RNA–Protein interactions for RNA: ENST00000640827.1

STRADA-250, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 5

Gene STRADA, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-250ENST00000640827 NISCHQ9Y2I1 1504 aa21.5■■□□□ 1.03
STRADA-250ENST00000640827 CCDC180Q9P1Z9 1646 aa19.05■□□□□ 0.64
STRADA-250ENST00000640827 ABCC9O60706 1549 aa18.57■□□□□ 0.56
STRADA-250ENST00000640827 ZCCHC6Q5VYS8 1495 aaKnown RBP17.93■□□□□ 0.46
STRADA-250ENST00000640827 DCAF8L2P0C7V8 631 aa17.92■□□□□ 0.46
STRADA-250ENST00000640827 NACADO15069 1562 aa17.87■□□□□ 0.45
STRADA-250ENST00000640827 RB1CC1Q8TDY2 1594 aa17.86■□□□□ 0.45
STRADA-250ENST00000640827 MYO15BQ96JP2 1530 aa17.78■□□□□ 0.44
STRADA-250ENST00000640827 DCAF1Q9Y4B6 1507 aa17.76■□□□□ 0.43
STRADA-250ENST00000640827 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
STRADA-250ENST00000640827 SCRIBQ14160 1630 aa17.43■□□□□ 0.38
STRADA-250ENST00000640827 BICRAQ9NZM4 1560 aa17.39■□□□□ 0.37
STRADA-250ENST00000640827 PABPN1Q86U42 306 aaKnown RBP eCLIP17.38■□□□□ 0.37
STRADA-250ENST00000640827 SHROOM4Q9ULL8 1493 aa17.1■□□□□ 0.33
STRADA-250ENST00000640827 DNAJC5BQ9UF47 199 aa16.99■□□□□ 0.31
STRADA-250ENST00000640827 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.29
STRADA-250ENST00000640827 CC2D2AQ9P2K1 1620 aa16.81■□□□□ 0.28
STRADA-250ENST00000640827 CECR2Q9BXF3 1484 aa16.77■□□□□ 0.28
STRADA-250ENST00000640827 SMARCA4P51532 1647 aa16.67■□□□□ 0.26
STRADA-250ENST00000640827 BAZ1AQ9NRL2 1556 aaPredicted RBP16.63■□□□□ 0.25
STRADA-250ENST00000640827 MROH2BQ7Z745 1585 aa16.6■□□□□ 0.25
STRADA-250ENST00000640827 ATAD2BQ9ULI0 1458 aa16.54■□□□□ 0.24
STRADA-250ENST00000640827 SMARCA2P51531 1590 aa16.49■□□□□ 0.23
STRADA-250ENST00000640827 NCAPD3P42695 1498 aa16.49■□□□□ 0.23
STRADA-250ENST00000640827 PEG3Q9GZU2 1588 aa16.48■□□□□ 0.23
STRADA-250ENST00000640827 WIZO95785 1651 aa16.44■□□□□ 0.22
STRADA-250ENST00000640827 RSF1Q96T23 1441 aaPredicted RBP16.43■□□□□ 0.22
STRADA-250ENST00000640827 HMGXB3Q12766 1538 aa16.42■□□□□ 0.22
STRADA-250ENST00000640827 BAZ1BQ9UIG0 1483 aaKnown RBP16.4■□□□□ 0.22
STRADA-250ENST00000640827 TOP2AP11388 1531 aaKnown RBP16.22■□□□□ 0.19
STRADA-250ENST00000640827 NESP48681 1621 aa16.12■□□□□ 0.17
STRADA-250ENST00000640827 SUPT5HO00267 1087 aaKnown RBP16.1■□□□□ 0.17
STRADA-250ENST00000640827 CCDC88BA6NC98 1476 aa16.05■□□□□ 0.16
STRADA-250ENST00000640827 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
STRADA-250ENST00000640827 CADPSQ9ULU8 1353 aa16.02■□□□□ 0.15
STRADA-250ENST00000640827 CFTRP13569 1480 aa15.95■□□□□ 0.14
STRADA-250ENST00000640827 ERCC6Q03468 1493 aa15.95■□□□□ 0.14
STRADA-250ENST00000640827 KIF21AQ7Z4S6 1674 aa15.94■□□□□ 0.14
STRADA-250ENST00000640827 PDS5BQ9NTI5 1447 aa15.91■□□□□ 0.14
STRADA-250ENST00000640827 PRDM2Q13029 1718 aa15.87■□□□□ 0.13
STRADA-250ENST00000640827 FANCD2Q9BXW9 1451 aa15.85■□□□□ 0.13
STRADA-250ENST00000640827 THOC2Q8NI27 1593 aaKnown RBP15.84■□□□□ 0.13
STRADA-250ENST00000640827 CEP164Q9UPV0 1460 aa15.81■□□□□ 0.12
STRADA-250ENST00000640827 DNAJC5Q9H3Z4 198 aa15.8■□□□□ 0.12
STRADA-250ENST00000640827 MRC2Q9UBG0 1479 aa15.77■□□□□ 0.11
STRADA-250ENST00000640827 CUX2O14529 1486 aa15.74■□□□□ 0.11
STRADA-250ENST00000640827 WDR62O43379 1518 aa15.72■□□□□ 0.11
STRADA-250ENST00000640827 URB2Q14146 1524 aaKnown RBP15.71■□□□□ 0.11
STRADA-250ENST00000640827 TOPBP1Q92547 1522 aa15.62■□□□□ 0.09
STRADA-250ENST00000640827 DNMBPQ6XZF7 1577 aa15.6■□□□□ 0.09
STRADA-250ENST00000640827 ABCC8Q09428 1581 aa15.57■□□□□ 0.08
STRADA-250ENST00000640827 CUX1P39880 1505 aa15.56■□□□□ 0.08
STRADA-250ENST00000640827 POLA1P09884 1462 aaPredicted RBP15.49■□□□□ 0.07
STRADA-250ENST00000640827 FGD5Q6ZNL6 1462 aa15.48■□□□□ 0.07
STRADA-250ENST00000640827 SYNJ1O43426 1573 aa15.47■□□□□ 0.07
STRADA-250ENST00000640827 IFT140Q96RY7 1462 aa15.46■□□□□ 0.07
STRADA-250ENST00000640827 WRNQ14191 1432 aaPredicted RBP eCLIP15.46■□□□□ 0.07
STRADA-250ENST00000640827 TARBP1Q13395 1621 aaKnown RBP15.45■□□□□ 0.06
STRADA-250ENST00000640827 RAD54L2Q9Y4B4 1467 aa15.45■□□□□ 0.06
STRADA-250ENST00000640827 BIVM-ERCC5R4GMW8 1640 aa15.44■□□□□ 0.06
STRADA-250ENST00000640827 ZNF608Q9ULD9 1512 aaPredicted RBP15.44■□□□□ 0.06
STRADA-250ENST00000640827 TOP2BQ02880 1626 aa15.43■□□□□ 0.06
STRADA-250ENST00000640827 SOGA1O94964 1423 aa15.42■□□□□ 0.06
STRADA-250ENST00000640827 EIF4G3O43432 1585 aaKnown RBP15.37■□□□□ 0.05
STRADA-250ENST00000640827 WDR97A6NE52 1622 aa15.36■□□□□ 0.05
STRADA-250ENST00000640827 AQRO60306 1485 aaKnown RBP eCLIP15.35■□□□□ 0.054e-7■■■■■ 28.2
STRADA-250ENST00000640827 TDRD9Q8NDG6 1382 aaKnown RBP15.34■□□□□ 0.05
STRADA-250ENST00000640827 ABCA10Q8WWZ4 1543 aa15.32■□□□□ 0.04
STRADA-250ENST00000640827 ABCA5Q8WWZ7 1642 aa15.26■□□□□ 0.03
STRADA-250ENST00000640827 GAPVD1Q14C86 1478 aa15.25■□□□□ 0.03
STRADA-250ENST00000640827 PBRM1Q86U86 1689 aa15.24■□□□□ 0.03
STRADA-250ENST00000640827 GRIN2BQ13224 1484 aa15.21■□□□□ 0.03
STRADA-250ENST00000640827 SNAPC4Q5SXM2 1469 aa15.21■□□□□ 0.02
STRADA-250ENST00000640827 CHD1O14646 1710 aa15.18■□□□□ 0.02
STRADA-250ENST00000640827 TRIM41Q8WV44 630 aa15.17■□□□□ 0.02
STRADA-250ENST00000640827 MAGI1Q96QZ7 1491 aaPredicted RBP15.16■□□□□ 0.02
STRADA-250ENST00000640827 FBLN2P98095 1184 aa15.13■□□□□ 0.01
STRADA-250ENST00000640827 ERICH3Q5RHP9 1530 aa15.12■□□□□ 0.01
STRADA-250ENST00000640827 KIF27Q86VH2 1401 aa15.12■□□□□ 0.01
STRADA-250ENST00000640827 OSCARQ8IYS5 282 aa15.11■□□□□ 0.01
STRADA-250ENST00000640827 ADAMTS12P58397 1594 aa15.11■□□□□ 0.01
STRADA-250ENST00000640827 SYNJ2O15056 1496 aa15.1■□□□□ 0.01
STRADA-250ENST00000640827 RUSC2Q8N2Y8 1516 aa15.1■□□□□ 0.01
STRADA-250ENST00000640827 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
STRADA-250ENST00000640827 CHMP7Q8WUX9 453 aaPredicted RBP15.09■□□□□ 0.01
STRADA-250ENST00000640827 IGF1RP08069 1367 aa15.07■□□□□ 0
STRADA-250ENST00000640827 FHAD1B1AJZ9 1412 aa15.06■□□□□ 0
STRADA-250ENST00000640827 GRIN2AQ12879 1464 aa15.03■□□□□ -0
STRADA-250ENST00000640827 CUL7Q14999 1698 aa15.01□□□□□ -0.01
STRADA-250ENST00000640827 AEBP2Q6ZN18 517 aaPredicted RBP15.01□□□□□ -0.01
STRADA-250ENST00000640827 CLASP1Q7Z460 1538 aa14.99□□□□□ -0.01
STRADA-250ENST00000640827 CEP170Q5SW79 1584 aa14.98□□□□□ -0.01
STRADA-250ENST00000640827 CARMIL1Q5VZK9 1371 aa14.98□□□□□ -0.01
STRADA-250ENST00000640827 NUP160Q12769 1436 aa14.96□□□□□ -0.02
STRADA-250ENST00000640827 RIMBP3CA6NJZ7 1639 aa14.91□□□□□ -0.02
STRADA-250ENST00000640827 RIMBP3BA6NNM3 1639 aa14.91□□□□□ -0.02
STRADA-250ENST00000640827 RIMBP3Q9UFD9 1639 aa14.91□□□□□ -0.02
STRADA-250ENST00000640827 FAM9AQ8IZU1 332 aaPredicted RBP14.9□□□□□ -0.02
STRADA-250ENST00000640827 ARHGEF11O15085 1522 aa14.9□□□□□ -0.02
STRADA-250ENST00000640827 RAPGEF2Q9Y4G8 1499 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms