RNA–Protein interactions for RNA: ENST00000640717.1

SPIN3-243, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-243ENST00000640717 ZNF326Q5BKZ1 582 aaKnown RBP18.21■□□□□ 0.51
SPIN3-243ENST00000640717 ARHGEF11O15085 1522 aa18.21■□□□□ 0.51
SPIN3-243ENST00000640717 TROQ12816 1431 aaPredicted RBP18.21■□□□□ 0.51
SPIN3-243ENST00000640717 ABCC5O15440 1437 aa18.2■□□□□ 0.5
SPIN3-243ENST00000640717 KIF14Q15058 1648 aa18.19■□□□□ 0.5
SPIN3-243ENST00000640717 CNGB1Q14028 1251 aaPredicted RBP18.18■□□□□ 0.5
SPIN3-243ENST00000640717 DAPK1P53355 1430 aa18.18■□□□□ 0.5
SPIN3-243ENST00000640717 ATP10BO94823 1461 aa18.18■□□□□ 0.5
SPIN3-243ENST00000640717 ERCC6L2Q5T890 1561 aa18.16■□□□□ 0.5
SPIN3-243ENST00000640717 MIA2Q96PC5 1412 aa18.16■□□□□ 0.5
SPIN3-243ENST00000640717 GPATCH8Q9UKJ3 1502 aaKnown RBP18.14■□□□□ 0.49
SPIN3-243ENST00000640717 L3MBTL2Q969R5 705 aa18.14■□□□□ 0.49
SPIN3-243ENST00000640717 TCOF1Q13428 1488 aaKnown RBP18.13■□□□□ 0.49
SPIN3-243ENST00000640717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.12■□□□□ 0.49
SPIN3-243ENST00000640717 TSPY4P0CV99 314 aa18.11■□□□□ 0.49
SPIN3-243ENST00000640717 TSPY10P0CW01 314 aa18.11■□□□□ 0.49
SPIN3-243ENST00000640717 CAMSAP2Q08AD1 1489 aa18.11■□□□□ 0.49
SPIN3-243ENST00000640717 CHD1O14646 1710 aa18.1■□□□□ 0.49
SPIN3-243ENST00000640717 POLR3GLQ9BT43 218 aa18.09■□□□□ 0.49
SPIN3-243ENST00000640717 DENND4BO75064 1496 aaPredicted RBP18.08■□□□□ 0.49
SPIN3-243ENST00000640717 PKD2Q13563 968 aa18.08■□□□□ 0.49
SPIN3-243ENST00000640717 KDM2AQ9Y2K7 1162 aa18.04■□□□□ 0.48
SPIN3-243ENST00000640717 MYT1LQ9UL68 1186 aa18.04■□□□□ 0.48
SPIN3-243ENST00000640717 HSPA5P11021 654 aaKnown RBP18.03■□□□□ 0.48
SPIN3-243ENST00000640717 ABCA8O94911 1581 aa18.03■□□□□ 0.48
SPIN3-243ENST00000640717 NBPF8Q3BBV2 869 aa18.02■□□□□ 0.48
SPIN3-243ENST00000640717 NCOA1Q15788 1441 aa18.02■□□□□ 0.48
SPIN3-243ENST00000640717 TIMELESSQ9UNS1 1208 aa18.02■□□□□ 0.48
SPIN3-243ENST00000640717 AKNAQ7Z591 1439 aa18.02■□□□□ 0.47
SPIN3-243ENST00000640717 NUP155O75694 1391 aa18.01■□□□□ 0.47
SPIN3-243ENST00000640717 ANKRD30AQ9BXX3 1397 aa18■□□□□ 0.47
SPIN3-243ENST00000640717 ANKRD50Q9ULJ7 1429 aa17.97■□□□□ 0.47
SPIN3-243ENST00000640717 DNMT1P26358 1616 aaKnown RBP17.97■□□□□ 0.47
SPIN3-243ENST00000640717 RGL3Q3MIN7 710 aa17.97■□□□□ 0.47
SPIN3-243ENST00000640717 ROCK1Q13464 1354 aa17.96■□□□□ 0.47
SPIN3-243ENST00000640717 C9orf84Q5VXU9 1444 aa17.96■□□□□ 0.47
SPIN3-243ENST00000640717 ANKRD30BQ9BXX2 1392 aa17.95■□□□□ 0.46
SPIN3-243ENST00000640717 ABCC10Q5T3U5 1492 aa17.95■□□□□ 0.46
SPIN3-243ENST00000640717 KIF15Q9NS87 1388 aa17.95■□□□□ 0.46
SPIN3-243ENST00000640717 C11orf95C9JLR9 678 aaPredicted RBP17.94■□□□□ 0.46
SPIN3-243ENST00000640717 EIF4G2P78344 907 aaKnown RBP eCLIP17.93■□□□□ 0.46
SPIN3-243ENST00000640717 ANP32CO43423 234 aa17.93■□□□□ 0.46
SPIN3-243ENST00000640717 AFAP1Q8N556 730 aa17.93■□□□□ 0.46
SPIN3-243ENST00000640717 GCC2Q8IWJ2 1684 aa17.92■□□□□ 0.46
SPIN3-243ENST00000640717 ARHGAP5Q13017 1502 aa17.91■□□□□ 0.46
SPIN3-243ENST00000640717 WASHC2AQ641Q2 1341 aa17.89■□□□□ 0.45
SPIN3-243ENST00000640717 SENP3-EIF4A1A0A087X0R7 540 aa17.89■□□□□ 0.45
SPIN3-243ENST00000640717 PZPP20742 1482 aa17.89■□□□□ 0.45
SPIN3-243ENST00000640717 CDC42BPAQ5VT25 1732 aa17.89■□□□□ 0.45
SPIN3-243ENST00000640717 DCAF11Q8TEB1 546 aa17.87■□□□□ 0.45
SPIN3-243ENST00000640717 KDM5BQ9UGL1 1544 aa17.87■□□□□ 0.45
SPIN3-243ENST00000640717 ITSN2Q9NZM3 1697 aa17.86■□□□□ 0.45
SPIN3-243ENST00000640717 SYCP2Q9BX26 1530 aa17.85■□□□□ 0.45
SPIN3-243ENST00000640717 TTC37Q6PGP7 1564 aa17.85■□□□□ 0.45
SPIN3-243ENST00000640717 EFCAB2Q5VUJ9 269 aa17.83■□□□□ 0.45
SPIN3-243ENST00000640717 MBD5Q9P267 1494 aa17.83■□□□□ 0.44
SPIN3-243ENST00000640717 OSCARQ8IYS5 282 aa17.82■□□□□ 0.44
SPIN3-243ENST00000640717 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.82■□□□□ 0.44
SPIN3-243ENST00000640717 ABCC2Q92887 1545 aa17.82■□□□□ 0.44
SPIN3-243ENST00000640717 RPRD2Q5VT52 1461 aaKnown RBP17.81■□□□□ 0.44
SPIN3-243ENST00000640717 KIAA1107Q9UPP5 1409 aa17.81■□□□□ 0.44
SPIN3-243ENST00000640717 ADCY10Q96PN6 1610 aa17.81■□□□□ 0.44
SPIN3-243ENST00000640717 SAMD9LQ8IVG5 1584 aa17.8■□□□□ 0.44
SPIN3-243ENST00000640717 CCDC141Q6ZP82 1450 aa17.79■□□□□ 0.44
SPIN3-243ENST00000640717 CCDC184Q52MB2 194 aa17.78■□□□□ 0.44
SPIN3-243ENST00000640717 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.44
SPIN3-243ENST00000640717 BCANQ96GW7 911 aa17.77■□□□□ 0.44
SPIN3-243ENST00000640717 PLEKHH2Q8IVE3 1493 aa17.77■□□□□ 0.44
SPIN3-243ENST00000640717 ARHGEF12Q9NZN5 1544 aa17.77■□□□□ 0.43
SPIN3-243ENST00000640717 TRAPPC8Q9Y2L5 1435 aa17.77■□□□□ 0.43
SPIN3-243ENST00000640717 CARD11Q9BXL7 1154 aa17.77■□□□□ 0.43
SPIN3-243ENST00000640717 SHROOM2Q13796 1616 aa17.77■□□□□ 0.43
SPIN3-243ENST00000640717 CDC42BPBQ9Y5S2 1711 aa17.76■□□□□ 0.43
SPIN3-243ENST00000640717 ADGRL2O95490 1459 aa17.76■□□□□ 0.43
SPIN3-243ENST00000640717 NPM1P06748 294 aaKnown RBP eCLIP17.76■□□□□ 0.43
SPIN3-243ENST00000640717 SPAG9O60271 1321 aaKnown RBP17.75■□□□□ 0.43
SPIN3-243ENST00000640717 TEX14Q8IWB6 1497 aa17.75■□□□□ 0.43
SPIN3-243ENST00000640717 CLASP1Q7Z460 1538 aa17.74■□□□□ 0.43
SPIN3-243ENST00000640717 KIF7Q2M1P5 1343 aa17.72■□□□□ 0.43
SPIN3-243ENST00000640717 FAM9BQ8IZU0 186 aa17.72■□□□□ 0.43
SPIN3-243ENST00000640717 CYB5RLQ6IPT4 315 aa17.72■□□□□ 0.43
SPIN3-243ENST00000640717 RSPH4AQ5TD94 716 aa17.72■□□□□ 0.43
SPIN3-243ENST00000640717 ZCCHC11Q5TAX3 1644 aaKnown RBP17.71■□□□□ 0.43
SPIN3-243ENST00000640717 NBPF1Q3BBV0 1214 aa17.71■□□□□ 0.43
SPIN3-243ENST00000640717 KIF3BO15066 747 aa17.71■□□□□ 0.43
SPIN3-243ENST00000640717 ADGBQ8N7X0 1667 aa17.7■□□□□ 0.42
SPIN3-243ENST00000640717 ST20-MTHFSA0A0A6YYL1 179 aa17.7■□□□□ 0.42
SPIN3-243ENST00000640717 PLCH2O75038 1416 aa17.69■□□□□ 0.42
SPIN3-243ENST00000640717 HNRNPUQ00839 825 aaKnown RBP eCLIP17.69■□□□□ 0.42
SPIN3-243ENST00000640717 CROCC2H7BZ55 1655 aa17.69■□□□□ 0.42
SPIN3-243ENST00000640717 PREX2Q70Z35 1606 aa17.69■□□□□ 0.42
SPIN3-243ENST00000640717 USP47Q96K76 1375 aa17.69■□□□□ 0.42
SPIN3-243ENST00000640717 CCDC7Q96M83 1385 aa17.68■□□□□ 0.42
SPIN3-243ENST00000640717 SCAPERQ9BY12 1400 aa17.67■□□□□ 0.42
SPIN3-243ENST00000640717 SHANK2Q9UPX8 1470 aa17.66■□□□□ 0.42
SPIN3-243ENST00000640717 CCDC144AA2RUR9 1427 aa17.65■□□□□ 0.42
SPIN3-243ENST00000640717 ASXL2Q76L83 1435 aa17.64■□□□□ 0.41
SPIN3-243ENST00000640717 FAM135AQ9P2D6 1515 aa17.64■□□□□ 0.41
SPIN3-243ENST00000640717 MRS2Q9HD23 443 aa17.64■□□□□ 0.41
SPIN3-243ENST00000640717 CHGAP10645 457 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms