RNA–Protein interactions for RNA: ENST00000625664.2

USP8-219, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5 BASIC

Gene USP8, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-219ENST00000625664 NISCHQ9Y2I1 1504 aa30.92■■■□□ 2.54
USP8-219ENST00000625664 CCDC180Q9P1Z9 1646 aa27.56■■■□□ 2
USP8-219ENST00000625664 ABCC9O60706 1549 aa27.24■■□□□ 1.95
USP8-219ENST00000625664 RB1CC1Q8TDY2 1594 aa26.06■■□□□ 1.76
USP8-219ENST00000625664 DCAF8L2P0C7V8 631 aa26■■□□□ 1.75
USP8-219ENST00000625664 NACADO15069 1562 aa25.96■■□□□ 1.75
USP8-219ENST00000625664 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
USP8-219ENST00000625664 MYO15BQ96JP2 1530 aa25.71■■□□□ 1.71
USP8-219ENST00000625664 DCAF1Q9Y4B6 1507 aa25.54■■□□□ 1.68
USP8-219ENST00000625664 UNC13AQ9UPW8 1703 aa25.48■■□□□ 1.67
USP8-219ENST00000625664 PABPN1Q86U42 306 aaKnown RBP eCLIP25.44■■□□□ 1.66
USP8-219ENST00000625664 BICRAQ9NZM4 1560 aa25.3■■□□□ 1.64
USP8-219ENST00000625664 SCRIBQ14160 1630 aa25.2■■□□□ 1.63
USP8-219ENST00000625664 DNAJC5BQ9UF47 199 aa25.18■■□□□ 1.62
USP8-219ENST00000625664 SHROOM4Q9ULL8 1493 aa24.94■■□□□ 1.58
USP8-219ENST00000625664 EIF4G1Q04637 1599 aaKnown RBP24.64■■□□□ 1.54
USP8-219ENST00000625664 CC2D2AQ9P2K1 1620 aa24.6■■□□□ 1.53
USP8-219ENST00000625664 CECR2Q9BXF3 1484 aa24.47■■□□□ 1.51
USP8-219ENST00000625664 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
USP8-219ENST00000625664 BAZ1AQ9NRL2 1556 aaPredicted RBP23.98■■□□□ 1.43
USP8-219ENST00000625664 NCAPD3P42695 1498 aa23.97■■□□□ 1.43
USP8-219ENST00000625664 ATAD2BQ9ULI0 1458 aa23.97■■□□□ 1.43
USP8-219ENST00000625664 SMARCA2P51531 1590 aa23.92■■□□□ 1.42
USP8-219ENST00000625664 MROH2BQ7Z745 1585 aa23.85■■□□□ 1.41
USP8-219ENST00000625664 HMGXB3Q12766 1538 aa23.82■■□□□ 1.4
USP8-219ENST00000625664 PEG3Q9GZU2 1588 aa23.78■■□□□ 1.4
USP8-219ENST00000625664 BAZ1BQ9UIG0 1483 aaKnown RBP23.77■■□□□ 1.4
USP8-219ENST00000625664 WIZO95785 1651 aa23.59■■□□□ 1.37
USP8-219ENST00000625664 NESP48681 1621 aa23.51■■□□□ 1.35
USP8-219ENST00000625664 RSF1Q96T23 1441 aaPredicted RBP23.5■■□□□ 1.35
USP8-219ENST00000625664 ERCC6Q03468 1493 aa23.48■■□□□ 1.35
USP8-219ENST00000625664 LAMC3Q9Y6N6 1575 aa23.37■■□□□ 1.33
USP8-219ENST00000625664 TOP2AP11388 1531 aaKnown RBP23.3■■□□□ 1.32
USP8-219ENST00000625664 CADPSQ9ULU8 1353 aa23.27■■□□□ 1.32
USP8-219ENST00000625664 CUX2O14529 1486 aa23.26■■□□□ 1.31
USP8-219ENST00000625664 PDS5BQ9NTI5 1447 aa23.23■■□□□ 1.31
USP8-219ENST00000625664 KIF21AQ7Z4S6 1674 aa23.21■■□□□ 1.31
USP8-219ENST00000625664 THOC2Q8NI27 1593 aaKnown RBP23.17■■□□□ 1.3
USP8-219ENST00000625664 CFTRP13569 1480 aa23.09■■□□□ 1.29
USP8-219ENST00000625664 CCDC88BA6NC98 1476 aa23.04■■□□□ 1.28
USP8-219ENST00000625664 FANCD2Q9BXW9 1451 aa23.02■■□□□ 1.28
USP8-219ENST00000625664 MRC2Q9UBG0 1479 aa23.02■■□□□ 1.27
USP8-219ENST00000625664 CEP164Q9UPV0 1460 aa23.01■■□□□ 1.27
USP8-219ENST00000625664 WDR62O43379 1518 aa22.93■■□□□ 1.26
USP8-219ENST00000625664 PRDM2Q13029 1718 aa22.87■■□□□ 1.25
USP8-219ENST00000625664 SUPT5HO00267 1087 aaKnown RBP22.82■■□□□ 1.24
USP8-219ENST00000625664 DNAJC5Q9H3Z4 198 aa22.81■■□□□ 1.24
USP8-219ENST00000625664 URB2Q14146 1524 aaKnown RBP22.81■■□□□ 1.24
USP8-219ENST00000625664 TOPBP1Q92547 1522 aa22.63■■□□□ 1.21
USP8-219ENST00000625664 ABCC8Q09428 1581 aa22.57■■□□□ 1.2
USP8-219ENST00000625664 DNMBPQ6XZF7 1577 aa22.57■■□□□ 1.2
USP8-219ENST00000625664 IFT140Q96RY7 1462 aa22.52■■□□□ 1.2
USP8-219ENST00000625664 ZNF608Q9ULD9 1512 aaPredicted RBP22.47■■□□□ 1.19
USP8-219ENST00000625664 POLA1P09884 1462 aaPredicted RBP22.43■■□□□ 1.18
USP8-219ENST00000625664 CUX1P39880 1505 aa22.39■■□□□ 1.17
USP8-219ENST00000625664 TARBP1Q13395 1621 aaKnown RBP22.38■■□□□ 1.17
USP8-219ENST00000625664 EIF4G3O43432 1585 aaKnown RBP22.36■■□□□ 1.17
USP8-219ENST00000625664 RAD54L2Q9Y4B4 1467 aa22.36■■□□□ 1.17
USP8-219ENST00000625664 FGD5Q6ZNL6 1462 aa22.35■■□□□ 1.17
USP8-219ENST00000625664 SOGA1O94964 1423 aa22.33■■□□□ 1.17
USP8-219ENST00000625664 AQRO60306 1485 aaKnown RBP eCLIP22.32■■□□□ 1.163e-6■■■□□ 14.6
USP8-219ENST00000625664 OSCARQ8IYS5 282 aa22.29■■□□□ 1.16
USP8-219ENST00000625664 TDRD9Q8NDG6 1382 aaKnown RBP22.26■■□□□ 1.15
USP8-219ENST00000625664 WRNQ14191 1432 aaPredicted RBP eCLIP22.17■■□□□ 1.14
USP8-219ENST00000625664 WDR97A6NE52 1622 aa22.15■■□□□ 1.14
USP8-219ENST00000625664 SYNJ1O43426 1573 aa22.13■■□□□ 1.13
USP8-219ENST00000625664 CHD1O14646 1710 aa22.13■■□□□ 1.13
USP8-219ENST00000625664 TOP2BQ02880 1626 aa22.12■■□□□ 1.13
USP8-219ENST00000625664 BIVM-ERCC5R4GMW8 1640 aa22.12■■□□□ 1.13
USP8-219ENST00000625664 FBLN2P98095 1184 aa22.12■■□□□ 1.13
USP8-219ENST00000625664 SNAPC4Q5SXM2 1469 aa22.11■■□□□ 1.13
USP8-219ENST00000625664 ABCA10Q8WWZ4 1543 aa22.09■■□□□ 1.13
USP8-219ENST00000625664 GRIN2BQ13224 1484 aa22.08■■□□□ 1.13
USP8-219ENST00000625664 GAPVD1Q14C86 1478 aa22.07■■□□□ 1.12
USP8-219ENST00000625664 TRIM41Q8WV44 630 aa22.04■■□□□ 1.12
USP8-219ENST00000625664 MAGI1Q96QZ7 1491 aaPredicted RBP22.04■■□□□ 1.12
USP8-219ENST00000625664 PBRM1Q86U86 1689 aa22.03■■□□□ 1.12
USP8-219ENST00000625664 ABCA5Q8WWZ7 1642 aa22.03■■□□□ 1.12
USP8-219ENST00000625664 CHMP7Q8WUX9 453 aaPredicted RBP21.99■■□□□ 1.11
USP8-219ENST00000625664 RIMBP3CA6NJZ7 1639 aa21.96■■□□□ 1.11
USP8-219ENST00000625664 RIMBP3BA6NNM3 1639 aa21.96■■□□□ 1.11
USP8-219ENST00000625664 RIMBP3Q9UFD9 1639 aa21.96■■□□□ 1.11
USP8-219ENST00000625664 SYNJ2O15056 1496 aa21.96■■□□□ 1.11
USP8-219ENST00000625664 ARHGEF11O15085 1522 aa21.94■■□□□ 1.1
USP8-219ENST00000625664 CLASP1Q7Z460 1538 aa21.86■■□□□ 1.09
USP8-219ENST00000625664 ADAMTS12P58397 1594 aa21.85■■□□□ 1.09
USP8-219ENST00000625664 ERICH3Q5RHP9 1530 aa21.82■■□□□ 1.08
USP8-219ENST00000625664 GRIN2AQ12879 1464 aa21.81■■□□□ 1.08
USP8-219ENST00000625664 FHAD1B1AJZ9 1412 aa21.79■■□□□ 1.08
USP8-219ENST00000625664 CYB5RLQ6IPT4 315 aa21.77■■□□□ 1.08
USP8-219ENST00000625664 ARAP1Q96P48 1450 aa21.76■■□□□ 1.07
USP8-219ENST00000625664 KIF27Q86VH2 1401 aa21.71■■□□□ 1.07
USP8-219ENST00000625664 CEP170Q5SW79 1584 aa21.71■■□□□ 1.07
USP8-219ENST00000625664 NUP160Q12769 1436 aa21.71■■□□□ 1.07
USP8-219ENST00000625664 IGF1RP08069 1367 aa21.65■■□□□ 1.06
USP8-219ENST00000625664 ERCC6L2Q5T890 1561 aa21.59■■□□□ 1.05
USP8-219ENST00000625664 CUL7Q14999 1698 aa21.59■■□□□ 1.05
USP8-219ENST00000625664 SHROOM2Q13796 1616 aa21.55■■□□□ 1.04
USP8-219ENST00000625664 CARMIL1Q5VZK9 1371 aa21.53■■□□□ 1.04
USP8-219ENST00000625664 RUSC2Q8N2Y8 1516 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms