RNA–Protein interactions for RNA: ENST00000625278.2

LINC02246-204, Transcript of long intergenic non-protein coding RNA 2246, humanhuman

TSL 5 BASIC

Gene LINC02246, Length 740 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02246-204ENST00000625278 NCKAP5LQ9HCH0 1330 aa17.19■□□□□ 0.34
LINC02246-204ENST00000625278 KDM2AQ9Y2K7 1162 aa17.17■□□□□ 0.34
LINC02246-204ENST00000625278 LARP6Q9BRS8 491 aaKnown RBP17.15■□□□□ 0.34
LINC02246-204ENST00000625278 SCUBE2Q9NQ36 999 aa17.15■□□□□ 0.34
LINC02246-204ENST00000625278 PDE4AP27815 886 aa17.14■□□□□ 0.33
LINC02246-204ENST00000625278 MAMSTRQ6ZN01 415 aa17.14■□□□□ 0.33
LINC02246-204ENST00000625278 C2orf72A6NCS6 295 aa17.13■□□□□ 0.33
LINC02246-204ENST00000625278 VSIG10Q8N0Z9 540 aa17.13■□□□□ 0.33
LINC02246-204ENST00000625278 TMC2Q8TDI7 906 aa17.13■□□□□ 0.33
LINC02246-204ENST00000625278 CRISPLD2Q9H0B8 497 aa17.13■□□□□ 0.33
LINC02246-204ENST00000625278 OTUD5Q96G74 571 aa17.12■□□□□ 0.33
LINC02246-204ENST00000625278 GPHNQ9NQX3 736 aaPredicted RBP17.11■□□□□ 0.33
LINC02246-204ENST00000625278 SLAIN1Q8ND83 568 aa17.09■□□□□ 0.33
LINC02246-204ENST00000625278 KIF3CO14782 793 aa17.07■□□□□ 0.32
LINC02246-204ENST00000625278 WDR70Q9NW82 654 aa17.05■□□□□ 0.32
LINC02246-204ENST00000625278 DSG2Q14126 1118 aa17.04■□□□□ 0.32
LINC02246-204ENST00000625278 DDX27Q96GQ7 796 aaKnown RBP17.03■□□□□ 0.32
LINC02246-204ENST00000625278 MFSD10Q14728 455 aa17■□□□□ 0.31
LINC02246-204ENST00000625278 FOXK1P85037 733 aa16.99■□□□□ 0.31
LINC02246-204ENST00000625278 PPP1R15BQ5SWA1 713 aa16.99■□□□□ 0.31
LINC02246-204ENST00000625278 PLPP6Q8IY26 295 aa16.98■□□□□ 0.31
LINC02246-204ENST00000625278 E2F4Q16254 413 aa16.88■□□□□ 0.29
LINC02246-204ENST00000625278 CAMK2BQ13554 666 aa16.81■□□□□ 0.28
LINC02246-204ENST00000625278 HOXB3P14651 431 aaPredicted RBP16.8■□□□□ 0.28
LINC02246-204ENST00000625278 KCNV2Q8TDN2 545 aa16.8■□□□□ 0.28
LINC02246-204ENST00000625278 UPF1Q92900 1129 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC02246-204ENST00000625278 EMILIN3Q9NT22 766 aa16.8■□□□□ 0.28
LINC02246-204ENST00000625278 DOK7Q18PE1 504 aa16.75■□□□□ 0.27
LINC02246-204ENST00000625278 SNPHO15079 494 aa16.74■□□□□ 0.27
LINC02246-204ENST00000625278 SLC34A2O95436 690 aa16.72■□□□□ 0.27
LINC02246-204ENST00000625278 P3H3Q8IVL6 736 aa16.71■□□□□ 0.27
LINC02246-204ENST00000625278 OXER1Q8TDS5 423 aa16.71■□□□□ 0.27
LINC02246-204ENST00000625278 DPYSL4O14531 572 aa16.7■□□□□ 0.26
LINC02246-204ENST00000625278 MAP3K9P80192 1104 aa16.7■□□□□ 0.26
LINC02246-204ENST00000625278 ZNF710Q8N1W2 664 aa16.7■□□□□ 0.26
LINC02246-204ENST00000625278 PTCD2Q8WV60 388 aaKnown RBP16.7■□□□□ 0.26
LINC02246-204ENST00000625278 KHSRPQ92945 711 aaKnown RBP eCLIP16.68■□□□□ 0.26
LINC02246-204ENST00000625278 PCDHGA4Q9Y5G9 962 aa16.68■□□□□ 0.26
LINC02246-204ENST00000625278 ARSIQ5FYB1 569 aa16.67■□□□□ 0.26
LINC02246-204ENST00000625278 ARHGEF1Q92888 912 aaKnown RBP16.67■□□□□ 0.26
LINC02246-204ENST00000625278 RIMBP2O15034 1052 aa16.66■□□□□ 0.26
LINC02246-204ENST00000625278 FAM163AQ96GL9 167 aaPredicted RBP16.66■□□□□ 0.26
LINC02246-204ENST00000625278 TBC1D12O60347 775 aa16.65■□□□□ 0.26
LINC02246-204ENST00000625278 GPR153Q6NV75 609 aa16.62■□□□□ 0.25
LINC02246-204ENST00000625278 ARIH1Q9Y4X5 557 aaPredicted RBP16.61■□□□□ 0.25
LINC02246-204ENST00000625278 ST18O60284 1047 aa16.59■□□□□ 0.25
LINC02246-204ENST00000625278 ZSWIM6Q9HCJ5 1215 aa16.59■□□□□ 0.25
LINC02246-204ENST00000625278 EVI5O60447 810 aa16.57■□□□□ 0.24
LINC02246-204ENST00000625278 NUDT7P0C024 238 aa16.57■□□□□ 0.24
LINC02246-204ENST00000625278 HOXB1P14653 301 aaPredicted RBP16.53■□□□□ 0.24
LINC02246-204ENST00000625278 KDM4FA0A1W2PPD8 638 aa16.51■□□□□ 0.23
LINC02246-204ENST00000625278 SEMA3EO15041 775 aa16.51■□□□□ 0.23
LINC02246-204ENST00000625278 SPDYE16A6NNV3 312 aaPredicted RBP16.5■□□□□ 0.23
LINC02246-204ENST00000625278 PDIA6Q15084 440 aa16.5■□□□□ 0.23
LINC02246-204ENST00000625278 NBR1Q14596 966 aa16.49■□□□□ 0.23
LINC02246-204ENST00000625278 MARVELD3Q96A59 401 aa16.49■□□□□ 0.23
LINC02246-204ENST00000625278 LCE2DQ5TA82 110 aaPredicted RBP16.48■□□□□ 0.23
LINC02246-204ENST00000625278 ANO8Q9HCE9 1232 aaPredicted RBP16.47■□□□□ 0.23
LINC02246-204ENST00000625278 ZNF316A6NFI3 1004 aaPredicted RBP16.44■□□□□ 0.22
LINC02246-204ENST00000625278 DDX12PQ92771 950 aa16.44■□□□□ 0.22
LINC02246-204ENST00000625278 LHX6Q9UPM6 363 aa16.44■□□□□ 0.22
LINC02246-204ENST00000625278 MLLT3P42568 568 aaPredicted RBP16.43■□□□□ 0.22
LINC02246-204ENST00000625278 GRXCR2A6NFK2 248 aa16.41■□□□□ 0.22
LINC02246-204ENST00000625278 BCANQ96GW7 911 aa16.41■□□□□ 0.22
LINC02246-204ENST00000625278 EMP3P54852 163 aa16.39■□□□□ 0.21
LINC02246-204ENST00000625278 TESPA1A2RU30 521 aaPredicted RBP16.37■□□□□ 0.21
LINC02246-204ENST00000625278 PTGER2P43116 358 aa16.37■□□□□ 0.21
LINC02246-204ENST00000625278 ERBB3P21860 1342 aa16.37■□□□□ 0.21
LINC02246-204ENST00000625278 FAM205CA6NFA0 338 aa16.34■□□□□ 0.21
LINC02246-204ENST00000625278 ZNF454Q8N9F8 522 aa16.33■□□□□ 0.2
LINC02246-204ENST00000625278 PCDHGA10Q9Y5H3 936 aa16.32■□□□□ 0.2
LINC02246-204ENST00000625278 VARS2Q5ST30 1063 aaKnown RBP16.31■□□□□ 0.2
LINC02246-204ENST00000625278 FOSBP53539 338 aa16.3■□□□□ 0.2
LINC02246-204ENST00000625278 POTEB3A0JP26 581 aa16.28■□□□□ 0.2
LINC02246-204ENST00000625278 PHF14O94880 888 aa16.28■□□□□ 0.2
LINC02246-204ENST00000625278 POTEBQ6S5H4 581 aa16.28■□□□□ 0.2
LINC02246-204ENST00000625278 JPH4Q96JJ6 628 aa16.28■□□□□ 0.2
LINC02246-204ENST00000625278 OSBPP22059 807 aa16.27■□□□□ 0.2
LINC02246-204ENST00000625278 PRIM1P49642 420 aaKnown RBP16.26■□□□□ 0.19
LINC02246-204ENST00000625278 SMYD5Q6GMV2 418 aa16.26■□□□□ 0.19
LINC02246-204ENST00000625278 RBM33Q96EV2 1170 aaKnown RBP16.26■□□□□ 0.19
LINC02246-204ENST00000625278 PPP4R3BQ5MIZ7 849 aa16.24■□□□□ 0.19
LINC02246-204ENST00000625278 HS3ST6Q96QI5 342 aa16.24■□□□□ 0.19
LINC02246-204ENST00000625278 EPAS1Q99814 870 aa16.24■□□□□ 0.19
LINC02246-204ENST00000625278 PSDA5PKW4 1024 aaPredicted RBP16.23■□□□□ 0.19
LINC02246-204ENST00000625278 TYW1BQ6NUM6 668 aa16.23■□□□□ 0.19
LINC02246-204ENST00000625278 ZDHHC16Q969W1 377 aa16.23■□□□□ 0.19
LINC02246-204ENST00000625278 RBM26Q5T8P6 1007 aaKnown RBP16.22■□□□□ 0.19
LINC02246-204ENST00000625278 ADAM33Q9BZ11 813 aa16.21■□□□□ 0.19
LINC02246-204ENST00000625278 TULP1O00294 542 aaPredicted RBP16.19■□□□□ 0.18
LINC02246-204ENST00000625278 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.19■□□□□ 0.18
LINC02246-204ENST00000625278 FBXW7Q969H0 707 aa16.18■□□□□ 0.18
LINC02246-204ENST00000625278 MAP3K7O43318 606 aa16.17■□□□□ 0.18
LINC02246-204ENST00000625278 POTEGQ6S5H5 508 aa16.17■□□□□ 0.18
LINC02246-204ENST00000625278 POTEMA6NI47 508 aa16.16■□□□□ 0.18
LINC02246-204ENST00000625278 EN1Q05925 392 aaPredicted RBP16.16■□□□□ 0.18
LINC02246-204ENST00000625278 TSR1Q2NL82 804 aaKnown RBP16.14■□□□□ 0.17
LINC02246-204ENST00000625278 LMOD2Q6P5Q4 547 aa16.14■□□□□ 0.17
LINC02246-204ENST00000625278 ZNF687Q8N1G0 1237 aa16.14■□□□□ 0.17
LINC02246-204ENST00000625278 NUTM2FA1L443 756 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms