RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 ADAMTSL3P82987 1691 aa16.59■□□□□ 0.25
KCNMA1-225ENST00000626620 PHLDB1Q86UU1 1377 aa16.59■□□□□ 0.25
KCNMA1-225ENST00000626620 ITSN2Q9NZM3 1697 aa16.58■□□□□ 0.25
KCNMA1-225ENST00000626620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.57■□□□□ 0.24
KCNMA1-225ENST00000626620 HNRNPUL2Q1KMD3 747 aaKnown RBP16.57■□□□□ 0.24
KCNMA1-225ENST00000626620 SIGLEC1Q9BZZ2 1709 aa16.57■□□□□ 0.24
KCNMA1-225ENST00000626620 PLCH2O75038 1416 aa16.56■□□□□ 0.24
KCNMA1-225ENST00000626620 CFAP74Q9C0B2 1584 aa16.56■□□□□ 0.24
KCNMA1-225ENST00000626620 ZMYM4Q5VZL5 1548 aa16.55■□□□□ 0.24
KCNMA1-225ENST00000626620 SAMD9LQ8IVG5 1584 aa16.54■□□□□ 0.24
KCNMA1-225ENST00000626620 KCNH8Q96L42 1107 aa16.54■□□□□ 0.24
KCNMA1-225ENST00000626620 MYOM3Q5VTT5 1437 aa16.52■□□□□ 0.24
KCNMA1-225ENST00000626620 BCORL1Q5H9F3 1711 aa16.52■□□□□ 0.24
KCNMA1-225ENST00000626620 TCOF1Q13428 1488 aaKnown RBP16.51■□□□□ 0.23
KCNMA1-225ENST00000626620 ARHGEF40Q8TER5 1519 aa16.5■□□□□ 0.23
KCNMA1-225ENST00000626620 APLP2Q06481 763 aa16.5■□□□□ 0.23
KCNMA1-225ENST00000626620 PPARGC1BQ86YN6 1023 aaKnown RBP16.5■□□□□ 0.23
KCNMA1-225ENST00000626620 MIA2Q96PC5 1412 aa16.49■□□□□ 0.23
KCNMA1-225ENST00000626620 PTPN23Q9H3S7 1636 aa16.49■□□□□ 0.23
KCNMA1-225ENST00000626620 RRBP1Q9P2E9 1410 aaKnown RBP16.49■□□□□ 0.23
KCNMA1-225ENST00000626620 ARHGEF12Q9NZN5 1544 aa16.48■□□□□ 0.23
KCNMA1-225ENST00000626620 ABCC1P33527 1531 aa16.48■□□□□ 0.23
KCNMA1-225ENST00000626620 FGD6Q6ZV73 1430 aa16.47■□□□□ 0.23
KCNMA1-225ENST00000626620 CCNB3Q8WWL7 1395 aa16.47■□□□□ 0.23
KCNMA1-225ENST00000626620 HECW2Q9P2P5 1572 aa16.46■□□□□ 0.23
KCNMA1-225ENST00000626620 FANCAO15360 1455 aa16.46■□□□□ 0.23
KCNMA1-225ENST00000626620 ARHGAP5Q13017 1502 aa16.46■□□□□ 0.22
KCNMA1-225ENST00000626620 MBD5Q9P267 1494 aa16.45■□□□□ 0.22
KCNMA1-225ENST00000626620 CAMSAP2Q08AD1 1489 aa16.44■□□□□ 0.22
KCNMA1-225ENST00000626620 CROCC2H7BZ55 1655 aa16.43■□□□□ 0.22
KCNMA1-225ENST00000626620 ARHGEF5Q12774 1597 aa16.42■□□□□ 0.22
KCNMA1-225ENST00000626620 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.42■□□□□ 0.22
KCNMA1-225ENST00000626620 AKNAQ7Z591 1439 aa16.42■□□□□ 0.22
KCNMA1-225ENST00000626620 KIAA1107Q9UPP5 1409 aa16.42■□□□□ 0.22
KCNMA1-225ENST00000626620 ZNF644Q9H582 1327 aaPredicted RBP16.41■□□□□ 0.22
KCNMA1-225ENST00000626620 DNMT1P26358 1616 aaKnown RBP16.4■□□□□ 0.22
KCNMA1-225ENST00000626620 SYCP2Q9BX26 1530 aa16.4■□□□□ 0.22
KCNMA1-225ENST00000626620 KDM5CP41229 1560 aa16.4■□□□□ 0.22
KCNMA1-225ENST00000626620 MADDQ8WXG6 1647 aa16.38■□□□□ 0.21
KCNMA1-225ENST00000626620 MAGI2Q86UL8 1455 aa16.38■□□□□ 0.21
KCNMA1-225ENST00000626620 CFDP1Q9UEE9 299 aaPredicted RBP16.37■□□□□ 0.21
KCNMA1-225ENST00000626620 REREQ9P2R6 1566 aa16.36■□□□□ 0.21
KCNMA1-225ENST00000626620 MAST1Q9Y2H9 1570 aa16.36■□□□□ 0.21
KCNMA1-225ENST00000626620 DENND4BO75064 1496 aaPredicted RBP16.36■□□□□ 0.21
KCNMA1-225ENST00000626620 PLEKHH2Q8IVE3 1493 aa16.36■□□□□ 0.21
KCNMA1-225ENST00000626620 EFCAB2Q5VUJ9 269 aa16.36■□□□□ 0.21
KCNMA1-225ENST00000626620 TRAPPC8Q9Y2L5 1435 aa16.35■□□□□ 0.21
KCNMA1-225ENST00000626620 POGZQ7Z3K3 1410 aa16.35■□□□□ 0.21
KCNMA1-225ENST00000626620 PTPRMP28827 1452 aa16.35■□□□□ 0.21
KCNMA1-225ENST00000626620 PTPRKQ15262 1439 aa16.35■□□□□ 0.21
KCNMA1-225ENST00000626620 INO80Q9ULG1 1556 aaPredicted RBP16.35■□□□□ 0.21
KCNMA1-225ENST00000626620 ABCC5O15440 1437 aa16.33■□□□□ 0.21
KCNMA1-225ENST00000626620 ZFYVE16Q7Z3T8 1539 aa16.33■□□□□ 0.2
KCNMA1-225ENST00000626620 KIDINS220Q9ULH0 1771 aa16.33■□□□□ 0.2
KCNMA1-225ENST00000626620 SCAPERQ9BY12 1400 aa16.32■□□□□ 0.2
KCNMA1-225ENST00000626620 RAPGEF3O95398 923 aa16.32■□□□□ 0.2
KCNMA1-225ENST00000626620 DAPK1P53355 1430 aa16.31■□□□□ 0.2
KCNMA1-225ENST00000626620 SHANK2Q9UPX8 1470 aa16.31■□□□□ 0.2
KCNMA1-225ENST00000626620 CCDC141Q6ZP82 1450 aa16.3■□□□□ 0.2
KCNMA1-225ENST00000626620 RIMS1Q86UR5 1692 aaKnown RBP16.3■□□□□ 0.2
KCNMA1-225ENST00000626620 ADGBQ8N7X0 1667 aa16.29■□□□□ 0.2
KCNMA1-225ENST00000626620 ZNF518AQ6AHZ1 1483 aa16.29■□□□□ 0.2
KCNMA1-225ENST00000626620 YEATS2Q9ULM3 1422 aa16.29■□□□□ 0.2
KCNMA1-225ENST00000626620 FER1L4A9Z1Z3 1794 aa16.28■□□□□ 0.2
KCNMA1-225ENST00000626620 HNRNPMP52272 730 aaKnown RBP eCLIP16.28■□□□□ 0.2
KCNMA1-225ENST00000626620 MLH3Q9UHC1 1453 aa16.28■□□□□ 0.2
KCNMA1-225ENST00000626620 PLXNC1O60486 1568 aa16.28■□□□□ 0.2
KCNMA1-225ENST00000626620 ADGRL2O95490 1459 aa16.28■□□□□ 0.2
KCNMA1-225ENST00000626620 DIP2CQ9Y2E4 1556 aa16.27■□□□□ 0.2
KCNMA1-225ENST00000626620 LMTK3Q96Q04 1460 aa16.27■□□□□ 0.19
KCNMA1-225ENST00000626620 ABCA6Q8N139 1617 aa16.26■□□□□ 0.19
KCNMA1-225ENST00000626620 ZNF777Q9ULD5 760 aaPredicted RBP16.25■□□□□ 0.19
KCNMA1-225ENST00000626620 RTEL1-TNFRSF6BF6WH68 1400 aa16.25■□□□□ 0.19
KCNMA1-225ENST00000626620 ATP7AQ04656 1500 aa16.24■□□□□ 0.19
KCNMA1-225ENST00000626620 AFAP1Q8N556 730 aa16.24■□□□□ 0.19
KCNMA1-225ENST00000626620 RSPH4AQ5TD94 716 aa16.23■□□□□ 0.19
KCNMA1-225ENST00000626620 C9orf84Q5VXU9 1444 aa16.22■□□□□ 0.19
KCNMA1-225ENST00000626620 ATP10AO60312 1499 aa16.21■□□□□ 0.19
KCNMA1-225ENST00000626620 GCC2Q8IWJ2 1684 aa16.21■□□□□ 0.19
KCNMA1-225ENST00000626620 AGLP35573 1532 aa16.21■□□□□ 0.19
KCNMA1-225ENST00000626620 ROCK1Q13464 1354 aa16.2■□□□□ 0.18
KCNMA1-225ENST00000626620 NCOA1Q15788 1441 aa16.2■□□□□ 0.18
KCNMA1-225ENST00000626620 FAM50AQ14320 339 aaKnown RBP16.18■□□□□ 0.18
KCNMA1-225ENST00000626620 PREX1Q8TCU6 1659 aa16.18■□□□□ 0.18
KCNMA1-225ENST00000626620 MROH2AA6NES4 1674 aa16.15■□□□□ 0.18
KCNMA1-225ENST00000626620 C3P01024 1663 aa16.14■□□□□ 0.17
KCNMA1-225ENST00000626620 TRIM26Q12899 539 aaPredicted RBP16.14■□□□□ 0.17
KCNMA1-225ENST00000626620 NAIPQ13075 1403 aa16.14■□□□□ 0.17
KCNMA1-225ENST00000626620 EIF2AK4Q9P2K8 1649 aaKnown RBP16.14■□□□□ 0.17
KCNMA1-225ENST00000626620 HFM1A2PYH4 1435 aa16.13■□□□□ 0.17
KCNMA1-225ENST00000626620 DEPDC5O75140 1603 aa16.13■□□□□ 0.17
KCNMA1-225ENST00000626620 SPAG9O60271 1321 aaKnown RBP16.13■□□□□ 0.17
KCNMA1-225ENST00000626620 DUOX2Q9NRD8 1548 aa16.13■□□□□ 0.17
KCNMA1-225ENST00000626620 STRCQ7RTU9 1775 aa16.12■□□□□ 0.17
KCNMA1-225ENST00000626620 MROH1Q8NDA8 1641 aa16.12■□□□□ 0.17
KCNMA1-225ENST00000626620 RNF17Q9BXT8 1623 aaKnown RBP16.11■□□□□ 0.17
KCNMA1-225ENST00000626620 A2MP01023 1474 aa16.09■□□□□ 0.17
KCNMA1-225ENST00000626620 ERBINQ96RT1 1412 aa16.08■□□□□ 0.17
KCNMA1-225ENST00000626620 DHX29Q7Z478 1369 aaKnown RBP16.08■□□□□ 0.17
KCNMA1-225ENST00000626620 ANKRD30AQ9BXX3 1397 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms