RNA–Protein interactions for RNA: ENST00000625664.2

USP8-219, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5 BASIC

Gene USP8, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-219ENST00000625664 POGZQ7Z3K3 1410 aa20.15■□□□□ 0.82
USP8-219ENST00000625664 CDC42BPBQ9Y5S2 1711 aa20.15■□□□□ 0.82
USP8-219ENST00000625664 ARHGEF40Q8TER5 1519 aa20.14■□□□□ 0.81
USP8-219ENST00000625664 ZMYM4Q5VZL5 1548 aa20.14■□□□□ 0.81
USP8-219ENST00000625664 PREX2Q70Z35 1606 aa20.13■□□□□ 0.81
USP8-219ENST00000625664 MTUS2Q5JR59 1369 aa20.12■□□□□ 0.81
USP8-219ENST00000625664 CDC42BPAQ5VT25 1732 aa20.11■□□□□ 0.81
USP8-219ENST00000625664 YEATS2Q9ULM3 1422 aa20.11■□□□□ 0.81
USP8-219ENST00000625664 ZFYVE16Q7Z3T8 1539 aa20.1■□□□□ 0.81
USP8-219ENST00000625664 ARID4BQ4LE39 1312 aaPredicted RBP20.1■□□□□ 0.81
USP8-219ENST00000625664 MAGI2Q86UL8 1455 aa20.08■□□□□ 0.8
USP8-219ENST00000625664 VPS8Q8N3P4 1428 aa20.07■□□□□ 0.8
USP8-219ENST00000625664 ZNF518AQ6AHZ1 1483 aa20.06■□□□□ 0.8
USP8-219ENST00000625664 GPATCH8Q9UKJ3 1502 aaKnown RBP20.06■□□□□ 0.8
USP8-219ENST00000625664 AFAP1Q8N556 730 aa20.06■□□□□ 0.8
USP8-219ENST00000625664 ABCC1P33527 1531 aa20.05■□□□□ 0.8
USP8-219ENST00000625664 EHBP1L1Q8N3D4 1523 aa20.05■□□□□ 0.8
USP8-219ENST00000625664 ZNF777Q9ULD5 760 aaPredicted RBP20.05■□□□□ 0.8
USP8-219ENST00000625664 CCNB3Q8WWL7 1395 aa20.04■□□□□ 0.8
USP8-219ENST00000625664 ARHGEF12Q9NZN5 1544 aa20.03■□□□□ 0.8
USP8-219ENST00000625664 BCORL1Q5H9F3 1711 aa20.03■□□□□ 0.8
USP8-219ENST00000625664 ADAMTSL3P82987 1691 aa20.02■□□□□ 0.8
USP8-219ENST00000625664 KDM5CP41229 1560 aa20.02■□□□□ 0.8
USP8-219ENST00000625664 TRAPPC8Q9Y2L5 1435 aa20.02■□□□□ 0.8
USP8-219ENST00000625664 MYT1LQ9UL68 1186 aa20.02■□□□□ 0.8
USP8-219ENST00000625664 ITSN2Q9NZM3 1697 aa20.01■□□□□ 0.79
USP8-219ENST00000625664 SIGLEC1Q9BZZ2 1709 aa20.01■□□□□ 0.79
USP8-219ENST00000625664 TIAM1Q13009 1591 aa20.01■□□□□ 0.79
USP8-219ENST00000625664 SAMD9LQ8IVG5 1584 aa20.01■□□□□ 0.79
USP8-219ENST00000625664 CFDP1Q9UEE9 299 aaPredicted RBP20■□□□□ 0.79
USP8-219ENST00000625664 HECW2Q9P2P5 1572 aa19.99■□□□□ 0.79
USP8-219ENST00000625664 ATP10AO60312 1499 aa19.99■□□□□ 0.79
USP8-219ENST00000625664 MADDQ8WXG6 1647 aa19.98■□□□□ 0.79
USP8-219ENST00000625664 SYCP2Q9BX26 1530 aa19.98■□□□□ 0.79
USP8-219ENST00000625664 C9orf84Q5VXU9 1444 aa19.97■□□□□ 0.79
USP8-219ENST00000625664 MLECQ14165 292 aa19.96■□□□□ 0.79
USP8-219ENST00000625664 PTPRMP28827 1452 aa19.96■□□□□ 0.79
USP8-219ENST00000625664 HNRNPMP52272 730 aaKnown RBP eCLIP19.95■□□□□ 0.78
USP8-219ENST00000625664 MLH3Q9UHC1 1453 aa19.95■□□□□ 0.78
USP8-219ENST00000625664 NCOA2Q15596 1464 aa19.94■□□□□ 0.78
USP8-219ENST00000625664 SUPT6HQ7KZ85 1726 aaKnown RBP19.94■□□□□ 0.78
USP8-219ENST00000625664 DIP2CQ9Y2E4 1556 aa19.94■□□□□ 0.78
USP8-219ENST00000625664 ABCA6Q8N139 1617 aa19.93■□□□□ 0.78
USP8-219ENST00000625664 LRRC9Q6ZRR7 1453 aa19.92■□□□□ 0.78
USP8-219ENST00000625664 PLEKHH2Q8IVE3 1493 aa19.92■□□□□ 0.78
USP8-219ENST00000625664 ZNF644Q9H582 1327 aaPredicted RBP19.92■□□□□ 0.78
USP8-219ENST00000625664 RIMS1Q86UR5 1692 aaKnown RBP19.92■□□□□ 0.78
USP8-219ENST00000625664 KIAA1107Q9UPP5 1409 aa19.91■□□□□ 0.78
USP8-219ENST00000625664 KIDINS220Q9ULH0 1771 aa19.9■□□□□ 0.78
USP8-219ENST00000625664 KANK4Q5T7N3 995 aaPredicted RBP19.89■□□□□ 0.77
USP8-219ENST00000625664 SPAG9O60271 1321 aaKnown RBP19.89■□□□□ 0.77
USP8-219ENST00000625664 MAP3K1Q13233 1512 aa19.88■□□□□ 0.77
USP8-219ENST00000625664 PLPPR3Q6T4P5 718 aa19.87■□□□□ 0.77
USP8-219ENST00000625664 REREQ9P2R6 1566 aa19.86■□□□□ 0.77
USP8-219ENST00000625664 FER1L4A9Z1Z3 1794 aa19.86■□□□□ 0.77
USP8-219ENST00000625664 ATP7AQ04656 1500 aa19.84■□□□□ 0.77
USP8-219ENST00000625664 APLP2Q06481 763 aa19.83■□□□□ 0.77
USP8-219ENST00000625664 MBD5Q9P267 1494 aa19.83■□□□□ 0.77
USP8-219ENST00000625664 CAMSAP2Q08AD1 1489 aa19.82■□□□□ 0.76
USP8-219ENST00000625664 INO80Q9ULG1 1556 aaPredicted RBP19.82■□□□□ 0.76
USP8-219ENST00000625664 AGLP35573 1532 aa19.81■□□□□ 0.76
USP8-219ENST00000625664 CCDC141Q6ZP82 1450 aa19.77■□□□□ 0.76
USP8-219ENST00000625664 MYOM3Q5VTT5 1437 aa19.76■□□□□ 0.75
USP8-219ENST00000625664 A2MP01023 1474 aa19.75■□□□□ 0.75
USP8-219ENST00000625664 CEBPAP49715 358 aaPredicted RBP19.74■□□□□ 0.75
USP8-219ENST00000625664 PLXNC1O60486 1568 aa19.73■□□□□ 0.75
USP8-219ENST00000625664 RTEL1-TNFRSF6BF6WH68 1400 aa19.73■□□□□ 0.75
USP8-219ENST00000625664 ESF1Q9H501 851 aaKnown RBP19.73■□□□□ 0.75
USP8-219ENST00000625664 RSPH4AQ5TD94 716 aa19.72■□□□□ 0.75
USP8-219ENST00000625664 ARHGEF5Q12774 1597 aa19.72■□□□□ 0.75
USP8-219ENST00000625664 ADGBQ8N7X0 1667 aa19.71■□□□□ 0.75
USP8-219ENST00000625664 LMTK3Q96Q04 1460 aa19.71■□□□□ 0.75
USP8-219ENST00000625664 MIA2Q96PC5 1412 aa19.71■□□□□ 0.75
USP8-219ENST00000625664 TSPY4P0CV99 314 aa19.68■□□□□ 0.74
USP8-219ENST00000625664 TSPY10P0CW01 314 aa19.68■□□□□ 0.74
USP8-219ENST00000625664 GGT6Q6P531 493 aa19.67■□□□□ 0.74
USP8-219ENST00000625664 CNTLNQ9NXG0 1405 aa19.66■□□□□ 0.74
USP8-219ENST00000625664 C3P01024 1663 aa19.66■□□□□ 0.74
USP8-219ENST00000625664 HSPA2P54652 639 aa19.66■□□□□ 0.74
USP8-219ENST00000625664 DHX29Q7Z478 1369 aaKnown RBP19.65■□□□□ 0.74
USP8-219ENST00000625664 PTPN23Q9H3S7 1636 aa19.63■□□□□ 0.73
USP8-219ENST00000625664 FGD6Q6ZV73 1430 aa19.62■□□□□ 0.73
USP8-219ENST00000625664 KIF3BO15066 747 aa19.61■□□□□ 0.73
USP8-219ENST00000625664 CLTCQ00610 1675 aaKnown RBP19.61■□□□□ 0.73
USP8-219ENST00000625664 PREX1Q8TCU6 1659 aa19.61■□□□□ 0.73
USP8-219ENST00000625664 MAST1Q9Y2H9 1570 aa19.61■□□□□ 0.73
USP8-219ENST00000625664 MROH2AA6NES4 1674 aa19.6■□□□□ 0.73
USP8-219ENST00000625664 ZMYM3Q14202 1370 aa19.59■□□□□ 0.73
USP8-219ENST00000625664 SETD1BQ9UPS6 1966 aaKnown RBP19.58■□□□□ 0.73
USP8-219ENST00000625664 UHRF1BP1Q6BDS2 1440 aa19.58■□□□□ 0.72
USP8-219ENST00000625664 TCOF1Q13428 1488 aaKnown RBP19.57■□□□□ 0.72
USP8-219ENST00000625664 ABCC5O15440 1437 aa19.56■□□□□ 0.72
USP8-219ENST00000625664 PPP6R1Q9UPN7 881 aa19.55■□□□□ 0.72
USP8-219ENST00000625664 CROCC2H7BZ55 1655 aa19.55■□□□□ 0.72
USP8-219ENST00000625664 DAPK1P53355 1430 aa19.54■□□□□ 0.72
USP8-219ENST00000625664 DNMT1P26358 1616 aaKnown RBP19.54■□□□□ 0.72
USP8-219ENST00000625664 SHANK2Q9UPX8 1470 aa19.53■□□□□ 0.72
USP8-219ENST00000625664 NPATQ14207 1427 aa19.52■□□□□ 0.72
USP8-219ENST00000625664 FAM50AQ14320 339 aaKnown RBP19.51■□□□□ 0.71
USP8-219ENST00000625664 PPARGC1BQ86YN6 1023 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms