RNA–Protein interactions for RNA: ENST00000640041.1

TCEA1-213, Transcript of transcription elongation factor A1, humanhuman

TSL 5 BASIC

Gene TCEA1, Length 1,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-213ENST00000640041 MTUS2Q5JR59 1369 aa38.22■■■■□ 3.71
TCEA1-213ENST00000640041 VPS8Q8N3P4 1428 aa38.2■■■■□ 3.71
TCEA1-213ENST00000640041 PREX2Q70Z35 1606 aa38.18■■■■□ 3.7
TCEA1-213ENST00000640041 CDC42BPBQ9Y5S2 1711 aa38.18■■■■□ 3.7
TCEA1-213ENST00000640041 POGZQ7Z3K3 1410 aa38.15■■■■□ 3.7
TCEA1-213ENST00000640041 CDC42BPAQ5VT25 1732 aa38.11■■■■□ 3.69
TCEA1-213ENST00000640041 ZMYM4Q5VZL5 1548 aa38.11■■■■□ 3.69
TCEA1-213ENST00000640041 EHBP1L1Q8N3D4 1523 aa38.1■■■■□ 3.69
TCEA1-213ENST00000640041 ARHGEF40Q8TER5 1519 aa38.07■■■■□ 3.69
TCEA1-213ENST00000640041 GPATCH8Q9UKJ3 1502 aaKnown RBP38.07■■■■□ 3.69
TCEA1-213ENST00000640041 CCNB3Q8WWL7 1395 aa38.05■■■■□ 3.68
TCEA1-213ENST00000640041 TIAM1Q13009 1591 aa38.04■■■■□ 3.68
TCEA1-213ENST00000640041 YEATS2Q9ULM3 1422 aa38.04■■■■□ 3.68
TCEA1-213ENST00000640041 ZFYVE16Q7Z3T8 1539 aa38.03■■■■□ 3.68
TCEA1-213ENST00000640041 ZNF777Q9ULD5 760 aaPredicted RBP38.03■■■■□ 3.68
TCEA1-213ENST00000640041 MAGI2Q86UL8 1455 aa38.02■■■■□ 3.68
TCEA1-213ENST00000640041 AFAP1Q8N556 730 aa38.01■■■■□ 3.68
TCEA1-213ENST00000640041 ZNF518AQ6AHZ1 1483 aa38.01■■■■□ 3.67
TCEA1-213ENST00000640041 ABCC1P33527 1531 aa38.01■■■■□ 3.67
TCEA1-213ENST00000640041 ARHGEF12Q9NZN5 1544 aa37.97■■■■□ 3.67
TCEA1-213ENST00000640041 ARID4BQ4LE39 1312 aaPredicted RBP37.97■■■■□ 3.67
TCEA1-213ENST00000640041 CFDP1Q9UEE9 299 aaPredicted RBP37.97■■■■□ 3.67
TCEA1-213ENST00000640041 SAMD9LQ8IVG5 1584 aa37.94■■■■□ 3.66
TCEA1-213ENST00000640041 TRAPPC8Q9Y2L5 1435 aa37.94■■■■□ 3.66
TCEA1-213ENST00000640041 KDM5CP41229 1560 aa37.93■■■■□ 3.66
TCEA1-213ENST00000640041 ITSN2Q9NZM3 1697 aa37.92■■■■□ 3.66
TCEA1-213ENST00000640041 MYT1LQ9UL68 1186 aa37.9■■■■□ 3.66
TCEA1-213ENST00000640041 SUPT6HQ7KZ85 1726 aaKnown RBP37.89■■■■□ 3.66
TCEA1-213ENST00000640041 NCOA2Q15596 1464 aa37.89■■■■□ 3.66
TCEA1-213ENST00000640041 LRRC9Q6ZRR7 1453 aa37.89■■■■□ 3.66
TCEA1-213ENST00000640041 MAP3K1Q13233 1512 aa37.86■■■■□ 3.65
TCEA1-213ENST00000640041 SYCP2Q9BX26 1530 aa37.86■■■■□ 3.65
TCEA1-213ENST00000640041 HECW2Q9P2P5 1572 aa37.85■■■■□ 3.65
TCEA1-213ENST00000640041 HNRNPMP52272 730 aaKnown RBP eCLIP37.85■■■■□ 3.651e-6■■■■□ 21.8
TCEA1-213ENST00000640041 ATP10AO60312 1499 aa37.84■■■■□ 3.65
TCEA1-213ENST00000640041 KANK4Q5T7N3 995 aaPredicted RBP37.83■■■■□ 3.65
TCEA1-213ENST00000640041 BCORL1Q5H9F3 1711 aa37.83■■■■□ 3.65
TCEA1-213ENST00000640041 SIGLEC1Q9BZZ2 1709 aa37.82■■■■□ 3.65
TCEA1-213ENST00000640041 PLEKHH2Q8IVE3 1493 aa37.81■■■■□ 3.64
TCEA1-213ENST00000640041 MLH3Q9UHC1 1453 aa37.81■■■■□ 3.64
TCEA1-213ENST00000640041 ADAMTSL3P82987 1691 aa37.8■■■■□ 3.64
TCEA1-213ENST00000640041 ZNF644Q9H582 1327 aaPredicted RBP37.8■■■■□ 3.64
TCEA1-213ENST00000640041 C9orf84Q5VXU9 1444 aa37.79■■■■□ 3.64
TCEA1-213ENST00000640041 KIAA1107Q9UPP5 1409 aa37.78■■■■□ 3.64
TCEA1-213ENST00000640041 APLP2Q06481 763 aa37.77■■■■□ 3.64
TCEA1-213ENST00000640041 DIP2CQ9Y2E4 1556 aa37.75■■■■□ 3.63
TCEA1-213ENST00000640041 ABCA6Q8N139 1617 aa37.72■■■■□ 3.63
TCEA1-213ENST00000640041 MLECQ14165 292 aa37.72■■■■□ 3.63
TCEA1-213ENST00000640041 MADDQ8WXG6 1647 aa37.72■■■■□ 3.63
TCEA1-213ENST00000640041 SPAG9O60271 1321 aaKnown RBP37.69■■■■□ 3.62
TCEA1-213ENST00000640041 KIDINS220Q9ULH0 1771 aa37.69■■■■□ 3.62
TCEA1-213ENST00000640041 PTPRMP28827 1452 aa37.66■■■■□ 3.62
TCEA1-213ENST00000640041 CAMSAP2Q08AD1 1489 aa37.64■■■■□ 3.62
TCEA1-213ENST00000640041 MBD5Q9P267 1494 aa37.64■■■■□ 3.62
TCEA1-213ENST00000640041 REREQ9P2R6 1566 aa37.62■■■■□ 3.61
TCEA1-213ENST00000640041 ATP7AQ04656 1500 aa37.6■■■■□ 3.61
TCEA1-213ENST00000640041 RIMS1Q86UR5 1692 aaKnown RBP37.6■■■■□ 3.61
TCEA1-213ENST00000640041 INO80Q9ULG1 1556 aaPredicted RBP37.58■■■■□ 3.61
TCEA1-213ENST00000640041 MYOM3Q5VTT5 1437 aa37.54■■■■□ 3.6
TCEA1-213ENST00000640041 CCDC141Q6ZP82 1450 aa37.51■■■■□ 3.59
TCEA1-213ENST00000640041 AGLP35573 1532 aa37.51■■■■□ 3.59
TCEA1-213ENST00000640041 FER1L4A9Z1Z3 1794 aa37.5■■■■□ 3.59
TCEA1-213ENST00000640041 PLPPR3Q6T4P5 718 aa37.49■■■■□ 3.59
TCEA1-213ENST00000640041 MIA2Q96PC5 1412 aa37.48■■■■□ 3.59
TCEA1-213ENST00000640041 RSPH4AQ5TD94 716 aa37.46■■■■□ 3.59
TCEA1-213ENST00000640041 RTEL1-TNFRSF6BF6WH68 1400 aa37.44■■■■□ 3.58
TCEA1-213ENST00000640041 A2MP01023 1474 aa37.44■■■■□ 3.58
TCEA1-213ENST00000640041 ARHGEF5Q12774 1597 aa37.43■■■■□ 3.58
TCEA1-213ENST00000640041 PLXNC1O60486 1568 aa37.38■■■■□ 3.58
TCEA1-213ENST00000640041 ADGBQ8N7X0 1667 aa37.37■■■■□ 3.57
TCEA1-213ENST00000640041 TSPY4P0CV99 314 aa37.36■■■■□ 3.57
TCEA1-213ENST00000640041 TSPY10P0CW01 314 aa37.36■■■■□ 3.57
TCEA1-213ENST00000640041 ESF1Q9H501 851 aaKnown RBP37.33■■■■□ 3.57
TCEA1-213ENST00000640041 FGD6Q6ZV73 1430 aa37.31■■■■□ 3.56
TCEA1-213ENST00000640041 CEBPAP49715 358 aaPredicted RBP37.31■■■■□ 3.56
TCEA1-213ENST00000640041 PTPN23Q9H3S7 1636 aa37.31■■■■□ 3.56
TCEA1-213ENST00000640041 DHX29Q7Z478 1369 aaKnown RBP37.28■■■■□ 3.56
TCEA1-213ENST00000640041 GGT6Q6P531 493 aa37.25■■■■□ 3.55
TCEA1-213ENST00000640041 MAST1Q9Y2H9 1570 aa37.24■■■■□ 3.55
TCEA1-213ENST00000640041 TCOF1Q13428 1488 aaKnown RBP37.22■■■■□ 3.55
TCEA1-213ENST00000640041 LMTK3Q96Q04 1460 aa37.2■■■■□ 3.55
TCEA1-213ENST00000640041 CNTLNQ9NXG0 1405 aa37.2■■■■□ 3.55
TCEA1-213ENST00000640041 ABCC5O15440 1437 aa37.18■■■■□ 3.54
TCEA1-213ENST00000640041 C3P01024 1663 aa37.17■■■■□ 3.54
TCEA1-213ENST00000640041 KIF3BO15066 747 aa37.16■■■■□ 3.54
TCEA1-213ENST00000640041 PPARGC1BQ86YN6 1023 aaKnown RBP37.15■■■■□ 3.54
TCEA1-213ENST00000640041 DAPK1P53355 1430 aa37.13■■■■□ 3.53
TCEA1-213ENST00000640041 CROCC2H7BZ55 1655 aa37.12■■■■□ 3.53
TCEA1-213ENST00000640041 DNMT1P26358 1616 aaKnown RBP37.11■■■■□ 3.53
TCEA1-213ENST00000640041 CLTCQ00610 1675 aaKnown RBP37.11■■■■□ 3.53
TCEA1-213ENST00000640041 SHANK2Q9UPX8 1470 aa37.1■■■■□ 3.53
TCEA1-213ENST00000640041 ZMYM3Q14202 1370 aa37.09■■■■□ 3.53
TCEA1-213ENST00000640041 FAM50AQ14320 339 aaKnown RBP37.09■■■■□ 3.53
TCEA1-213ENST00000640041 MROH2AA6NES4 1674 aa37.09■■■■□ 3.53
TCEA1-213ENST00000640041 PPP6R1Q9UPN7 881 aa37.07■■■■□ 3.52
TCEA1-213ENST00000640041 HSPA2P54652 639 aa37.06■■■■□ 3.52
TCEA1-213ENST00000640041 PREX1Q8TCU6 1659 aa37.05■■■■□ 3.52
TCEA1-213ENST00000640041 RRP7BPQ9NSQ0 103 aa37.02■■■■□ 3.52
TCEA1-213ENST00000640041 CHIC2Q9UKJ5 165 aa37.02■■■■□ 3.52
TCEA1-213ENST00000640041 KIF15Q9NS87 1388 aa37.01■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms