730 aaKnown RBP eCLIP19.54■□□□□ 0.721e-6■■■■□ 22.8
PHGDH-218ENST00000641491 SYCP2Q9BX26 1530 aa19.54■□□□□ 0.72
PHGDH-218ENST00000641491 SAMD9LQ8IVG5 1584 aa19.53■□□□□ 0.72
PHGDH-218ENST00000641491 ABCC1P33527 1531 aa19.53■□□□□ 0.72
PHGDH-218ENST00000641491 DENND4BO75064 1496 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-218ENST00000641491 CCDC141Q6ZP82 1450 aa19.52■□□□□ 0.72
PHGDH-218ENST00000641491 ZNF518AQ6AHZ1 1483 aa19.5■□□□□ 0.71
PHGDH-218ENST00000641491 SPAG9O60271 1321 aaKnown RBP19.49■□□□□ 0.71
PHGDH-218ENST00000641491 DAPK1P53355 1430 aa19.47■□□□□ 0.71
PHGDH-218ENST00000641491 POGZQ7Z3K3 1410 aa19.47■□□□□ 0.71
PHGDH-218ENST00000641491 ARHGEF5Q12774 1597 aa19.46■□□□□ 0.71
PHGDH-218ENST00000641491 PTPRMP28827 1452 aa19.44■□□□□ 0.7
PHGDH-218ENST00000641491 CHIC2Q9UKJ5 165 aa19.44■□□□□ 0.7
PHGDH-218ENST00000641491 DNMT1P26358 1616 aaKnown RBP19.43■□□□□ 0.7
PHGDH-218ENST00000641491 C9orf84Q5VXU9 1444 aa19.43■□□□□ 0.7
PHGDH-218ENST00000641491 RAPGEF3O95398 923 aa19.43■□□□□ 0.7
PHGDH-218ENST00000641491 AFAP1Q8N556 730 aa19.43■□□□□ 0.7
PHGDH-218ENST00000641491 ANKRD30AQ9BXX3 1397 aa19.43■□□□□ 0.7
PHGDH-218ENST00000641491 TRAPPC8Q9Y2L5 1435 aa19.42■□□□□ 0.7
PHGDH-218ENST00000641491 SHANK2Q9UPX8 1470 aa19.42■□□□□ 0.7
PHGDH-218ENST00000641491 ABCC5O15440 1437 aa19.42■□□□□ 0.7
PHGDH-218ENST00000641491 MBD5Q9P267 1494 aa19.41■□□□□ 0.7
PHGDH-218ENST00000641491 ARHGEF12Q9NZN5 1544 aa19.4■□□□□ 0.7
PHGDH-218ENST00000641491 PCGF6Q9BYE7 350 aa19.39■□□□□ 0.69
PHGDH-218ENST00000641491 ADAMTSL3P82987 1691 aa19.38■□□□□ 0.69
PHGDH-218ENST00000641491 RTEL1-TNFRSF6BF6WH68 1400 aa19.36■□□□□ 0.69
PHGDH-218ENST00000641491 MAGI2Q86UL8 1455 aa19.35■□□□□ 0.69
PHGDH-218ENST00000641491 CROCC2H7BZ55 1655 aa19.35■□□□□ 0.69
PHGDH-218ENST00000641491 ATP7AQ04656 1500 aa19.35■□□□□ 0.69
PHGDH-218ENST00000641491 ROCK1Q13464 1354 aa19.34■□□□□ 0.69
PHGDH-218ENST00000641491 RRP7BPQ9NSQ0 103 aa19.34■□□□□ 0.69
PHGDH-218ENST00000641491 KIF15Q9NS87 1388 aa19.33■□□□□ 0.69
PHGDH-218ENST00000641491 KDM5CP41229 1560 aa19.33■□□□□ 0.69
PHGDH-218ENST00000641491 ZFYVE16Q7Z3T8 1539 aa19.33■□□□□ 0.68
PHGDH-218ENST00000641491 MLH3Q9UHC1 1453 aa19.33■□□□□ 0.68
PHGDH-218ENST00000641491 MAST1Q9Y2H9 1570 aa19.32■□□□□ 0.68
PHGDH-218ENST00000641491 LMTK3Q96Q04 1460 aa19.32■□□□□ 0.68
PHGDH-218ENST00000641491 ADGBQ8N7X0 1667 aa19.32■□□□□ 0.68
PHGDH-218ENST00000641491 RICTORQ6R327 1708 aa19.31■□□□□ 0.68
PHGDH-218ENST00000641491 ZMYM4Q5VZL5 1548 aa19.31■□□□□ 0.68
PHGDH-218ENST00000641491 ADGRL2O95490 1459 aa19.29■□□□□ 0.68
PHGDH-218ENST00000641491 ARID4BQ4LE39 1312 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-218ENST00000641491 FRMPD1Q5SYB0 1578 aa19.28■□□□□ 0.68
PHGDH-218ENST00000641491 INO80Q9ULG1 1556 aaPredicted RBP19.28■□□□□ 0.68
PHGDH-218ENST00000641491 PLXNC1O60486 1568 aa19.27■□□□□ 0.68
PHGDH-218ENST00000641491 PTPRKQ15262 1439 aa19.27■□□□□ 0.68
PHGDH-218ENST00000641491 NCOA1Q15788 1441 aa19.27■□□□□ 0.68
PHGDH-218ENST00000641491 ACIN1Q9UKV3 1341 aaKnown RBP19.26■□□□□ 0.67
PHGDH-218ENST00000641491 BCORL1Q5H9F3 1711 aa19.26■□□□□ 0.67
PHGDH-218ENST00000641491 HFM1A2PYH4 1435 aa19.25■□□□□ 0.67
PHGDH-218ENST00000641491 DUOX2Q9NRD8 1548 aa19.25■□□□□ 0.67
PHGDH-218ENST00000641491 ARHGEF40Q8TER5 1519 aa19.25■□□□□ 0.67
PHGDH-218ENST00000641491 A2MP01023 1474 aa19.24■□□□□ 0.67
PHGDH-218ENST00000641491 CERKQ8TCT0 537 aa19.24■□□□□ 0.67
PHGDH-218ENST00000641491 SETD5Q9C0A6 1442 aa19.24■□□□□ 0.67
PHGDH-218ENST00000641491 ANKRD50Q9ULJ7 1429 aa19.24■□□□□ 0.67
PHGDH-218ENST00000641491 ATP10AO60312 1499 aa19.23■□□□□ 0.67
PHGDH-218ENST00000641491 MADDQ8WXG6 1647 aa19.23■□□□□ 0.67
PHGDH-218ENST00000641491 ERBINQ96RT1 1412 aa19.23■□□□□ 0.67
PHGDH-218ENST00000641491 YEATS2Q9ULM3 1422 aa19.23■□□□□ 0.67
PHGDH-218ENST00000641491 HSPA2P54652 639 aa19.22■□□□□ 0.67
PHGDH-218ENST00000641491 DHX29Q7Z478 1369 aaKnown RBP19.21■□□□□ 0.67
PHGDH-218ENST00000641491 KIDINS220Q9ULH0 1771 aa19.21■□□□□ 0.67
PHGDH-218ENST00000641491 DIP2CQ9Y2E4 1556 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms