RNA–Protein interactions for RNA: ENST00000639418.1

SPIN3-221, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-221ENST00000639418 CNTLNQ9NXG0 1405 aa18.26■□□□□ 0.51
SPIN3-221ENST00000639418 DNMT1P26358 1616 aaKnown RBP18.26■□□□□ 0.51
SPIN3-221ENST00000639418 KIAA0556O60303 1618 aa18.26■□□□□ 0.51
SPIN3-221ENST00000639418 ABCC5O15440 1437 aa18.25■□□□□ 0.51
SPIN3-221ENST00000639418 ANKRD30BQ9BXX2 1392 aa18.25■□□□□ 0.51
SPIN3-221ENST00000639418 DISP1Q96F81 1524 aa18.25■□□□□ 0.51
SPIN3-221ENST00000639418 ZNF608Q9ULD9 1512 aaPredicted RBP18.25■□□□□ 0.51
SPIN3-221ENST00000639418 KIAA0586Q9BVV6 1533 aa18.24■□□□□ 0.51
SPIN3-221ENST00000639418 RPRD2Q5VT52 1461 aaKnown RBP18.24■□□□□ 0.51
SPIN3-221ENST00000639418 NUP153P49790 1475 aaKnown RBP18.23■□□□□ 0.51
SPIN3-221ENST00000639418 IFT140Q96RY7 1462 aa18.23■□□□□ 0.51
SPIN3-221ENST00000639418 ZNF644Q9H582 1327 aaPredicted RBP18.23■□□□□ 0.51
SPIN3-221ENST00000639418 NCOA1Q15788 1441 aa18.22■□□□□ 0.51
SPIN3-221ENST00000639418 RAPGEF6Q8TEU7 1601 aa18.22■□□□□ 0.51
SPIN3-221ENST00000639418 C11orf95C9JLR9 678 aaPredicted RBP18.21■□□□□ 0.51
SPIN3-221ENST00000639418 CCDC7Q96M83 1385 aa18.21■□□□□ 0.51
SPIN3-221ENST00000639418 TEX14Q8IWB6 1497 aa18.2■□□□□ 0.5
SPIN3-221ENST00000639418 NBPF8Q3BBV2 869 aa18.2■□□□□ 0.5
SPIN3-221ENST00000639418 CDK11AQ9UQ88 783 aaPredicted RBP18.2■□□□□ 0.5
SPIN3-221ENST00000639418 SLC4A1APQ9BWU0 796 aaKnown RBP18.19■□□□□ 0.5
SPIN3-221ENST00000639418 RBM19Q9Y4C8 960 aaKnown RBP18.19■□□□□ 0.5
SPIN3-221ENST00000639418 CCDC184Q52MB2 194 aa18.17■□□□□ 0.5
SPIN3-221ENST00000639418 PRKRIP1Q9H875 184 aaPredicted RBP18.16■□□□□ 0.5
SPIN3-221ENST00000639418 GRIN2AQ12879 1464 aa18.16■□□□□ 0.5
SPIN3-221ENST00000639418 IRX6P78412 446 aaPredicted RBP18.14■□□□□ 0.49
SPIN3-221ENST00000639418 SPATA31E1Q6ZUB1 1445 aa18.13■□□□□ 0.49
SPIN3-221ENST00000639418 PRG4Q92954 1404 aaPredicted RBP18.13■□□□□ 0.49
SPIN3-221ENST00000639418 CAMSAP2Q08AD1 1489 aa18.13■□□□□ 0.49
SPIN3-221ENST00000639418 TROQ12816 1431 aaPredicted RBP18.12■□□□□ 0.49
SPIN3-221ENST00000639418 EIF4G3O43432 1585 aaKnown RBP18.12■□□□□ 0.49
SPIN3-221ENST00000639418 POLR1AO95602 1720 aaPredicted RBP18.12■□□□□ 0.49
SPIN3-221ENST00000639418 KIF7Q2M1P5 1343 aa18.12■□□□□ 0.49
SPIN3-221ENST00000639418 PZPP20742 1482 aa18.11■□□□□ 0.49
SPIN3-221ENST00000639418 FAM9BQ8IZU0 186 aa18.11■□□□□ 0.49
SPIN3-221ENST00000639418 MRS2Q9HD23 443 aa18.11■□□□□ 0.49
SPIN3-221ENST00000639418 CFDP1Q9UEE9 299 aaPredicted RBP18.11■□□□□ 0.49
SPIN3-221ENST00000639418 ITSN2Q9NZM3 1697 aa18.11■□□□□ 0.49
SPIN3-221ENST00000639418 ADGBQ8N7X0 1667 aa18.1■□□□□ 0.49
SPIN3-221ENST00000639418 GPATCH8Q9UKJ3 1502 aaKnown RBP18.08■□□□□ 0.48
SPIN3-221ENST00000639418 PLB1Q6P1J6 1458 aa18.07■□□□□ 0.48
SPIN3-221ENST00000639418 ZNF777Q9ULD5 760 aaPredicted RBP18.06■□□□□ 0.48
SPIN3-221ENST00000639418 KIF14Q15058 1648 aa18.06■□□□□ 0.48
SPIN3-221ENST00000639418 ERICH6BQ5W0A0 696 aa18.06■□□□□ 0.48
SPIN3-221ENST00000639418 ADCY10Q96PN6 1610 aa18.05■□□□□ 0.48
SPIN3-221ENST00000639418 KIAA1107Q9UPP5 1409 aa18.05■□□□□ 0.48
SPIN3-221ENST00000639418 CROCC2H7BZ55 1655 aa18.05■□□□□ 0.48
SPIN3-221ENST00000639418 ADGRL2O95490 1459 aa18.05■□□□□ 0.48
SPIN3-221ENST00000639418 ZBED9Q6R2W3 1325 aa18.05■□□□□ 0.48
SPIN3-221ENST00000639418 MBD5Q9P267 1494 aa18.04■□□□□ 0.48
SPIN3-221ENST00000639418 CEP170Q5SW79 1584 aa18.04■□□□□ 0.48
SPIN3-221ENST00000639418 MAGI1Q96QZ7 1491 aaPredicted RBP18.03■□□□□ 0.48
SPIN3-221ENST00000639418 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
SPIN3-221ENST00000639418 ANO8Q9HCE9 1232 aaPredicted RBP18.03■□□□□ 0.48
SPIN3-221ENST00000639418 ANKRD30AQ9BXX3 1397 aa18.02■□□□□ 0.47
SPIN3-221ENST00000639418 PKD2Q13563 968 aa18.01■□□□□ 0.47
SPIN3-221ENST00000639418 PPP4R2Q9NY27 417 aa18.01■□□□□ 0.47
SPIN3-221ENST00000639418 SYNJ2O15056 1496 aa18■□□□□ 0.47
SPIN3-221ENST00000639418 ZNF326Q5BKZ1 582 aaKnown RBP18■□□□□ 0.47
SPIN3-221ENST00000639418 USP47Q96K76 1375 aa18■□□□□ 0.47
SPIN3-221ENST00000639418 CARMIL2Q6F5E8 1435 aa17.99■□□□□ 0.47
SPIN3-221ENST00000639418 FBLN2P98095 1184 aa17.98■□□□□ 0.47
SPIN3-221ENST00000639418 ANKRD50Q9ULJ7 1429 aa17.98■□□□□ 0.47
SPIN3-221ENST00000639418 BCORL1Q5H9F3 1711 aa17.98■□□□□ 0.47
SPIN3-221ENST00000639418 DHX29Q7Z478 1369 aaKnown RBP17.97■□□□□ 0.47
SPIN3-221ENST00000639418 POLR3GLQ9BT43 218 aa17.96■□□□□ 0.47
SPIN3-221ENST00000639418 JPH4Q96JJ6 628 aa17.95■□□□□ 0.46
SPIN3-221ENST00000639418 KDM5CP41229 1560 aa17.95■□□□□ 0.46
SPIN3-221ENST00000639418 ERCC6Q03468 1493 aa17.94■□□□□ 0.46
SPIN3-221ENST00000639418 CDC42BPAQ5VT25 1732 aa17.94■□□□□ 0.46
SPIN3-221ENST00000639418 PLEKHD1A6NEE1 506 aa17.93■□□□□ 0.46
SPIN3-221ENST00000639418 CNGB1Q14028 1251 aaPredicted RBP17.93■□□□□ 0.46
SPIN3-221ENST00000639418 NUP160Q12769 1436 aa17.92■□□□□ 0.46
SPIN3-221ENST00000639418 ARID4BQ4LE39 1312 aaPredicted RBP17.92■□□□□ 0.46
SPIN3-221ENST00000639418 FANCIQ9NVI1 1328 aa17.92■□□□□ 0.46
SPIN3-221ENST00000639418 NUP155O75694 1391 aa17.92■□□□□ 0.46
SPIN3-221ENST00000639418 SHANK2Q9UPX8 1470 aa17.92■□□□□ 0.46
SPIN3-221ENST00000639418 MSH5O43196 834 aa17.92■□□□□ 0.46
SPIN3-221ENST00000639418 C9orf84Q5VXU9 1444 aa17.92■□□□□ 0.46
SPIN3-221ENST00000639418 UHRF1BP1Q6BDS2 1440 aa17.91■□□□□ 0.46
SPIN3-221ENST00000639418 ABCC10Q5T3U5 1492 aa17.91■□□□□ 0.46
SPIN3-221ENST00000639418 ABCA8O94911 1581 aa17.9■□□□□ 0.46
SPIN3-221ENST00000639418 RALGAPBQ86X10 1494 aa17.89■□□□□ 0.46
SPIN3-221ENST00000639418 B4GALNT3Q6L9W6 998 aa17.89■□□□□ 0.46
SPIN3-221ENST00000639418 SMG6Q86US8 1419 aaKnown RBP17.88■□□□□ 0.45
SPIN3-221ENST00000639418 ATP10BO94823 1461 aa17.88■□□□□ 0.45
SPIN3-221ENST00000639418 ARHGEF12Q9NZN5 1544 aa17.88■□□□□ 0.45
SPIN3-221ENST00000639418 TSPY4P0CV99 314 aa17.87■□□□□ 0.45
SPIN3-221ENST00000639418 TSPY10P0CW01 314 aa17.87■□□□□ 0.45
SPIN3-221ENST00000639418 CARD11Q9BXL7 1154 aa17.87■□□□□ 0.45
SPIN3-221ENST00000639418 ROCK2O75116 1388 aaKnown RBP17.87■□□□□ 0.45
SPIN3-221ENST00000639418 KDM5DQ9BY66 1539 aa17.87■□□□□ 0.45
SPIN3-221ENST00000639418 NUDCQ9Y266 331 aa17.83■□□□□ 0.45
SPIN3-221ENST00000639418 KDM2AQ9Y2K7 1162 aa17.83■□□□□ 0.45
SPIN3-221ENST00000639418 KIF15Q9NS87 1388 aa17.83■□□□□ 0.44
SPIN3-221ENST00000639418 HNRNPMP52272 730 aaKnown RBP eCLIP17.82■□□□□ 0.44
SPIN3-221ENST00000639418 PNISRQ8TF01 805 aaKnown RBP17.81■□□□□ 0.44
SPIN3-221ENST00000639418 TMC1Q8TDI8 760 aa17.81■□□□□ 0.44
SPIN3-221ENST00000639418 DCAF11Q8TEB1 546 aa17.81■□□□□ 0.44
SPIN3-221ENST00000639418 PTPRGP23470 1445 aa17.81■□□□□ 0.44
SPIN3-221ENST00000639418 ARHGEF5Q12774 1597 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms