RNA–Protein interactions for RNA: ENST00000634772.1

SMARCA2-228, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 810 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-228ENST00000634772 RANGAP1P46060 587 aaPredicted RBP15.49■□□□□ 0.07
SMARCA2-228ENST00000634772 RIMS1Q86UR5 1692 aaKnown RBP15.48■□□□□ 0.07
SMARCA2-228ENST00000634772 FANCAO15360 1455 aa15.47■□□□□ 0.07
SMARCA2-228ENST00000634772 SOCS7O14512 581 aa15.47■□□□□ 0.07
SMARCA2-228ENST00000634772 CACNB1Q02641 598 aaPredicted RBP15.47■□□□□ 0.07
SMARCA2-228ENST00000634772 TTC37Q6PGP7 1564 aa15.47■□□□□ 0.07
SMARCA2-228ENST00000634772 YEATS2Q9ULM3 1422 aa15.47■□□□□ 0.07
SMARCA2-228ENST00000634772 CEP162Q5TB80 1403 aa15.46■□□□□ 0.07
SMARCA2-228ENST00000634772 ZMYM4Q5VZL5 1548 aa15.46■□□□□ 0.07
SMARCA2-228ENST00000634772 PLEKHD1A6NEE1 506 aa15.45■□□□□ 0.06
SMARCA2-228ENST00000634772 HSPA2P54652 639 aa15.45■□□□□ 0.06
SMARCA2-228ENST00000634772 CDK13Q14004 1512 aaKnown RBP15.43■□□□□ 0.06
SMARCA2-228ENST00000634772 ZFYVE16Q7Z3T8 1539 aa15.43■□□□□ 0.06
SMARCA2-228ENST00000634772 CLIP1P30622 1438 aa15.42■□□□□ 0.06
SMARCA2-228ENST00000634772 CFAP74Q9C0B2 1584 aa15.41■□□□□ 0.06
SMARCA2-228ENST00000634772 HECW1Q76N89 1606 aa15.41■□□□□ 0.06
SMARCA2-228ENST00000634772 EFCAB5A4FU69 1503 aa15.4■□□□□ 0.06
SMARCA2-228ENST00000634772 MAGI2Q86UL8 1455 aa15.39■□□□□ 0.05
SMARCA2-228ENST00000634772 POGZQ7Z3K3 1410 aa15.38■□□□□ 0.05
SMARCA2-228ENST00000634772 MLECQ14165 292 aa15.38■□□□□ 0.05
SMARCA2-228ENST00000634772 PLCH2O75038 1416 aa15.37■□□□□ 0.05
SMARCA2-228ENST00000634772 SCAPERQ9BY12 1400 aa15.37■□□□□ 0.05
SMARCA2-228ENST00000634772 ARHGEF12Q9NZN5 1544 aa15.35■□□□□ 0.05
SMARCA2-228ENST00000634772 ILDR2Q71H61 639 aa15.35■□□□□ 0.05
SMARCA2-228ENST00000634772 HOXD11P31277 338 aaPredicted RBP15.33■□□□□ 0.04
SMARCA2-228ENST00000634772 FER1L4A9Z1Z3 1794 aa15.33■□□□□ 0.04
SMARCA2-228ENST00000634772 CERKQ8TCT0 537 aa15.32■□□□□ 0.04
SMARCA2-228ENST00000634772 ATP10AO60312 1499 aa15.32■□□□□ 0.04
SMARCA2-228ENST00000634772 C9orf84Q5VXU9 1444 aa15.31■□□□□ 0.04
SMARCA2-228ENST00000634772 CEBPAP49715 358 aaPredicted RBP15.3■□□□□ 0.04
SMARCA2-228ENST00000634772 KIF14Q15058 1648 aa15.29■□□□□ 0.04
SMARCA2-228ENST00000634772 ARHGAP35Q9NRY4 1499 aa15.29■□□□□ 0.04
SMARCA2-228ENST00000634772 EFCAB2Q5VUJ9 269 aa15.27■□□□□ 0.04
SMARCA2-228ENST00000634772 CNKSR2Q8WXI2 1034 aa15.27■□□□□ 0.04
SMARCA2-228ENST00000634772 KDM5CP41229 1560 aa15.26■□□□□ 0.03
SMARCA2-228ENST00000634772 MYO5CQ9NQX4 1742 aa15.26■□□□□ 0.03
SMARCA2-228ENST00000634772 VPS8Q8N3P4 1428 aa15.26■□□□□ 0.03
SMARCA2-228ENST00000634772 PREX1Q8TCU6 1659 aa15.25■□□□□ 0.03
SMARCA2-228ENST00000634772 AFAP1Q8N556 730 aa15.25■□□□□ 0.03
SMARCA2-228ENST00000634772 FMN1Q68DA7 1419 aa15.25■□□□□ 0.03
SMARCA2-228ENST00000634772 ATP1B4Q9UN42 357 aaPredicted RBP15.24■□□□□ 0.03
SMARCA2-228ENST00000634772 ZNF518AQ6AHZ1 1483 aa15.24■□□□□ 0.03
SMARCA2-228ENST00000634772 TROQ12816 1431 aaPredicted RBP15.24■□□□□ 0.03
SMARCA2-228ENST00000634772 STRCQ7RTU9 1775 aa15.23■□□□□ 0.03
SMARCA2-228ENST00000634772 DIP2CQ9Y2E4 1556 aa15.23■□□□□ 0.03
SMARCA2-228ENST00000634772 ARHGAP5Q13017 1502 aa15.22■□□□□ 0.03
SMARCA2-228ENST00000634772 LRRIQ1Q96JM4 1722 aa15.21■□□□□ 0.03
SMARCA2-228ENST00000634772 ABCA6Q8N139 1617 aa15.21■□□□□ 0.02
SMARCA2-228ENST00000634772 REREQ9P2R6 1566 aa15.2■□□□□ 0.02
SMARCA2-228ENST00000634772 UHRF1BP1Q6BDS2 1440 aa15.19■□□□□ 0.02
SMARCA2-228ENST00000634772 APLP2Q06481 763 aa15.19■□□□□ 0.02
SMARCA2-228ENST00000634772 TRAPPC8Q9Y2L5 1435 aa15.18■□□□□ 0.02
SMARCA2-228ENST00000634772 RNF216Q9NWF9 866 aaPredicted RBP15.18■□□□□ 0.02
SMARCA2-228ENST00000634772 CDK11AQ9UQ88 783 aaPredicted RBP15.18■□□□□ 0.02
SMARCA2-228ENST00000634772 DISP3Q9P2K9 1392 aa15.18■□□□□ 0.02
SMARCA2-228ENST00000634772 MLH3Q9UHC1 1453 aa15.18■□□□□ 0.02
SMARCA2-228ENST00000634772 CDC42BPBQ9Y5S2 1711 aa15.17■□□□□ 0.02
SMARCA2-228ENST00000634772 ABCC1P33527 1531 aa15.16■□□□□ 0.02
SMARCA2-228ENST00000634772 AGLP35573 1532 aa15.16■□□□□ 0.02
SMARCA2-228ENST00000634772 C3P01024 1663 aa15.16■□□□□ 0.02
SMARCA2-228ENST00000634772 RNF39Q9H2S5 420 aa15.15■□□□□ 0.02
SMARCA2-228ENST00000634772 PTPRTO14522 1441 aa15.14■□□□□ 0.01
SMARCA2-228ENST00000634772 PREX2Q70Z35 1606 aa15.14■□□□□ 0.01
SMARCA2-228ENST00000634772 MYT1LQ9UL68 1186 aa15.13■□□□□ 0.01
SMARCA2-228ENST00000634772 LTBP4Q8N2S1 1624 aa15.12■□□□□ 0.01
SMARCA2-228ENST00000634772 ITSN2Q9NZM3 1697 aa15.12■□□□□ 0.01
SMARCA2-228ENST00000634772 KIDINS220Q9ULH0 1771 aa15.11■□□□□ 0.01
SMARCA2-228ENST00000634772 CASKIN1Q8WXD9 1431 aa15.11■□□□□ 0.01
SMARCA2-228ENST00000634772 NCOA1Q15788 1441 aa15.09■□□□□ 0.01
SMARCA2-228ENST00000634772 SETD1BQ9UPS6 1966 aaKnown RBP15.09■□□□□ 0.01
SMARCA2-228ENST00000634772 MAP3K1Q13233 1512 aa15.08■□□□□ 0.01
SMARCA2-228ENST00000634772 CCDC18Q5T9S5 1454 aa15.07■□□□□ 0
SMARCA2-228ENST00000634772 SAMD9LQ8IVG5 1584 aa15.07■□□□□ 0
SMARCA2-228ENST00000634772 CDC42BPAQ5VT25 1732 aa15.06■□□□□ 0
SMARCA2-228ENST00000634772 TRIM26Q12899 539 aaPredicted RBP15.06■□□□□ 0
SMARCA2-228ENST00000634772 CNTLNQ9NXG0 1405 aa15.06■□□□□ 0
SMARCA2-228ENST00000634772 FYCO1Q9BQS8 1478 aa15.05■□□□□ -0
SMARCA2-228ENST00000634772 PPARGC1BQ86YN6 1023 aaKnown RBP15.04■□□□□ -0
SMARCA2-228ENST00000634772 SPATA31D1Q6ZQQ2 1576 aa15.03■□□□□ -0
SMARCA2-228ENST00000634772 SYCP2Q9BX26 1530 aa15.03■□□□□ -0
SMARCA2-228ENST00000634772 NPATQ14207 1427 aa15.03■□□□□ -0
SMARCA2-228ENST00000634772 KANK4Q5T7N3 995 aaPredicted RBP15.03■□□□□ -0
SMARCA2-228ENST00000634772 ESF1Q9H501 851 aaKnown RBP15.03■□□□□ -0
SMARCA2-228ENST00000634772 CAMSAP1Q5T5Y3 1602 aa15.03■□□□□ -0
SMARCA2-228ENST00000634772 GPATCH8Q9UKJ3 1502 aaKnown RBP15.02■□□□□ -0
SMARCA2-228ENST00000634772 IQSEC2Q5JU85 1478 aa15.02■□□□□ -0
SMARCA2-228ENST00000634772 ZMYM3Q14202 1370 aa15.02■□□□□ -0
SMARCA2-228ENST00000634772 MROH2AA6NES4 1674 aa15.01□□□□□ -0.01
SMARCA2-228ENST00000634772 HNRNPMP52272 730 aaKnown RBP eCLIP15.01□□□□□ -0.01
SMARCA2-228ENST00000634772 ZNF777Q9ULD5 760 aaPredicted RBP15.01□□□□□ -0.01
SMARCA2-228ENST00000634772 NCKAP5LQ9HCH0 1330 aa15□□□□□ -0.01
SMARCA2-228ENST00000634772 PLXNC1O60486 1568 aa15□□□□□ -0.01
SMARCA2-228ENST00000634772 SPAG9O60271 1321 aaKnown RBP14.99□□□□□ -0.01
SMARCA2-228ENST00000634772 ZNF335Q9H4Z2 1342 aaPredicted RBP14.98□□□□□ -0.01
SMARCA2-228ENST00000634772 ATP7AQ04656 1500 aa14.98□□□□□ -0.01
SMARCA2-228ENST00000634772 PTPRKQ15262 1439 aa14.98□□□□□ -0.01
SMARCA2-228ENST00000634772 INO80Q9ULG1 1556 aaPredicted RBP14.98□□□□□ -0.01
SMARCA2-228ENST00000634772 SUPT6HQ7KZ85 1726 aaKnown RBP14.97□□□□□ -0.01
SMARCA2-228ENST00000634772 KIAA1107Q9UPP5 1409 aa14.97□□□□□ -0.01
SMARCA2-228ENST00000634772 A2MP01023 1474 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms