RNA–Protein interactions for RNA: ENST00000634308.1

ATP7B-211, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best)

Gene ATP7B, Length 4,321 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-211ENST00000634308 PPM1GO15355 546 aaPredicted RBP12.73□□□□□ -0.37
ATP7B-211ENST00000634308 CFTRP13569 1480 aa12.73□□□□□ -0.37
ATP7B-211ENST00000634308 SYNJ1O43426 1573 aa12.71□□□□□ -0.37
ATP7B-211ENST00000634308 UPF2Q9HAU5 1272 aaKnown RBP12.71□□□□□ -0.37
ATP7B-211ENST00000634308 ARAP1Q96P48 1450 aa12.71□□□□□ -0.37
ATP7B-211ENST00000634308 FMN1Q68DA7 1419 aa12.7□□□□□ -0.38
ATP7B-211ENST00000634308 DDRGK1Q96HY6 314 aa12.7□□□□□ -0.38
ATP7B-211ENST00000634308 FGD5Q6ZNL6 1462 aa12.7□□□□□ -0.38
ATP7B-211ENST00000634308 PHLDB1Q86UU1 1377 aa12.69□□□□□ -0.38
ATP7B-211ENST00000634308 PLEKHG5O94827 1062 aa12.69□□□□□ -0.38
ATP7B-211ENST00000634308 CC2D1BQ5T0F9 858 aaKnown RBP12.69□□□□□ -0.38
ATP7B-211ENST00000634308 IPO9Q96P70 1041 aaKnown RBP12.69□□□□□ -0.38
ATP7B-211ENST00000634308 DCAF11Q8TEB1 546 aa12.68□□□□□ -0.38
ATP7B-211ENST00000634308 PRKRIP1Q9H875 184 aaPredicted RBP12.68□□□□□ -0.38
ATP7B-211ENST00000634308 IL27Q8NEV9 243 aa12.68□□□□□ -0.38
ATP7B-211ENST00000634308 PRG4Q92954 1404 aaPredicted RBP12.67□□□□□ -0.38
ATP7B-211ENST00000634308 RGS3P49796 1198 aa12.67□□□□□ -0.38
ATP7B-211ENST00000634308 PHF23Q9BUL5 403 aaPredicted RBP12.67□□□□□ -0.38
ATP7B-211ENST00000634308 RRBP1Q9P2E9 1410 aaKnown RBP12.67□□□□□ -0.38
ATP7B-211ENST00000634308 PKD2Q13563 968 aa12.66□□□□□ -0.38
ATP7B-211ENST00000634308 A0A0G2JS52 829 aa12.66□□□□□ -0.38
ATP7B-211ENST00000634308 IGF1RP08069 1367 aa12.66□□□□□ -0.38
ATP7B-211ENST00000634308 NUDCQ9Y266 331 aa12.66□□□□□ -0.38
ATP7B-211ENST00000634308 CCDC18Q5T9S5 1454 aa12.64□□□□□ -0.39
ATP7B-211ENST00000634308 HDGFP51858 240 aaKnown RBP12.64□□□□□ -0.39
ATP7B-211ENST00000634308 TOPBP1Q92547 1522 aa12.63□□□□□ -0.39
ATP7B-211ENST00000634308 KNSTRNQ9Y448 316 aa12.63□□□□□ -0.39
ATP7B-211ENST00000634308 SNAPC4Q5SXM2 1469 aa12.63□□□□□ -0.39
ATP7B-211ENST00000634308 HSP90AA1P07900 732 aaKnown RBP12.63□□□□□ -0.39
ATP7B-211ENST00000634308 RCAN3Q9UKA8 241 aa12.62□□□□□ -0.39
ATP7B-211ENST00000634308 UBE2Q2Q8WVN8 375 aa12.61□□□□□ -0.39
ATP7B-211ENST00000634308 LRRC9Q6ZRR7 1453 aa12.6□□□□□ -0.39
ATP7B-211ENST00000634308 UNC13AQ9UPW8 1703 aa12.6□□□□□ -0.39
ATP7B-211ENST00000634308 ZBED9Q6R2W3 1325 aa12.6□□□□□ -0.39
ATP7B-211ENST00000634308 NEUROD2Q15784 382 aa12.59□□□□□ -0.39
ATP7B-211ENST00000634308 PRXQ9BXM0 1461 aa12.59□□□□□ -0.39
ATP7B-211ENST00000634308 USP35Q9P2H5 1018 aa12.58□□□□□ -0.39
ATP7B-211ENST00000634308 WASHC2AQ641Q2 1341 aa12.58□□□□□ -0.39
ATP7B-211ENST00000634308 PKNOX2Q96KN3 472 aa12.58□□□□□ -0.4
ATP7B-211ENST00000634308 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
ATP7B-211ENST00000634308 NAP1L5Q96NT1 182 aaPredicted RBP12.57□□□□□ -0.4
ATP7B-211ENST00000634308 RSPH6AQ9H0K4 717 aa12.57□□□□□ -0.4
ATP7B-211ENST00000634308 BECN1Q14457 450 aa12.57□□□□□ -0.4
ATP7B-211ENST00000634308 LMOD2Q6P5Q4 547 aa12.57□□□□□ -0.4
ATP7B-211ENST00000634308 EID1Q9Y6B2 187 aa12.57□□□□□ -0.4
ATP7B-211ENST00000634308 WDR97A6NE52 1622 aa12.56□□□□□ -0.4
ATP7B-211ENST00000634308 TCERG1O14776 1098 aaKnown RBP12.56□□□□□ -0.4
ATP7B-211ENST00000634308 ERICH3Q5RHP9 1530 aa12.56□□□□□ -0.4
ATP7B-211ENST00000634308 FGD6Q6ZV73 1430 aa12.56□□□□□ -0.4
ATP7B-211ENST00000634308 VSIG10Q8N0Z9 540 aa12.54□□□□□ -0.4
ATP7B-211ENST00000634308 POLA1P09884 1462 aaPredicted RBP12.54□□□□□ -0.4
ATP7B-211ENST00000634308 FRAT1Q92837 279 aaPredicted RBP12.54□□□□□ -0.4
ATP7B-211ENST00000634308 UACAQ9BZF9 1416 aa12.54□□□□□ -0.4
ATP7B-211ENST00000634308 ZNF608Q9ULD9 1512 aaPredicted RBP12.54□□□□□ -0.4
ATP7B-211ENST00000634308 NUP155O75694 1391 aa12.54□□□□□ -0.4
ATP7B-211ENST00000634308 RALBP1Q15311 655 aa12.53□□□□□ -0.4
ATP7B-211ENST00000634308 KTN1Q86UP2 1357 aaKnown RBP12.53□□□□□ -0.4
ATP7B-211ENST00000634308 TMF1P82094 1093 aa12.53□□□□□ -0.4
ATP7B-211ENST00000634308 SPAG9O60271 1321 aaKnown RBP12.53□□□□□ -0.4
ATP7B-211ENST00000634308 CCDC184Q52MB2 194 aa12.53□□□□□ -0.4
ATP7B-211ENST00000634308 ST20-MTHFSA0A0A6YYL1 179 aa12.52□□□□□ -0.41
ATP7B-211ENST00000634308 CDCA8Q53HL2 280 aa12.52□□□□□ -0.41
ATP7B-211ENST00000634308 EXOC6Q8TAG9 804 aa12.52□□□□□ -0.41
ATP7B-211ENST00000634308 CCDC7Q96M83 1385 aa12.52□□□□□ -0.41
ATP7B-211ENST00000634308 TNNT2P45379 298 aaPredicted RBP12.51□□□□□ -0.41
ATP7B-211ENST00000634308 ANP32BQ92688 251 aaKnown RBP12.51□□□□□ -0.41
ATP7B-211ENST00000634308 KIF7Q2M1P5 1343 aa12.51□□□□□ -0.41
ATP7B-211ENST00000634308 KIF3BO15066 747 aa12.51□□□□□ -0.41
ATP7B-211ENST00000634308 NLRP13Q86W25 1043 aa12.5□□□□□ -0.41
ATP7B-211ENST00000634308 ROCK2O75116 1388 aaKnown RBP12.5□□□□□ -0.41
ATP7B-211ENST00000634308 SLC24A1O60721 1099 aa12.5□□□□□ -0.41
ATP7B-211ENST00000634308 DMRT2Q9Y5R5 561 aa12.5□□□□□ -0.41
ATP7B-211ENST00000634308 PLIN1O60240 522 aa12.5□□□□□ -0.41
ATP7B-211ENST00000634308 GSE1Q14687 1217 aa12.5□□□□□ -0.41
ATP7B-211ENST00000634308 WASHC2CQ9Y4E1 1318 aa12.49□□□□□ -0.41
ATP7B-211ENST00000634308 PDE4AP27815 886 aa12.49□□□□□ -0.41
ATP7B-211ENST00000634308 SYNJ2O15056 1496 aa12.49□□□□□ -0.41
ATP7B-211ENST00000634308 MEX3CQ5U5Q3 659 aaKnown RBP12.48□□□□□ -0.41
ATP7B-211ENST00000634308 POGZQ7Z3K3 1410 aa12.48□□□□□ -0.41
ATP7B-211ENST00000634308 TOP2BQ02880 1626 aa12.48□□□□□ -0.41
ATP7B-211ENST00000634308 CNTLNQ9NXG0 1405 aa12.48□□□□□ -0.41
ATP7B-211ENST00000634308 USP47Q96K76 1375 aa12.48□□□□□ -0.41
ATP7B-211ENST00000634308 MYOM3Q5VTT5 1437 aa12.47□□□□□ -0.41
ATP7B-211ENST00000634308 KANK1Q14678 1352 aa12.47□□□□□ -0.41
ATP7B-211ENST00000634308 URB2Q14146 1524 aaKnown RBP12.47□□□□□ -0.41
ATP7B-211ENST00000634308 ZBTB7CA1YPR0 619 aa12.46□□□□□ -0.41
ATP7B-211ENST00000634308 RRP1P56182 461 aaKnown RBP12.46□□□□□ -0.41
ATP7B-211ENST00000634308 BRPF3Q9ULD4 1205 aa12.46□□□□□ -0.41
ATP7B-211ENST00000634308 RAPGEF3O95398 923 aa12.46□□□□□ -0.41
ATP7B-211ENST00000634308 ANKRD30AQ9BXX3 1397 aa12.46□□□□□ -0.41
ATP7B-211ENST00000634308 MAGI1Q96QZ7 1491 aaPredicted RBP12.46□□□□□ -0.42
ATP7B-211ENST00000634308 SLC4A3P48751 1232 aa12.46□□□□□ -0.42
ATP7B-211ENST00000634308 ZNF644Q9H582 1327 aaPredicted RBP12.46□□□□□ -0.42
ATP7B-211ENST00000634308 PIP4K2BP78356 416 aa12.45□□□□□ -0.42
ATP7B-211ENST00000634308 MYBBP1AQ9BQG0 1328 aaKnown RBP12.45□□□□□ -0.42
ATP7B-211ENST00000634308 DNMBPQ6XZF7 1577 aa12.45□□□□□ -0.42
ATP7B-211ENST00000634308 PDE3BQ13370 1112 aa12.44□□□□□ -0.42
ATP7B-211ENST00000634308 FTSJ3Q8IY81 847 aaKnown RBP12.44□□□□□ -0.42
ATP7B-211ENST00000634308 KIF15Q9NS87 1388 aa12.44□□□□□ -0.42
ATP7B-211ENST00000634308 TIAM1Q13009 1591 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms