RNA–Protein interactions for RNA: ENST00000639071.1

NECAP1-215, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-215ENST00000639071 GCC2Q8IWJ2 1684 aa12.91□□□□□ -0.34
NECAP1-215ENST00000639071 THOC2Q8NI27 1593 aaKnown RBP12.9□□□□□ -0.34
NECAP1-215ENST00000639071 ZNF326Q5BKZ1 582 aaKnown RBP12.9□□□□□ -0.34
NECAP1-215ENST00000639071 PPP4R2Q9NY27 417 aa12.9□□□□□ -0.34
NECAP1-215ENST00000639071 EPRSP07814 1512 aaKnown RBP12.89□□□□□ -0.35
NECAP1-215ENST00000639071 TCOF1Q13428 1488 aaKnown RBP12.89□□□□□ -0.35
NECAP1-215ENST00000639071 SLC4A1APQ9BWU0 796 aaKnown RBP12.88□□□□□ -0.35
NECAP1-215ENST00000639071 NCOA1Q15788 1441 aa12.88□□□□□ -0.35
NECAP1-215ENST00000639071 KIF7Q2M1P5 1343 aa12.88□□□□□ -0.35
NECAP1-215ENST00000639071 PDS5BQ9NTI5 1447 aa12.87□□□□□ -0.35
NECAP1-215ENST00000639071 FANCIQ9NVI1 1328 aa12.86□□□□□ -0.35
NECAP1-215ENST00000639071 ANKRD30BQ9BXX2 1392 aa12.84□□□□□ -0.35
NECAP1-215ENST00000639071 ZBED9Q6R2W3 1325 aa12.84□□□□□ -0.35
NECAP1-215ENST00000639071 KIF21AQ7Z4S6 1674 aa12.83□□□□□ -0.36
NECAP1-215ENST00000639071 DAPK1P53355 1430 aa12.83□□□□□ -0.36
NECAP1-215ENST00000639071 RPRD2Q5VT52 1461 aaKnown RBP12.82□□□□□ -0.36
NECAP1-215ENST00000639071 IQGAP2Q13576 1575 aa12.82□□□□□ -0.36
NECAP1-215ENST00000639071 ZNF777Q9ULD5 760 aaPredicted RBP12.82□□□□□ -0.36
NECAP1-215ENST00000639071 AKNAQ7Z591 1439 aa12.82□□□□□ -0.36
NECAP1-215ENST00000639071 MIA2Q96PC5 1412 aa12.82□□□□□ -0.36
NECAP1-215ENST00000639071 TEX14Q8IWB6 1497 aa12.81□□□□□ -0.36
NECAP1-215ENST00000639071 ABCC5O15440 1437 aa12.81□□□□□ -0.36
NECAP1-215ENST00000639071 WDR62O43379 1518 aa12.8□□□□□ -0.36
NECAP1-215ENST00000639071 TARBP1Q13395 1621 aaKnown RBP12.8□□□□□ -0.36
NECAP1-215ENST00000639071 ERICH6BQ5W0A0 696 aa12.79□□□□□ -0.36
NECAP1-215ENST00000639071 SPATA31E1Q6ZUB1 1445 aa12.78□□□□□ -0.36
NECAP1-215ENST00000639071 PBRM1Q86U86 1689 aa12.78□□□□□ -0.36
NECAP1-215ENST00000639071 ROCK1Q13464 1354 aa12.75□□□□□ -0.37
NECAP1-215ENST00000639071 USP47Q96K76 1375 aa12.75□□□□□ -0.37
NECAP1-215ENST00000639071 CFDP1Q9UEE9 299 aaPredicted RBP12.75□□□□□ -0.37
NECAP1-215ENST00000639071 DNMT1P26358 1616 aaKnown RBP12.74□□□□□ -0.37
NECAP1-215ENST00000639071 ADAMTS12P58397 1594 aa12.74□□□□□ -0.37
NECAP1-215ENST00000639071 PKD2Q13563 968 aa12.74□□□□□ -0.37
NECAP1-215ENST00000639071 NBR1Q14596 966 aa12.74□□□□□ -0.37
NECAP1-215ENST00000639071 DHX29Q7Z478 1369 aaKnown RBP12.74□□□□□ -0.37
NECAP1-215ENST00000639071 PRG4Q92954 1404 aaPredicted RBP12.73□□□□□ -0.37
NECAP1-215ENST00000639071 CCDC136Q96JN2 1154 aa12.73□□□□□ -0.37
NECAP1-215ENST00000639071 PAK3O75914 559 aaPredicted RBP12.73□□□□□ -0.37
NECAP1-215ENST00000639071 KDM2AQ9Y2K7 1162 aa12.73□□□□□ -0.37
NECAP1-215ENST00000639071 PZPP20742 1482 aa12.72□□□□□ -0.37
NECAP1-215ENST00000639071 NUP153P49790 1475 aaKnown RBP12.72□□□□□ -0.37
NECAP1-215ENST00000639071 BCORL1Q5H9F3 1711 aa12.72□□□□□ -0.37
NECAP1-215ENST00000639071 NUDCQ9Y266 331 aa12.72□□□□□ -0.37
NECAP1-215ENST00000639071 SALL2Q9Y467 1007 aaPredicted RBP12.72□□□□□ -0.37
NECAP1-215ENST00000639071 ZNF608Q9ULD9 1512 aaPredicted RBP12.71□□□□□ -0.37
NECAP1-215ENST00000639071 TMC1Q8TDI8 760 aa12.71□□□□□ -0.38
NECAP1-215ENST00000639071 SMG6Q86US8 1419 aaKnown RBP12.7□□□□□ -0.38
NECAP1-215ENST00000639071 DISP1Q96F81 1524 aa12.69□□□□□ -0.38
NECAP1-215ENST00000639071 POLR1AO95602 1720 aaPredicted RBP12.69□□□□□ -0.38
NECAP1-215ENST00000639071 NOP58Q9Y2X3 529 aaKnown RBP12.69□□□□□ -0.38
NECAP1-215ENST00000639071 CAMSAP2Q08AD1 1489 aa12.69□□□□□ -0.38
NECAP1-215ENST00000639071 CARD11Q9BXL7 1154 aa12.69□□□□□ -0.38
NECAP1-215ENST00000639071 KIAA0556O60303 1618 aa12.68□□□□□ -0.38
NECAP1-215ENST00000639071 FBLN2P98095 1184 aa12.68□□□□□ -0.38
NECAP1-215ENST00000639071 MRC2Q9UBG0 1479 aa12.67□□□□□ -0.38
NECAP1-215ENST00000639071 DEKP35659 375 aaKnown RBP12.67□□□□□ -0.38
NECAP1-215ENST00000639071 PNISRQ8TF01 805 aaKnown RBP12.67□□□□□ -0.38
NECAP1-215ENST00000639071 KIAA1107Q9UPP5 1409 aa12.67□□□□□ -0.38
NECAP1-215ENST00000639071 RAPGEF6Q8TEU7 1601 aa12.67□□□□□ -0.38
NECAP1-215ENST00000639071 PLB1Q6P1J6 1458 aa12.66□□□□□ -0.38
NECAP1-215ENST00000639071 ST20-MTHFSA0A0A6YYL1 179 aa12.66□□□□□ -0.38
NECAP1-215ENST00000639071 MBD5Q9P267 1494 aa12.65□□□□□ -0.38
NECAP1-215ENST00000639071 KIF14Q15058 1648 aa12.65□□□□□ -0.39
NECAP1-215ENST00000639071 NUP155O75694 1391 aa12.64□□□□□ -0.39
NECAP1-215ENST00000639071 DCAF11Q8TEB1 546 aa12.64□□□□□ -0.39
NECAP1-215ENST00000639071 KIAA0586Q9BVV6 1533 aa12.63□□□□□ -0.39
NECAP1-215ENST00000639071 TROQ12816 1431 aaPredicted RBP12.63□□□□□ -0.39
NECAP1-215ENST00000639071 GPATCH8Q9UKJ3 1502 aaKnown RBP12.63□□□□□ -0.39
NECAP1-215ENST00000639071 KDM5CP41229 1560 aa12.63□□□□□ -0.39
NECAP1-215ENST00000639071 NPM2Q86SE8 214 aaKnown RBP12.63□□□□□ -0.39
NECAP1-215ENST00000639071 ANKRD50Q9ULJ7 1429 aa12.62□□□□□ -0.39
NECAP1-215ENST00000639071 ANKRD30AQ9BXX3 1397 aa12.62□□□□□ -0.39
NECAP1-215ENST00000639071 RNF123Q5XPI4 1314 aa12.62□□□□□ -0.39
NECAP1-215ENST00000639071 ANP32AP39687 249 aaKnown RBP12.62□□□□□ -0.39
NECAP1-215ENST00000639071 EXOC6Q8TAG9 804 aa12.6□□□□□ -0.39
NECAP1-215ENST00000639071 CHMP7Q8WUX9 453 aaPredicted RBP12.6□□□□□ -0.39
NECAP1-215ENST00000639071 ADGBQ8N7X0 1667 aa12.6□□□□□ -0.39
NECAP1-215ENST00000639071 KIF15Q9NS87 1388 aa12.59□□□□□ -0.39
NECAP1-215ENST00000639071 GRIN2AQ12879 1464 aa12.59□□□□□ -0.39
NECAP1-215ENST00000639071 IPO9Q96P70 1041 aaKnown RBP12.59□□□□□ -0.39
NECAP1-215ENST00000639071 HNRNPMP52272 730 aaKnown RBP eCLIP12.58□□□□□ -0.4
NECAP1-215ENST00000639071 RGL3Q3MIN7 710 aa12.58□□□□□ -0.4
NECAP1-215ENST00000639071 ZBTB47Q9UFB7 747 aaPredicted RBP12.58□□□□□ -0.4
NECAP1-215ENST00000639071 MYBBP1AQ9BQG0 1328 aaKnown RBP12.57□□□□□ -0.4
NECAP1-215ENST00000639071 ITSN2Q9NZM3 1697 aa12.57□□□□□ -0.4
NECAP1-215ENST00000639071 RRP1P56182 461 aaKnown RBP12.57□□□□□ -0.4
NECAP1-215ENST00000639071 RALGAPBQ86X10 1494 aa12.57□□□□□ -0.4
NECAP1-215ENST00000639071 IFT140Q96RY7 1462 aa12.56□□□□□ -0.4
NECAP1-215ENST00000639071 ROCK2O75116 1388 aaKnown RBP12.56□□□□□ -0.4
NECAP1-215ENST00000639071 ARID4BQ4LE39 1312 aaPredicted RBP12.56□□□□□ -0.4
NECAP1-215ENST00000639071 TSPY4P0CV99 314 aa12.56□□□□□ -0.4
NECAP1-215ENST00000639071 TSPY10P0CW01 314 aa12.56□□□□□ -0.4
NECAP1-215ENST00000639071 SKAP1Q86WV1 359 aa12.56□□□□□ -0.4
NECAP1-215ENST00000639071 CDCA7LQ96GN5 454 aa12.56□□□□□ -0.4
NECAP1-215ENST00000639071 CROCC2H7BZ55 1655 aa12.55□□□□□ -0.4
NECAP1-215ENST00000639071 ADGRL2O95490 1459 aa12.55□□□□□ -0.4
NECAP1-215ENST00000639071 PLEKHD1A6NEE1 506 aa12.55□□□□□ -0.4
NECAP1-215ENST00000639071 RCAN3Q9UKA8 241 aa12.55□□□□□ -0.4
NECAP1-215ENST00000639071 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
NECAP1-215ENST00000639071 PLIN1O60240 522 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms