RNA–Protein interactions for RNA: ENST00000640827.1

STRADA-250, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 5

Gene STRADA, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-250ENST00000640827 ARHGAP5Q13017 1502 aa14□□□□□ -0.17
STRADA-250ENST00000640827 GPATCH8Q9UKJ3 1502 aaKnown RBP14□□□□□ -0.17
STRADA-250ENST00000640827 AKNAQ7Z591 1439 aa13.99□□□□□ -0.17
STRADA-250ENST00000640827 NCOA2Q15596 1464 aa13.98□□□□□ -0.17
STRADA-250ENST00000640827 APLP2Q06481 763 aa13.98□□□□□ -0.17
STRADA-250ENST00000640827 PHLDB1Q86UU1 1377 aa13.98□□□□□ -0.17
STRADA-250ENST00000640827 EFCAB2Q5VUJ9 269 aa13.97□□□□□ -0.17
STRADA-250ENST00000640827 CCNB3Q8WWL7 1395 aa13.96□□□□□ -0.17
STRADA-250ENST00000640827 FRMPD1Q5SYB0 1578 aa13.96□□□□□ -0.17
STRADA-250ENST00000640827 RAPGEF3O95398 923 aa13.96□□□□□ -0.18
STRADA-250ENST00000640827 RICTORQ6R327 1708 aa13.95□□□□□ -0.18
STRADA-250ENST00000640827 ADGRL1O94910 1474 aa13.95□□□□□ -0.18
STRADA-250ENST00000640827 SAMD9LQ8IVG5 1584 aa13.94□□□□□ -0.18
STRADA-250ENST00000640827 ITSN2Q9NZM3 1697 aa13.94□□□□□ -0.18
STRADA-250ENST00000640827 SCAPERQ9BY12 1400 aa13.94□□□□□ -0.18
STRADA-250ENST00000640827 DENND4BO75064 1496 aaPredicted RBP13.93□□□□□ -0.18
STRADA-250ENST00000640827 ZNF777Q9ULD5 760 aaPredicted RBP13.92□□□□□ -0.18
STRADA-250ENST00000640827 ARHGEF12Q9NZN5 1544 aa13.92□□□□□ -0.18
STRADA-250ENST00000640827 CFDP1Q9UEE9 299 aaPredicted RBP13.92□□□□□ -0.18
STRADA-250ENST00000640827 ABCC1P33527 1531 aa13.92□□□□□ -0.18
STRADA-250ENST00000640827 ZNF644Q9H582 1327 aaPredicted RBP13.9□□□□□ -0.18
STRADA-250ENST00000640827 POGZQ7Z3K3 1410 aa13.89□□□□□ -0.19
STRADA-250ENST00000640827 PPARGC1BQ86YN6 1023 aaKnown RBP13.89□□□□□ -0.19
STRADA-250ENST00000640827 TRAPPC8Q9Y2L5 1435 aa13.89□□□□□ -0.19
STRADA-250ENST00000640827 SYCP2Q9BX26 1530 aa13.88□□□□□ -0.19
STRADA-250ENST00000640827 AFAP1Q8N556 730 aa13.88□□□□□ -0.19
STRADA-250ENST00000640827 ZMYM4Q5VZL5 1548 aa13.87□□□□□ -0.19
STRADA-250ENST00000640827 HNRNPMP52272 730 aaKnown RBP eCLIP13.87□□□□□ -0.19
STRADA-250ENST00000640827 MYOM3Q5VTT5 1437 aa13.86□□□□□ -0.19
STRADA-250ENST00000640827 KDM5CP41229 1560 aa13.85□□□□□ -0.19
STRADA-250ENST00000640827 CAMSAP2Q08AD1 1489 aa13.85□□□□□ -0.19
STRADA-250ENST00000640827 ZNF518AQ6AHZ1 1483 aa13.85□□□□□ -0.19
STRADA-250ENST00000640827 YEATS2Q9ULM3 1422 aa13.84□□□□□ -0.19
STRADA-250ENST00000640827 KIAA1107Q9UPP5 1409 aa13.84□□□□□ -0.19
STRADA-250ENST00000640827 PLEKHH2Q8IVE3 1493 aa13.84□□□□□ -0.19
STRADA-250ENST00000640827 MBD5Q9P267 1494 aa13.83□□□□□ -0.19
STRADA-250ENST00000640827 ARHGEF40Q8TER5 1519 aa13.82□□□□□ -0.2
STRADA-250ENST00000640827 MIA2Q96PC5 1412 aa13.82□□□□□ -0.2
STRADA-250ENST00000640827 HECW2Q9P2P5 1572 aa13.81□□□□□ -0.2
STRADA-250ENST00000640827 ZFYVE16Q7Z3T8 1539 aa13.81□□□□□ -0.2
STRADA-250ENST00000640827 KIDINS220Q9ULH0 1771 aa13.81□□□□□ -0.2
STRADA-250ENST00000640827 PTPN23Q9H3S7 1636 aa13.81□□□□□ -0.2
STRADA-250ENST00000640827 MAGI2Q86UL8 1455 aa13.81□□□□□ -0.2
STRADA-250ENST00000640827 FGD6Q6ZV73 1430 aa13.8□□□□□ -0.2
STRADA-250ENST00000640827 SIGLEC1Q9BZZ2 1709 aa13.8□□□□□ -0.2
STRADA-250ENST00000640827 MLH3Q9UHC1 1453 aa13.79□□□□□ -0.2
STRADA-250ENST00000640827 ABCA6Q8N139 1617 aa13.78□□□□□ -0.2
STRADA-250ENST00000640827 MYT1LQ9UL68 1186 aa13.78□□□□□ -0.2
STRADA-250ENST00000640827 ARHGEF5Q12774 1597 aa13.78□□□□□ -0.2
STRADA-250ENST00000640827 DIP2CQ9Y2E4 1556 aa13.78□□□□□ -0.2
STRADA-250ENST00000640827 SPAG9O60271 1321 aaKnown RBP13.77□□□□□ -0.2
STRADA-250ENST00000640827 INO80Q9ULG1 1556 aaPredicted RBP13.77□□□□□ -0.21
STRADA-250ENST00000640827 TCOF1Q13428 1488 aaKnown RBP13.76□□□□□ -0.21
STRADA-250ENST00000640827 CCDC141Q6ZP82 1450 aa13.76□□□□□ -0.21
STRADA-250ENST00000640827 ATP7AQ04656 1500 aa13.76□□□□□ -0.21
STRADA-250ENST00000640827 ATP10AO60312 1499 aa13.75□□□□□ -0.21
STRADA-250ENST00000640827 KDM4FA0A1W2PPD8 638 aa13.74□□□□□ -0.21
STRADA-250ENST00000640827 C9orf84Q5VXU9 1444 aa13.73□□□□□ -0.21
STRADA-250ENST00000640827 RSPH4AQ5TD94 716 aa13.73□□□□□ -0.21
STRADA-250ENST00000640827 DNMT1P26358 1616 aaKnown RBP13.72□□□□□ -0.21
STRADA-250ENST00000640827 ABCC5O15440 1437 aa13.72□□□□□ -0.21
STRADA-250ENST00000640827 CROCC2H7BZ55 1655 aa13.72□□□□□ -0.21
STRADA-250ENST00000640827 FAM50AQ14320 339 aaKnown RBP13.71□□□□□ -0.21
STRADA-250ENST00000640827 RTEL1-TNFRSF6BF6WH68 1400 aa13.71□□□□□ -0.21
STRADA-250ENST00000640827 ADGBQ8N7X0 1667 aa13.71□□□□□ -0.21
STRADA-250ENST00000640827 ARID4BQ4LE39 1312 aaPredicted RBP13.71□□□□□ -0.21
STRADA-250ENST00000640827 BCORL1Q5H9F3 1711 aa13.71□□□□□ -0.22
STRADA-250ENST00000640827 DAPK1P53355 1430 aa13.7□□□□□ -0.22
STRADA-250ENST00000640827 REREQ9P2R6 1566 aa13.7□□□□□ -0.22
STRADA-250ENST00000640827 MAST1Q9Y2H9 1570 aa13.7□□□□□ -0.22
STRADA-250ENST00000640827 TSPY4P0CV99 314 aa13.7□□□□□ -0.22
STRADA-250ENST00000640827 TSPY10P0CW01 314 aa13.7□□□□□ -0.22
STRADA-250ENST00000640827 ADAMTSL3P82987 1691 aa13.68□□□□□ -0.22
STRADA-250ENST00000640827 PLXNC1O60486 1568 aa13.68□□□□□ -0.22
STRADA-250ENST00000640827 A2MP01023 1474 aa13.67□□□□□ -0.22
STRADA-250ENST00000640827 MLECQ14165 292 aa13.67□□□□□ -0.22
STRADA-250ENST00000640827 RRBP1Q9P2E9 1410 aaKnown RBP13.66□□□□□ -0.22
STRADA-250ENST00000640827 SHANK2Q9UPX8 1470 aa13.66□□□□□ -0.22
STRADA-250ENST00000640827 AGLP35573 1532 aa13.66□□□□□ -0.22
STRADA-250ENST00000640827 CHIC2Q9UKJ5 165 aa13.66□□□□□ -0.22
STRADA-250ENST00000640827 PTPRKQ15262 1439 aa13.65□□□□□ -0.22
STRADA-250ENST00000640827 MADDQ8WXG6 1647 aa13.65□□□□□ -0.22
STRADA-250ENST00000640827 DHX29Q7Z478 1369 aaKnown RBP13.63□□□□□ -0.23
STRADA-250ENST00000640827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.63□□□□□ -0.23
STRADA-250ENST00000640827 FER1L4A9Z1Z3 1794 aa13.62□□□□□ -0.23
STRADA-250ENST00000640827 RIMS1Q86UR5 1692 aaKnown RBP13.62□□□□□ -0.23
STRADA-250ENST00000640827 ITGAEP38570 1179 aa13.62□□□□□ -0.23
STRADA-250ENST00000640827 RRP7BPQ9NSQ0 103 aa13.62□□□□□ -0.23
STRADA-250ENST00000640827 ADGRL2O95490 1459 aa13.6□□□□□ -0.23
STRADA-250ENST00000640827 NCOA1Q15788 1441 aa13.6□□□□□ -0.23
STRADA-250ENST00000640827 KIF15Q9NS87 1388 aa13.6□□□□□ -0.23
STRADA-250ENST00000640827 DUOX2Q9NRD8 1548 aa13.59□□□□□ -0.23
STRADA-250ENST00000640827 ANKRD30AQ9BXX3 1397 aa13.59□□□□□ -0.23
STRADA-250ENST00000640827 KIF3BO15066 747 aa13.58□□□□□ -0.23
STRADA-250ENST00000640827 GGT6Q6P531 493 aa13.58□□□□□ -0.24
STRADA-250ENST00000640827 PTPRMP28827 1452 aa13.58□□□□□ -0.24
STRADA-250ENST00000640827 EIF2AK4Q9P2K8 1649 aaKnown RBP13.56□□□□□ -0.24
STRADA-250ENST00000640827 ILDR1Q86SU0 546 aaPredicted RBP13.56□□□□□ -0.24
STRADA-250ENST00000640827 CLTCQ00610 1675 aaKnown RBP13.55□□□□□ -0.24
STRADA-250ENST00000640827 RNF17Q9BXT8 1623 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms