RNA–Protein interactions for RNA: ENST00000641458.1

RGPD1-206, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 BASIC

Gene RGPD1, Length 5,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-206ENST00000641458 INO80Q9ULG1 1556 aaPredicted RBP9.78□□□□□ -0.84
RGPD1-206ENST00000641458 PLCH2O75038 1416 aa9.77□□□□□ -0.85
RGPD1-206ENST00000641458 NEO1Q92859 1461 aa9.77□□□□□ -0.85
RGPD1-206ENST00000641458 HRCP23327 699 aa9.77□□□□□ -0.85
RGPD1-206ENST00000641458 MBD5Q9P267 1494 aa9.77□□□□□ -0.85
RGPD1-206ENST00000641458 RICTORQ6R327 1708 aa9.76□□□□□ -0.85
RGPD1-206ENST00000641458 ROCK1Q13464 1354 aa9.76□□□□□ -0.85
RGPD1-206ENST00000641458 ACIN1Q9UKV3 1341 aaKnown RBP9.76□□□□□ -0.85
RGPD1-206ENST00000641458 EIF2AK4Q9P2K8 1649 aaKnown RBP9.76□□□□□ -0.85
RGPD1-206ENST00000641458 FAM135AQ9P2D6 1515 aa9.76□□□□□ -0.85
RGPD1-206ENST00000641458 DEPDC5O75140 1603 aa9.75□□□□□ -0.85
RGPD1-206ENST00000641458 KDM5DQ9BY66 1539 aa9.75□□□□□ -0.85
RGPD1-206ENST00000641458 ASXL2Q76L83 1435 aa9.74□□□□□ -0.85
RGPD1-206ENST00000641458 MAGI2Q86UL8 1455 aa9.73□□□□□ -0.85
RGPD1-206ENST00000641458 RTEL1-TNFRSF6BF6WH68 1400 aa9.73□□□□□ -0.85
RGPD1-206ENST00000641458 CDK11AQ9UQ88 783 aaPredicted RBP9.72□□□□□ -0.85
RGPD1-206ENST00000641458 KANK4Q5T7N3 995 aaPredicted RBP9.71□□□□□ -0.85
RGPD1-206ENST00000641458 CCNB3Q8WWL7 1395 aa9.71□□□□□ -0.85
RGPD1-206ENST00000641458 UNC13BO14795 1591 aa9.71□□□□□ -0.86
RGPD1-206ENST00000641458 FRMPD1Q5SYB0 1578 aa9.71□□□□□ -0.86
RGPD1-206ENST00000641458 CAMSAP2Q08AD1 1489 aa9.71□□□□□ -0.86
RGPD1-206ENST00000641458 VWDEQ8N2E2 1590 aa9.7□□□□□ -0.86
RGPD1-206ENST00000641458 RNF17Q9BXT8 1623 aaKnown RBP9.69□□□□□ -0.86
RGPD1-206ENST00000641458 MTUS2Q5JR59 1369 aa9.69□□□□□ -0.86
RGPD1-206ENST00000641458 HFM1A2PYH4 1435 aa9.69□□□□□ -0.86
RGPD1-206ENST00000641458 FBLN2P98095 1184 aa9.69□□□□□ -0.86
RGPD1-206ENST00000641458 NEURL4Q96JN8 1562 aa9.68□□□□□ -0.86
RGPD1-206ENST00000641458 KIDINS220Q9ULH0 1771 aa9.68□□□□□ -0.86
RGPD1-206ENST00000641458 MLH3Q9UHC1 1453 aa9.68□□□□□ -0.86
RGPD1-206ENST00000641458 RSPH4AQ5TD94 716 aa9.67□□□□□ -0.86
RGPD1-206ENST00000641458 ZFYVE16Q7Z3T8 1539 aa9.67□□□□□ -0.86
RGPD1-206ENST00000641458 TRIM26Q12899 539 aaPredicted RBP9.67□□□□□ -0.86
RGPD1-206ENST00000641458 DAPK1P53355 1430 aa9.66□□□□□ -0.86
RGPD1-206ENST00000641458 CCDC141Q6ZP82 1450 aa9.66□□□□□ -0.86
RGPD1-206ENST00000641458 ARHGEF12Q9NZN5 1544 aa9.66□□□□□ -0.86
RGPD1-206ENST00000641458 ABCC5O15440 1437 aa9.65□□□□□ -0.86
RGPD1-206ENST00000641458 TEX14Q8IWB6 1497 aa9.64□□□□□ -0.87
RGPD1-206ENST00000641458 DNAJC5Q9H3Z4 198 aa9.64□□□□□ -0.87
RGPD1-206ENST00000641458 AGLP35573 1532 aa9.64□□□□□ -0.87
RGPD1-206ENST00000641458 ZC3H13Q5T200 1668 aaKnown RBP9.64□□□□□ -0.87
RGPD1-206ENST00000641458 IQGAP3Q86VI3 1631 aa9.63□□□□□ -0.87
RGPD1-206ENST00000641458 HECW2Q9P2P5 1572 aa9.63□□□□□ -0.87
RGPD1-206ENST00000641458 LMTK2Q8IWU2 1503 aa9.63□□□□□ -0.87
RGPD1-206ENST00000641458 PTPRKQ15262 1439 aa9.63□□□□□ -0.87
RGPD1-206ENST00000641458 PLEKHD1A6NEE1 506 aa9.63□□□□□ -0.87
RGPD1-206ENST00000641458 MROH1Q8NDA8 1641 aa9.62□□□□□ -0.87
RGPD1-206ENST00000641458 PRDM15P57071 1507 aaPredicted RBP9.61□□□□□ -0.87
RGPD1-206ENST00000641458 DUOX2Q9NRD8 1548 aa9.61□□□□□ -0.87
RGPD1-206ENST00000641458 SYCP2Q9BX26 1530 aa9.61□□□□□ -0.87
RGPD1-206ENST00000641458 NAIPQ13075 1403 aa9.61□□□□□ -0.87
RGPD1-206ENST00000641458 POGZQ7Z3K3 1410 aa9.61□□□□□ -0.87
RGPD1-206ENST00000641458 NCOA1Q15788 1441 aa9.61□□□□□ -0.87
RGPD1-206ENST00000641458 ZNF518AQ6AHZ1 1483 aa9.6□□□□□ -0.87
RGPD1-206ENST00000641458 ERBINQ96RT1 1412 aa9.6□□□□□ -0.87
RGPD1-206ENST00000641458 FANCAO15360 1455 aa9.6□□□□□ -0.87
RGPD1-206ENST00000641458 CLSPNQ9HAW4 1339 aa9.6□□□□□ -0.87
RGPD1-206ENST00000641458 ATP10AO60312 1499 aa9.59□□□□□ -0.87
RGPD1-206ENST00000641458 P3H3Q8IVL6 736 aa9.59□□□□□ -0.87
RGPD1-206ENST00000641458 ARHGAP5Q13017 1502 aa9.59□□□□□ -0.87
RGPD1-206ENST00000641458 ATP7AQ04656 1500 aa9.59□□□□□ -0.87
RGPD1-206ENST00000641458 DIP2CQ9Y2E4 1556 aa9.59□□□□□ -0.87
RGPD1-206ENST00000641458 ABCA6Q8N139 1617 aa9.58□□□□□ -0.88
RGPD1-206ENST00000641458 ARHGEF40Q8TER5 1519 aa9.58□□□□□ -0.88
RGPD1-206ENST00000641458 APLP2Q06481 763 aa9.57□□□□□ -0.88
RGPD1-206ENST00000641458 MROH2AA6NES4 1674 aa9.57□□□□□ -0.88
RGPD1-206ENST00000641458 KDM5AP29375 1690 aaKnown RBP9.57□□□□□ -0.88
RGPD1-206ENST00000641458 CD109Q6YHK3 1445 aa9.57□□□□□ -0.88
RGPD1-206ENST00000641458 TET3O43151 1660 aa9.55□□□□□ -0.88
RGPD1-206ENST00000641458 DENND4BO75064 1496 aaPredicted RBP9.55□□□□□ -0.88
RGPD1-206ENST00000641458 KDM6BO15054 1643 aa9.54□□□□□ -0.88
RGPD1-206ENST00000641458 C9orf84Q5VXU9 1444 aa9.54□□□□□ -0.88
RGPD1-206ENST00000641458 ADGRL1O94910 1474 aa9.54□□□□□ -0.88
RGPD1-206ENST00000641458 SETD5Q9C0A6 1442 aa9.54□□□□□ -0.88
RGPD1-206ENST00000641458 EFCAB2Q5VUJ9 269 aa9.51□□□□□ -0.89
RGPD1-206ENST00000641458 TRAPPC8Q9Y2L5 1435 aa9.51□□□□□ -0.89
RGPD1-206ENST00000641458 PIK3C2BO00750 1634 aa9.51□□□□□ -0.89
RGPD1-206ENST00000641458 SIGLEC1Q9BZZ2 1709 aa9.5□□□□□ -0.89
RGPD1-206ENST00000641458 ARHGAP31Q2M1Z3 1444 aa9.49□□□□□ -0.89
RGPD1-206ENST00000641458 PZPP20742 1482 aa9.49□□□□□ -0.89
RGPD1-206ENST00000641458 RPRD2Q5VT52 1461 aaKnown RBP9.49□□□□□ -0.89
RGPD1-206ENST00000641458 ANKRD30AQ9BXX3 1397 aa9.49□□□□□ -0.89
RGPD1-206ENST00000641458 IFT172Q9UG01 1749 aa9.48□□□□□ -0.89
RGPD1-206ENST00000641458 NPM1P06748 294 aaKnown RBP eCLIP9.47□□□□□ -0.89
RGPD1-206ENST00000641458 CEP152O94986 1710 aa9.47□□□□□ -0.89
RGPD1-206ENST00000641458 CFDP1Q9UEE9 299 aaPredicted RBP9.47□□□□□ -0.89
RGPD1-206ENST00000641458 EFCAB6Q5THR3 1501 aa9.47□□□□□ -0.89
RGPD1-206ENST00000641458 E9PCH4 1651 aa9.46□□□□□ -0.89
RGPD1-206ENST00000641458 DHX29Q7Z478 1369 aaKnown RBP9.46□□□□□ -0.89
RGPD1-206ENST00000641458 SPHKAPQ2M3C7 1700 aa9.46□□□□□ -0.89
RGPD1-206ENST00000641458 PTPRTO14522 1441 aa9.46□□□□□ -0.9
RGPD1-206ENST00000641458 SCAPERQ9BY12 1400 aa9.46□□□□□ -0.9
RGPD1-206ENST00000641458 COL17A1Q9UMD9 1497 aaPredicted RBP9.45□□□□□ -0.9
RGPD1-206ENST00000641458 CAMSAP1Q5T5Y3 1602 aa9.45□□□□□ -0.9
RGPD1-206ENST00000641458 A2MP01023 1474 aa9.44□□□□□ -0.9
RGPD1-206ENST00000641458 DHX57Q6P158 1386 aaKnown RBP9.44□□□□□ -0.9
RGPD1-206ENST00000641458 ANKRD50Q9ULJ7 1429 aa9.44□□□□□ -0.9
RGPD1-206ENST00000641458 TSPOAP1O95153 1857 aa9.44□□□□□ -0.9
RGPD1-206ENST00000641458 LAMC1P11047 1609 aa9.44□□□□□ -0.9
RGPD1-206ENST00000641458 RAB3GAP2Q9H2M9 1393 aa9.44□□□□□ -0.9
RGPD1-206ENST00000641458 TRPM2O94759 1503 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms