RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 ADAMTSL3P82987 1691 aa26.6■■□□□ 1.85
LINC00628-201ENST00000628516 POGZQ7Z3K3 1410 aa26.6■■□□□ 1.85
LINC00628-201ENST00000628516 HECW2Q9P2P5 1572 aa26.59■■□□□ 1.85
LINC00628-201ENST00000628516 ZFYVE16Q7Z3T8 1539 aa26.59■■□□□ 1.85
LINC00628-201ENST00000628516 YEATS2Q9ULM3 1422 aa26.58■■□□□ 1.85
LINC00628-201ENST00000628516 FYCO1Q9BQS8 1478 aa26.58■■□□□ 1.85
LINC00628-201ENST00000628516 BCORL1Q5H9F3 1711 aa26.58■■□□□ 1.85
LINC00628-201ENST00000628516 ARHGAP5Q13017 1502 aa26.58■■□□□ 1.85
LINC00628-201ENST00000628516 MAGI2Q86UL8 1455 aa26.57■■□□□ 1.84
LINC00628-201ENST00000628516 PTPRMP28827 1452 aa26.56■■□□□ 1.84
LINC00628-201ENST00000628516 MADDQ8WXG6 1647 aa26.52■■□□□ 1.84
LINC00628-201ENST00000628516 ZNF518AQ6AHZ1 1483 aa26.48■■□□□ 1.83
LINC00628-201ENST00000628516 CDC42BPBQ9Y5S2 1711 aa26.48■■□□□ 1.83
LINC00628-201ENST00000628516 AFAP1Q8N556 730 aa26.47■■□□□ 1.83
LINC00628-201ENST00000628516 SIGLEC1Q9BZZ2 1709 aa26.45■■□□□ 1.83
LINC00628-201ENST00000628516 MLECQ14165 292 aa26.45■■□□□ 1.82
LINC00628-201ENST00000628516 PREX2Q70Z35 1606 aa26.45■■□□□ 1.82
LINC00628-201ENST00000628516 ATP10AO60312 1499 aa26.44■■□□□ 1.82
LINC00628-201ENST00000628516 MYT1LQ9UL68 1186 aa26.44■■□□□ 1.82
LINC00628-201ENST00000628516 RIMS1Q86UR5 1692 aaKnown RBP26.43■■□□□ 1.82
LINC00628-201ENST00000628516 C9orf84Q5VXU9 1444 aa26.42■■□□□ 1.82
LINC00628-201ENST00000628516 KDM5CP41229 1560 aa26.41■■□□□ 1.82
LINC00628-201ENST00000628516 CEP162Q5TB80 1403 aa26.39■■□□□ 1.82
LINC00628-201ENST00000628516 PLPPR3Q6T4P5 718 aa26.39■■□□□ 1.82
LINC00628-201ENST00000628516 CDC42BPAQ5VT25 1732 aa26.39■■□□□ 1.81
LINC00628-201ENST00000628516 ABCC1P33527 1531 aa26.38■■□□□ 1.81
LINC00628-201ENST00000628516 ZNF777Q9ULD5 760 aaPredicted RBP26.37■■□□□ 1.81
LINC00628-201ENST00000628516 ARHGEF12Q9NZN5 1544 aa26.37■■□□□ 1.81
LINC00628-201ENST00000628516 TRAPPC8Q9Y2L5 1435 aa26.36■■□□□ 1.81
LINC00628-201ENST00000628516 MTUS2Q5JR59 1369 aa26.34■■□□□ 1.81
LINC00628-201ENST00000628516 GPATCH8Q9UKJ3 1502 aaKnown RBP26.34■■□□□ 1.81
LINC00628-201ENST00000628516 MLH3Q9UHC1 1453 aa26.33■■□□□ 1.81
LINC00628-201ENST00000628516 ITSN2Q9NZM3 1697 aa26.33■■□□□ 1.81
LINC00628-201ENST00000628516 DIP2CQ9Y2E4 1556 aa26.31■■□□□ 1.8
LINC00628-201ENST00000628516 FER1L4A9Z1Z3 1794 aa26.3■■□□□ 1.8
LINC00628-201ENST00000628516 CCNB3Q8WWL7 1395 aa26.3■■□□□ 1.8
LINC00628-201ENST00000628516 CFDP1Q9UEE9 299 aaPredicted RBP26.29■■□□□ 1.8
LINC00628-201ENST00000628516 SAMD9LQ8IVG5 1584 aa26.28■■□□□ 1.8
LINC00628-201ENST00000628516 LOC105371045A0A1W2PR82 267 aa26.27■■□□□ 1.8
LINC00628-201ENST00000628516 ABCA6Q8N139 1617 aa26.27■■□□□ 1.8
LINC00628-201ENST00000628516 LMTK3Q96Q04 1460 aa26.26■■□□□ 1.79
LINC00628-201ENST00000628516 HNRNPMP52272 730 aaKnown RBP eCLIP26.25■■□□□ 1.79
LINC00628-201ENST00000628516 REREQ9P2R6 1566 aa26.24■■□□□ 1.79
LINC00628-201ENST00000628516 SYCP2Q9BX26 1530 aa26.24■■□□□ 1.79
LINC00628-201ENST00000628516 EHBP1L1Q8N3D4 1523 aa26.23■■□□□ 1.79
LINC00628-201ENST00000628516 KIDINS220Q9ULH0 1771 aa26.21■■□□□ 1.79
LINC00628-201ENST00000628516 SPAG9O60271 1321 aaKnown RBP26.2■■□□□ 1.79
LINC00628-201ENST00000628516 PLEKHH2Q8IVE3 1493 aa26.2■■□□□ 1.78
LINC00628-201ENST00000628516 KIAA1107Q9UPP5 1409 aa26.2■■□□□ 1.78
LINC00628-201ENST00000628516 CEBPAP49715 358 aaPredicted RBP26.19■■□□□ 1.78
LINC00628-201ENST00000628516 HSPA2P54652 639 aa26.18■■□□□ 1.78
LINC00628-201ENST00000628516 AGLP35573 1532 aa26.17■■□□□ 1.78
LINC00628-201ENST00000628516 TIAM1Q13009 1591 aa26.16■■□□□ 1.78
LINC00628-201ENST00000628516 ESF1Q9H501 851 aaKnown RBP26.15■■□□□ 1.78
LINC00628-201ENST00000628516 ZNF644Q9H582 1327 aaPredicted RBP26.14■■□□□ 1.77
LINC00628-201ENST00000628516 ATP7AQ04656 1500 aa26.11■■□□□ 1.77
LINC00628-201ENST00000628516 VPS8Q8N3P4 1428 aa26.11■■□□□ 1.77
LINC00628-201ENST00000628516 NCOA2Q15596 1464 aa26.08■■□□□ 1.77
LINC00628-201ENST00000628516 SUPT6HQ7KZ85 1726 aaKnown RBP26.07■■□□□ 1.76
LINC00628-201ENST00000628516 INO80Q9ULG1 1556 aaPredicted RBP26.07■■□□□ 1.76
LINC00628-201ENST00000628516 FBXO41Q8TF61 875 aa26.05■■□□□ 1.76
LINC00628-201ENST00000628516 PREX1Q8TCU6 1659 aa26.05■■□□□ 1.76
LINC00628-201ENST00000628516 MBD5Q9P267 1494 aa26.04■■□□□ 1.76
LINC00628-201ENST00000628516 A2MP01023 1474 aa26.03■■□□□ 1.76
LINC00628-201ENST00000628516 CNTLNQ9NXG0 1405 aa26.02■■□□□ 1.76
LINC00628-201ENST00000628516 C3P01024 1663 aa26.02■■□□□ 1.76
LINC00628-201ENST00000628516 UHRF1BP1Q6BDS2 1440 aa26.01■■□□□ 1.75
LINC00628-201ENST00000628516 LRRC9Q6ZRR7 1453 aa26■■□□□ 1.75
LINC00628-201ENST00000628516 PLXNC1O60486 1568 aa25.99■■□□□ 1.75
LINC00628-201ENST00000628516 SETD1BQ9UPS6 1966 aaKnown RBP25.99■■□□□ 1.75
LINC00628-201ENST00000628516 CAMSAP2Q08AD1 1489 aa25.98■■□□□ 1.75
LINC00628-201ENST00000628516 RTEL1-TNFRSF6BF6WH68 1400 aa25.97■■□□□ 1.75
LINC00628-201ENST00000628516 GGT6Q6P531 493 aa25.96■■□□□ 1.75
LINC00628-201ENST00000628516 CCDC141Q6ZP82 1450 aa25.95■■□□□ 1.74
LINC00628-201ENST00000628516 ADGBQ8N7X0 1667 aa25.95■■□□□ 1.74
LINC00628-201ENST00000628516 KANK4Q5T7N3 995 aaPredicted RBP25.94■■□□□ 1.74
LINC00628-201ENST00000628516 RSPH4AQ5TD94 716 aa25.94■■□□□ 1.74
LINC00628-201ENST00000628516 ZMYM3Q14202 1370 aa25.94■■□□□ 1.74
LINC00628-201ENST00000628516 MAP3K1Q13233 1512 aa25.93■■□□□ 1.74
LINC00628-201ENST00000628516 MROH2AA6NES4 1674 aa25.9■■□□□ 1.74
LINC00628-201ENST00000628516 DHX29Q7Z478 1369 aaKnown RBP25.9■■□□□ 1.74
LINC00628-201ENST00000628516 CLTCQ00610 1675 aaKnown RBP25.88■■□□□ 1.73
LINC00628-201ENST00000628516 TSPY4P0CV99 314 aa25.87■■□□□ 1.73
LINC00628-201ENST00000628516 TSPY10P0CW01 314 aa25.87■■□□□ 1.73
LINC00628-201ENST00000628516 PPP6R1Q9UPN7 881 aa25.87■■□□□ 1.73
LINC00628-201ENST00000628516 NPATQ14207 1427 aa25.87■■□□□ 1.73
LINC00628-201ENST00000628516 APLP2Q06481 763 aa25.85■■□□□ 1.73
LINC00628-201ENST00000628516 DMRT2Q9Y5R5 561 aa25.85■■□□□ 1.73
LINC00628-201ENST00000628516 ARHGEF5Q12774 1597 aa25.85■■□□□ 1.73
LINC00628-201ENST00000628516 STRCQ7RTU9 1775 aa25.83■■□□□ 1.73
LINC00628-201ENST00000628516 KIF3BO15066 747 aa25.83■■□□□ 1.73
LINC00628-201ENST00000628516 MYOM3Q5VTT5 1437 aa25.81■■□□□ 1.72
LINC00628-201ENST00000628516 MIA2Q96PC5 1412 aa25.8■■□□□ 1.72
LINC00628-201ENST00000628516 PTPRKQ15262 1439 aa25.79■■□□□ 1.72
LINC00628-201ENST00000628516 CERKQ8TCT0 537 aa25.77■■□□□ 1.72
LINC00628-201ENST00000628516 NCOA1Q15788 1441 aa25.73■■□□□ 1.71
LINC00628-201ENST00000628516 PTPRTO14522 1441 aa25.72■■□□□ 1.71
LINC00628-201ENST00000628516 WASHC2CQ9Y4E1 1318 aa25.72■■□□□ 1.71
LINC00628-201ENST00000628516 CAMSAP1Q5T5Y3 1602 aa25.72■■□□□ 1.71
LINC00628-201ENST00000628516 MAST1Q9Y2H9 1570 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms