RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 TMEM121BQ9BXQ6 578 aaPredicted RBP14.26□□□□□ -0.13
FAM49B-230ENST00000639004 COLQQ9Y215 455 aaPredicted RBP14.26□□□□□ -0.13
FAM49B-230ENST00000639004 BOLA1Q9Y3E2 137 aa14.26□□□□□ -0.13
FAM49B-230ENST00000639004 SEC24BO95487 1268 aa14.24□□□□□ -0.13
FAM49B-230ENST00000639004 GPHNQ9NQX3 736 aaPredicted RBP14.23□□□□□ -0.13
FAM49B-230ENST00000639004 POTEFA5A3E0 1075 aa14.22□□□□□ -0.13
FAM49B-230ENST00000639004 C7P10643 843 aa14.21□□□□□ -0.13
FAM49B-230ENST00000639004 G3V3G9 751 aa14.2□□□□□ -0.14
FAM49B-230ENST00000639004 ARHGEF1Q92888 912 aaKnown RBP14.2□□□□□ -0.14
FAM49B-230ENST00000639004 L3MBTL3Q96JM7 780 aaPredicted RBP14.2□□□□□ -0.14
FAM49B-230ENST00000639004 METRNQ9UJH8 293 aa14.19□□□□□ -0.14
FAM49B-230ENST00000639004 PRKCSHP14314 528 aaPredicted RBP14.18□□□□□ -0.14
FAM49B-230ENST00000639004 PPP1R15BQ5SWA1 713 aa14.18□□□□□ -0.14
FAM49B-230ENST00000639004 CAMK2BQ13554 666 aa14.17□□□□□ -0.14
FAM49B-230ENST00000639004 TPRNQ4KMQ1 711 aa14.15□□□□□ -0.14
FAM49B-230ENST00000639004 TMC2Q8TDI7 906 aa14.15□□□□□ -0.14
FAM49B-230ENST00000639004 DSG2Q14126 1118 aa14.14□□□□□ -0.15
FAM49B-230ENST00000639004 KIF3CO14782 793 aa14.12□□□□□ -0.15
FAM49B-230ENST00000639004 C2orf72A6NCS6 295 aa14.11□□□□□ -0.15
FAM49B-230ENST00000639004 FOXK1P85037 733 aa14.11□□□□□ -0.15
FAM49B-230ENST00000639004 ARIH1Q9Y4X5 557 aaPredicted RBP14.11□□□□□ -0.15
FAM49B-230ENST00000639004 TMEM92Q6UXU6 159 aa14.09□□□□□ -0.15
FAM49B-230ENST00000639004 PLPP6Q8IY26 295 aa14.05□□□□□ -0.16
FAM49B-230ENST00000639004 EMILIN3Q9NT22 766 aa14.04□□□□□ -0.16
FAM49B-230ENST00000639004 SEMA3EO15041 775 aa14.03□□□□□ -0.16
FAM49B-230ENST00000639004 TESPA1A2RU30 521 aaPredicted RBP14□□□□□ -0.17
FAM49B-230ENST00000639004 C3orf67Q6ZVT6 689 aa13.99□□□□□ -0.17
FAM49B-230ENST00000639004 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.98□□□□□ -0.17
FAM49B-230ENST00000639004 DPYSL4O14531 572 aa13.97□□□□□ -0.17
FAM49B-230ENST00000639004 LMOD2Q6P5Q4 547 aa13.96□□□□□ -0.17
FAM49B-230ENST00000639004 TULP1O00294 542 aaPredicted RBP13.93□□□□□ -0.18
FAM49B-230ENST00000639004 PDIA6Q15084 440 aa13.9□□□□□ -0.18
FAM49B-230ENST00000639004 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.9□□□□□ -0.18
FAM49B-230ENST00000639004 SPDYE16A6NNV3 312 aaPredicted RBP13.89□□□□□ -0.19
FAM49B-230ENST00000639004 UPF1Q92900 1129 aaKnown RBP eCLIP13.88□□□□□ -0.19
FAM49B-230ENST00000639004 MLLT3P42568 568 aaPredicted RBP13.87□□□□□ -0.19
FAM49B-230ENST00000639004 OXER1Q8TDS5 423 aa13.87□□□□□ -0.19
FAM49B-230ENST00000639004 MAP3K9P80192 1104 aa13.86□□□□□ -0.19
FAM49B-230ENST00000639004 SMYD5Q6GMV2 418 aa13.86□□□□□ -0.19
FAM49B-230ENST00000639004 POTEJP0CG39 1038 aa13.85□□□□□ -0.19
FAM49B-230ENST00000639004 POTEB2H3BUK9 544 aa13.84□□□□□ -0.19
FAM49B-230ENST00000639004 PTCD2Q8WV60 388 aaKnown RBP13.79□□□□□ -0.2
FAM49B-230ENST00000639004 SLC34A2O95436 690 aa13.78□□□□□ -0.2
FAM49B-230ENST00000639004 ZC3H15Q8WU90 426 aaKnown RBP13.77□□□□□ -0.21
FAM49B-230ENST00000639004 PLSCR2Q9NRY7 297 aa13.77□□□□□ -0.21
FAM49B-230ENST00000639004 TBC1D12O60347 775 aa13.75□□□□□ -0.21
FAM49B-230ENST00000639004 RBM26Q5T8P6 1007 aaKnown RBP13.75□□□□□ -0.21
FAM49B-230ENST00000639004 EVI5O60447 810 aa13.73□□□□□ -0.21
FAM49B-230ENST00000639004 PTGER2P43116 358 aa13.71□□□□□ -0.21
FAM49B-230ENST00000639004 GRXCR2A6NFK2 248 aa13.7□□□□□ -0.22
FAM49B-230ENST00000639004 MAMSTRQ6ZN01 415 aa13.69□□□□□ -0.22
FAM49B-230ENST00000639004 SLAIN1Q8ND83 568 aa13.69□□□□□ -0.22
FAM49B-230ENST00000639004 SCUBE2Q9NQ36 999 aa13.69□□□□□ -0.22
FAM49B-230ENST00000639004 GPIHBP1Q8IV16 184 aa13.67□□□□□ -0.22
FAM49B-230ENST00000639004 DDX12PQ92771 950 aa13.67□□□□□ -0.22
FAM49B-230ENST00000639004 PCDHGA4Q9Y5G9 962 aa13.67□□□□□ -0.22
FAM49B-230ENST00000639004 ZNF316A6NFI3 1004 aaPredicted RBP13.66□□□□□ -0.22
FAM49B-230ENST00000639004 ANO8Q9HCE9 1232 aaPredicted RBP13.66□□□□□ -0.22
FAM49B-230ENST00000639004 ZMYND10O75800 440 aa13.64□□□□□ -0.23
FAM49B-230ENST00000639004 OSBPP22059 807 aa13.64□□□□□ -0.23
FAM49B-230ENST00000639004 HOXB3P14651 431 aaPredicted RBP13.63□□□□□ -0.23
FAM49B-230ENST00000639004 OTUD5Q96G74 571 aa13.63□□□□□ -0.23
FAM49B-230ENST00000639004 KDM4FA0A1W2PPD8 638 aa13.6□□□□□ -0.23
FAM49B-230ENST00000639004 DOK7Q18PE1 504 aa13.6□□□□□ -0.23
FAM49B-230ENST00000639004 BARGINQ6ZT62 677 aa13.59□□□□□ -0.23
FAM49B-230ENST00000639004 GPR37O15354 613 aa13.58□□□□□ -0.24
FAM49B-230ENST00000639004 PRIM1P49642 420 aaKnown RBP13.58□□□□□ -0.24
FAM49B-230ENST00000639004 SLC24A3Q9HC58 644 aa13.58□□□□□ -0.24
FAM49B-230ENST00000639004 NUTM2FA1L443 756 aa13.55□□□□□ -0.24
FAM49B-230ENST00000639004 PHF14O94880 888 aa13.54□□□□□ -0.24
FAM49B-230ENST00000639004 ARSIQ5FYB1 569 aa13.54□□□□□ -0.24
FAM49B-230ENST00000639004 KHSRPQ92945 711 aaKnown RBP eCLIP13.54□□□□□ -0.242e-6■□□□□ 10.5
FAM49B-230ENST00000639004 RIMBP2O15034 1052 aa13.53□□□□□ -0.24
FAM49B-230ENST00000639004 ZSWIM6Q9HCJ5 1215 aa13.53□□□□□ -0.24
FAM49B-230ENST00000639004 NUDT7P0C024 238 aa13.52□□□□□ -0.25
FAM49B-230ENST00000639004 GPR153Q6NV75 609 aa13.52□□□□□ -0.25
FAM49B-230ENST00000639004 EPAS1Q99814 870 aa13.52□□□□□ -0.25
FAM49B-230ENST00000639004 PCDHGA10Q9Y5H3 936 aa13.52□□□□□ -0.25
FAM49B-230ENST00000639004 EN1Q05925 392 aaPredicted RBP13.5□□□□□ -0.25
FAM49B-230ENST00000639004 ZNF710Q8N1W2 664 aa13.5□□□□□ -0.25
FAM49B-230ENST00000639004 JPH4Q96JJ6 628 aa13.5□□□□□ -0.25
FAM49B-230ENST00000639004 POTEMA6NI47 508 aa13.47□□□□□ -0.25
FAM49B-230ENST00000639004 FOSBP53539 338 aa13.47□□□□□ -0.25
FAM49B-230ENST00000639004 TYW1BQ6NUM6 668 aa13.47□□□□□ -0.25
FAM49B-230ENST00000639004 KRI1Q8N9T8 703 aaKnown RBP13.46□□□□□ -0.25
FAM49B-230ENST00000639004 SNPHO15079 494 aa13.45□□□□□ -0.26
FAM49B-230ENST00000639004 FCHSD2O94868 740 aa13.45□□□□□ -0.26
FAM49B-230ENST00000639004 RBM33Q96EV2 1170 aaKnown RBP13.45□□□□□ -0.26
FAM49B-230ENST00000639004 CDHR5Q9HBB8 845 aa13.45□□□□□ -0.26
FAM49B-230ENST00000639004 MAP3K7O43318 606 aa13.44□□□□□ -0.26
FAM49B-230ENST00000639004 PTGDRQ13258 359 aa13.44□□□□□ -0.26
FAM49B-230ENST00000639004 HIC1Q14526 733 aa13.44□□□□□ -0.26
FAM49B-230ENST00000639004 AK7Q96M32 723 aa13.44□□□□□ -0.26
FAM49B-230ENST00000639004 GNPATO15228 680 aa13.43□□□□□ -0.26
FAM49B-230ENST00000639004 FBXW7Q969H0 707 aa13.43□□□□□ -0.26
FAM49B-230ENST00000639004 BRPF1P55201 1214 aaPredicted RBP13.42□□□□□ -0.26
FAM49B-230ENST00000639004 POTEGQ6S5H5 508 aa13.42□□□□□ -0.26
FAM49B-230ENST00000639004 ZNF454Q8N9F8 522 aa13.42□□□□□ -0.26
FAM49B-230ENST00000639004 TSR1Q2NL82 804 aaKnown RBP13.41□□□□□ -0.26
FAM49B-230ENST00000639004 FECHP22830 423 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms