RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 APLP2Q06481 763 aa24.94■■□□□ 1.58
SPIN3-233ENST00000640039 DENND4BO75064 1496 aaPredicted RBP24.93■■□□□ 1.58
SPIN3-233ENST00000640039 CDC42BPBQ9Y5S2 1711 aa24.92■■□□□ 1.58
SPIN3-233ENST00000640039 MAP3K1Q13233 1512 aa24.92■■□□□ 1.58
SPIN3-233ENST00000640039 RAPGEF3O95398 923 aa24.92■■□□□ 1.58
SPIN3-233ENST00000640039 CDC42BPAQ5VT25 1732 aa24.92■■□□□ 1.58
SPIN3-233ENST00000640039 CCNB3Q8WWL7 1395 aa24.91■■□□□ 1.58
SPIN3-233ENST00000640039 SUPT6HQ7KZ85 1726 aaKnown RBP24.89■■□□□ 1.57
SPIN3-233ENST00000640039 SCAPERQ9BY12 1400 aa24.88■■□□□ 1.57
SPIN3-233ENST00000640039 LRRC9Q6ZRR7 1453 aa24.88■■□□□ 1.57
SPIN3-233ENST00000640039 HECW2Q9P2P5 1572 aa24.87■■□□□ 1.57
SPIN3-233ENST00000640039 GPATCH8Q9UKJ3 1502 aaKnown RBP24.86■■□□□ 1.57
SPIN3-233ENST00000640039 FRMPD1Q5SYB0 1578 aa24.86■■□□□ 1.57
SPIN3-233ENST00000640039 RICTORQ6R327 1708 aa24.86■■□□□ 1.57
SPIN3-233ENST00000640039 ITSN2Q9NZM3 1697 aa24.83■■□□□ 1.57
SPIN3-233ENST00000640039 CFDP1Q9UEE9 299 aaPredicted RBP24.83■■□□□ 1.57
SPIN3-233ENST00000640039 POGZQ7Z3K3 1410 aa24.83■■□□□ 1.57
SPIN3-233ENST00000640039 NCOA2Q15596 1464 aa24.83■■□□□ 1.56
SPIN3-233ENST00000640039 ZNF777Q9ULD5 760 aaPredicted RBP24.82■■□□□ 1.56
SPIN3-233ENST00000640039 KANK4Q5T7N3 995 aaPredicted RBP24.79■■□□□ 1.56
SPIN3-233ENST00000640039 ABCC1P33527 1531 aa24.79■■□□□ 1.56
SPIN3-233ENST00000640039 ZNF518AQ6AHZ1 1483 aa24.78■■□□□ 1.56
SPIN3-233ENST00000640039 ZMYM4Q5VZL5 1548 aa24.78■■□□□ 1.56
SPIN3-233ENST00000640039 ADAMTSL3P82987 1691 aa24.77■■□□□ 1.56
SPIN3-233ENST00000640039 SAMD9LQ8IVG5 1584 aa24.76■■□□□ 1.55
SPIN3-233ENST00000640039 PLEKHH2Q8IVE3 1493 aa24.75■■□□□ 1.55
SPIN3-233ENST00000640039 MAGI2Q86UL8 1455 aa24.74■■□□□ 1.55
SPIN3-233ENST00000640039 ARHGEF40Q8TER5 1519 aa24.73■■□□□ 1.55
SPIN3-233ENST00000640039 ZFYVE16Q7Z3T8 1539 aa24.72■■□□□ 1.55
SPIN3-233ENST00000640039 SYCP2Q9BX26 1530 aa24.71■■□□□ 1.55
SPIN3-233ENST00000640039 AFAP1Q8N556 730 aa24.71■■□□□ 1.55
SPIN3-233ENST00000640039 MYT1LQ9UL68 1186 aa24.71■■□□□ 1.55
SPIN3-233ENST00000640039 KDM5CP41229 1560 aa24.71■■□□□ 1.55
SPIN3-233ENST00000640039 ARHGEF12Q9NZN5 1544 aa24.71■■□□□ 1.55
SPIN3-233ENST00000640039 PTPRMP28827 1452 aa24.7■■□□□ 1.54
SPIN3-233ENST00000640039 KIAA1107Q9UPP5 1409 aa24.69■■□□□ 1.54
SPIN3-233ENST00000640039 TRAPPC8Q9Y2L5 1435 aa24.69■■□□□ 1.54
SPIN3-233ENST00000640039 BCORL1Q5H9F3 1711 aa24.69■■□□□ 1.54
SPIN3-233ENST00000640039 ILDR1Q86SU0 546 aaPredicted RBP24.68■■□□□ 1.54
SPIN3-233ENST00000640039 HNRNPMP52272 730 aaKnown RBP eCLIP24.67■■□□□ 1.54
SPIN3-233ENST00000640039 YEATS2Q9ULM3 1422 aa24.67■■□□□ 1.54
SPIN3-233ENST00000640039 ZNF644Q9H582 1327 aaPredicted RBP24.64■■□□□ 1.54
SPIN3-233ENST00000640039 MYOM3Q5VTT5 1437 aa24.64■■□□□ 1.54
SPIN3-233ENST00000640039 CAMSAP2Q08AD1 1489 aa24.63■■□□□ 1.53
SPIN3-233ENST00000640039 ARID4BQ4LE39 1312 aaPredicted RBP24.62■■□□□ 1.53
SPIN3-233ENST00000640039 MADDQ8WXG6 1647 aa24.62■■□□□ 1.53
SPIN3-233ENST00000640039 MLH3Q9UHC1 1453 aa24.62■■□□□ 1.53
SPIN3-233ENST00000640039 MIA2Q96PC5 1412 aa24.6■■□□□ 1.53
SPIN3-233ENST00000640039 SPAG9O60271 1321 aaKnown RBP24.6■■□□□ 1.53
SPIN3-233ENST00000640039 ATP10AO60312 1499 aa24.59■■□□□ 1.53
SPIN3-233ENST00000640039 C9orf84Q5VXU9 1444 aa24.58■■□□□ 1.53
SPIN3-233ENST00000640039 SIGLEC1Q9BZZ2 1709 aa24.58■■□□□ 1.52
SPIN3-233ENST00000640039 MBD5Q9P267 1494 aa24.57■■□□□ 1.52
SPIN3-233ENST00000640039 DIP2CQ9Y2E4 1556 aa24.55■■□□□ 1.52
SPIN3-233ENST00000640039 KIDINS220Q9ULH0 1771 aa24.55■■□□□ 1.52
SPIN3-233ENST00000640039 RSPH4AQ5TD94 716 aa24.55■■□□□ 1.52
SPIN3-233ENST00000640039 ABCA6Q8N139 1617 aa24.54■■□□□ 1.52
SPIN3-233ENST00000640039 CCDC141Q6ZP82 1450 aa24.54■■□□□ 1.52
SPIN3-233ENST00000640039 ATP7AQ04656 1500 aa24.53■■□□□ 1.52
SPIN3-233ENST00000640039 ARHGEF5Q12774 1597 aa24.51■■□□□ 1.51
SPIN3-233ENST00000640039 INO80Q9ULG1 1556 aaPredicted RBP24.51■■□□□ 1.51
SPIN3-233ENST00000640039 RIMS1Q86UR5 1692 aaKnown RBP24.51■■□□□ 1.51
SPIN3-233ENST00000640039 FGD6Q6ZV73 1430 aa24.5■■□□□ 1.51
SPIN3-233ENST00000640039 PTPN23Q9H3S7 1636 aa24.5■■□□□ 1.51
SPIN3-233ENST00000640039 REREQ9P2R6 1566 aa24.49■■□□□ 1.51
SPIN3-233ENST00000640039 LMTK3Q96Q04 1460 aa24.48■■□□□ 1.51
SPIN3-233ENST00000640039 TSPY4P0CV99 314 aa24.47■■□□□ 1.51
SPIN3-233ENST00000640039 TSPY10P0CW01 314 aa24.47■■□□□ 1.51
SPIN3-233ENST00000640039 RTEL1-TNFRSF6BF6WH68 1400 aa24.46■■□□□ 1.51
SPIN3-233ENST00000640039 MLECQ14165 292 aa24.44■■□□□ 1.5
SPIN3-233ENST00000640039 PPARGC1BQ86YN6 1023 aaKnown RBP24.44■■□□□ 1.5
SPIN3-233ENST00000640039 TCOF1Q13428 1488 aaKnown RBP24.42■■□□□ 1.5
SPIN3-233ENST00000640039 ADGBQ8N7X0 1667 aa24.42■■□□□ 1.5
SPIN3-233ENST00000640039 AGLP35573 1532 aa24.4■■□□□ 1.5
SPIN3-233ENST00000640039 A2MP01023 1474 aa24.4■■□□□ 1.5
SPIN3-233ENST00000640039 MAST1Q9Y2H9 1570 aa24.37■■□□□ 1.49
SPIN3-233ENST00000640039 FAM50AQ14320 339 aaKnown RBP24.37■■□□□ 1.49
SPIN3-233ENST00000640039 FER1L4A9Z1Z3 1794 aa24.37■■□□□ 1.49
SPIN3-233ENST00000640039 PLXNC1O60486 1568 aa24.36■■□□□ 1.49
SPIN3-233ENST00000640039 DNMT1P26358 1616 aaKnown RBP24.35■■□□□ 1.49
SPIN3-233ENST00000640039 CROCC2H7BZ55 1655 aa24.34■■□□□ 1.49
SPIN3-233ENST00000640039 ABCC5O15440 1437 aa24.34■■□□□ 1.49
SPIN3-233ENST00000640039 DAPK1P53355 1430 aa24.34■■□□□ 1.49
SPIN3-233ENST00000640039 SHANK2Q9UPX8 1470 aa24.33■■□□□ 1.49
SPIN3-233ENST00000640039 DHX29Q7Z478 1369 aaKnown RBP24.31■■□□□ 1.48
SPIN3-233ENST00000640039 HSPA2P54652 639 aa24.31■■□□□ 1.48
SPIN3-233ENST00000640039 PLPPR3Q6T4P5 718 aa24.31■■□□□ 1.48
SPIN3-233ENST00000640039 ESF1Q9H501 851 aaKnown RBP24.31■■□□□ 1.48
SPIN3-233ENST00000640039 FBXO41Q8TF61 875 aa24.27■■□□□ 1.48
SPIN3-233ENST00000640039 KIF3BO15066 747 aa24.24■■□□□ 1.47
SPIN3-233ENST00000640039 GGT6Q6P531 493 aa24.24■■□□□ 1.47
SPIN3-233ENST00000640039 CEBPAP49715 358 aaPredicted RBP24.23■■□□□ 1.47
SPIN3-233ENST00000640039 CHIC2Q9UKJ5 165 aa24.23■■□□□ 1.47
SPIN3-233ENST00000640039 KIF15Q9NS87 1388 aa24.23■■□□□ 1.47
SPIN3-233ENST00000640039 DUOX2Q9NRD8 1548 aa24.22■■□□□ 1.47
SPIN3-233ENST00000640039 CNTLNQ9NXG0 1405 aa24.22■■□□□ 1.47
SPIN3-233ENST00000640039 ANKRD30AQ9BXX3 1397 aa24.22■■□□□ 1.47
SPIN3-233ENST00000640039 RRP7BPQ9NSQ0 103 aa24.21■■□□□ 1.47
SPIN3-233ENST00000640039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.2■■□□□ 1.46
SPIN3-233ENST00000640039 PREX1Q8TCU6 1659 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms