RNA–Protein interactions for RNA: ENST00000622433.4

MECP2-213, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-213ENST00000622433 CDC42BPAQ5VT25 1732 aa21.18■□□□□ 0.98
MECP2-213ENST00000622433 KANK4Q5T7N3 995 aaPredicted RBP21.17■□□□□ 0.98
MECP2-213ENST00000622433 EFCAB2Q5VUJ9 269 aa21.17■□□□□ 0.98
MECP2-213ENST00000622433 ARHGAP5Q13017 1502 aa21.17■□□□□ 0.98
MECP2-213ENST00000622433 GPATCH8Q9UKJ3 1502 aaKnown RBP21.17■□□□□ 0.98
MECP2-213ENST00000622433 CDC42BPBQ9Y5S2 1711 aa21.17■□□□□ 0.98
MECP2-213ENST00000622433 CCNB3Q8WWL7 1395 aa21.16■□□□□ 0.98
MECP2-213ENST00000622433 ITSN2Q9NZM3 1697 aa21.12■□□□□ 0.97
MECP2-213ENST00000622433 ADGRL1O94910 1474 aa21.11■□□□□ 0.97
MECP2-213ENST00000622433 DENND4BO75064 1496 aaPredicted RBP21.09■□□□□ 0.97
MECP2-213ENST00000622433 FRMPD1Q5SYB0 1578 aa21.07■□□□□ 0.96
MECP2-213ENST00000622433 SCAPERQ9BY12 1400 aa21.07■□□□□ 0.96
MECP2-213ENST00000622433 CFDP1Q9UEE9 299 aaPredicted RBP21.07■□□□□ 0.96
MECP2-213ENST00000622433 ABCC1P33527 1531 aa21.07■□□□□ 0.96
MECP2-213ENST00000622433 SAMD9LQ8IVG5 1584 aa21.06■□□□□ 0.96
MECP2-213ENST00000622433 RICTORQ6R327 1708 aa21.05■□□□□ 0.96
MECP2-213ENST00000622433 POGZQ7Z3K3 1410 aa21.04■□□□□ 0.96
MECP2-213ENST00000622433 PLEKHH2Q8IVE3 1493 aa21.04■□□□□ 0.96
MECP2-213ENST00000622433 RAPGEF3O95398 923 aa21.03■□□□□ 0.96
MECP2-213ENST00000622433 MYOM3Q5VTT5 1437 aa21.03■□□□□ 0.96
MECP2-213ENST00000622433 KIAA1107Q9UPP5 1409 aa21.03■□□□□ 0.96
MECP2-213ENST00000622433 ZMYM4Q5VZL5 1548 aa21.02■□□□□ 0.96
MECP2-213ENST00000622433 ARHGEF12Q9NZN5 1544 aa21.01■□□□□ 0.95
MECP2-213ENST00000622433 MIA2Q96PC5 1412 aa21.01■□□□□ 0.95
MECP2-213ENST00000622433 ZNF518AQ6AHZ1 1483 aa21.01■□□□□ 0.95
MECP2-213ENST00000622433 ZNF777Q9ULD5 760 aaPredicted RBP21■□□□□ 0.95
MECP2-213ENST00000622433 SYCP2Q9BX26 1530 aa20.99■□□□□ 0.95
MECP2-213ENST00000622433 KDM5CP41229 1560 aa20.98■□□□□ 0.95
MECP2-213ENST00000622433 MAGI2Q86UL8 1455 aa20.97■□□□□ 0.95
MECP2-213ENST00000622433 CAMSAP2Q08AD1 1489 aa20.96■□□□□ 0.95
MECP2-213ENST00000622433 TRAPPC8Q9Y2L5 1435 aa20.95■□□□□ 0.95
MECP2-213ENST00000622433 ZNF644Q9H582 1327 aaPredicted RBP20.95■□□□□ 0.94
MECP2-213ENST00000622433 MBD5Q9P267 1494 aa20.94■□□□□ 0.94
MECP2-213ENST00000622433 FGD6Q6ZV73 1430 aa20.93■□□□□ 0.94
MECP2-213ENST00000622433 ARHGEF40Q8TER5 1519 aa20.93■□□□□ 0.94
MECP2-213ENST00000622433 HNRNPMP52272 730 aaKnown RBP eCLIP20.92■□□□□ 0.942e-6■■■□□ 18.1
MECP2-213ENST00000622433 AFAP1Q8N556 730 aa20.92■□□□□ 0.94
MECP2-213ENST00000622433 ZFYVE16Q7Z3T8 1539 aa20.91■□□□□ 0.94
MECP2-213ENST00000622433 MLH3Q9UHC1 1453 aa20.91■□□□□ 0.94
MECP2-213ENST00000622433 HECW2Q9P2P5 1572 aa20.9■□□□□ 0.94
MECP2-213ENST00000622433 ARHGEF5Q12774 1597 aa20.89■□□□□ 0.94
MECP2-213ENST00000622433 TCOF1Q13428 1488 aaKnown RBP20.89■□□□□ 0.94
MECP2-213ENST00000622433 PTPN23Q9H3S7 1636 aa20.89■□□□□ 0.93
MECP2-213ENST00000622433 RSPH4AQ5TD94 716 aa20.88■□□□□ 0.93
MECP2-213ENST00000622433 CCDC141Q6ZP82 1450 aa20.88■□□□□ 0.93
MECP2-213ENST00000622433 YEATS2Q9ULM3 1422 aa20.87■□□□□ 0.93
MECP2-213ENST00000622433 INO80Q9ULG1 1556 aaPredicted RBP20.85■□□□□ 0.93
MECP2-213ENST00000622433 SPAG9O60271 1321 aaKnown RBP20.84■□□□□ 0.93
MECP2-213ENST00000622433 PPARGC1BQ86YN6 1023 aaKnown RBP20.84■□□□□ 0.93
MECP2-213ENST00000622433 KIDINS220Q9ULH0 1771 aa20.84■□□□□ 0.93
MECP2-213ENST00000622433 DIP2CQ9Y2E4 1556 aa20.83■□□□□ 0.92
MECP2-213ENST00000622433 ATP7AQ04656 1500 aa20.83■□□□□ 0.92
MECP2-213ENST00000622433 ATP10AO60312 1499 aa20.82■□□□□ 0.92
MECP2-213ENST00000622433 RTEL1-TNFRSF6BF6WH68 1400 aa20.82■□□□□ 0.92
MECP2-213ENST00000622433 ABCA6Q8N139 1617 aa20.82■□□□□ 0.92
MECP2-213ENST00000622433 REREQ9P2R6 1566 aa20.8■□□□□ 0.92
MECP2-213ENST00000622433 C9orf84Q5VXU9 1444 aa20.8■□□□□ 0.92
MECP2-213ENST00000622433 MAST1Q9Y2H9 1570 aa20.79■□□□□ 0.92
MECP2-213ENST00000622433 MYT1LQ9UL68 1186 aa20.78■□□□□ 0.92
MECP2-213ENST00000622433 DNMT1P26358 1616 aaKnown RBP20.78■□□□□ 0.92
MECP2-213ENST00000622433 SHANK2Q9UPX8 1470 aa20.76■□□□□ 0.91
MECP2-213ENST00000622433 TSPY4P0CV99 314 aa20.76■□□□□ 0.91
MECP2-213ENST00000622433 TSPY10P0CW01 314 aa20.76■□□□□ 0.91
MECP2-213ENST00000622433 ABCC5O15440 1437 aa20.76■□□□□ 0.91
MECP2-213ENST00000622433 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.75■□□□□ 0.91
MECP2-213ENST00000622433 CROCC2H7BZ55 1655 aa20.75■□□□□ 0.91
MECP2-213ENST00000622433 DAPK1P53355 1430 aa20.75■□□□□ 0.91
MECP2-213ENST00000622433 RRBP1Q9P2E9 1410 aaKnown RBP20.74■□□□□ 0.91
MECP2-213ENST00000622433 FAM50AQ14320 339 aaKnown RBP20.73■□□□□ 0.91
MECP2-213ENST00000622433 SIGLEC1Q9BZZ2 1709 aa20.73■□□□□ 0.91
MECP2-213ENST00000622433 ADGBQ8N7X0 1667 aa20.72■□□□□ 0.91
MECP2-213ENST00000622433 AGLP35573 1532 aa20.72■□□□□ 0.91
MECP2-213ENST00000622433 A2MP01023 1474 aa20.7■□□□□ 0.9
MECP2-213ENST00000622433 PLXNC1O60486 1568 aa20.7■□□□□ 0.9
MECP2-213ENST00000622433 BCORL1Q5H9F3 1711 aa20.69■□□□□ 0.9
MECP2-213ENST00000622433 ARID4BQ4LE39 1312 aaPredicted RBP20.68■□□□□ 0.9
MECP2-213ENST00000622433 DHX29Q7Z478 1369 aaKnown RBP20.66■□□□□ 0.9
MECP2-213ENST00000622433 ADAMTSL3P82987 1691 aa20.65■□□□□ 0.9
MECP2-213ENST00000622433 ADGRL2O95490 1459 aa20.65■□□□□ 0.9
MECP2-213ENST00000622433 KDM4FA0A1W2PPD8 638 aa20.65■□□□□ 0.9
MECP2-213ENST00000622433 ANKRD30AQ9BXX3 1397 aa20.62■□□□□ 0.89
MECP2-213ENST00000622433 DUOX2Q9NRD8 1548 aa20.61■□□□□ 0.89
MECP2-213ENST00000622433 PTPRKQ15262 1439 aa20.61■□□□□ 0.89
MECP2-213ENST00000622433 NCOA1Q15788 1441 aa20.61■□□□□ 0.89
MECP2-213ENST00000622433 KIF15Q9NS87 1388 aa20.59■□□□□ 0.89
MECP2-213ENST00000622433 EIF2AK4Q9P2K8 1649 aaKnown RBP20.58■□□□□ 0.89
MECP2-213ENST00000622433 CHIC2Q9UKJ5 165 aa20.58■□□□□ 0.89
MECP2-213ENST00000622433 ROCK1Q13464 1354 aa20.58■□□□□ 0.88
MECP2-213ENST00000622433 MADDQ8WXG6 1647 aa20.57■□□□□ 0.88
MECP2-213ENST00000622433 ERBINQ96RT1 1412 aa20.56■□□□□ 0.88
MECP2-213ENST00000622433 MLECQ14165 292 aa20.56■□□□□ 0.88
MECP2-213ENST00000622433 RRP7BPQ9NSQ0 103 aa20.55■□□□□ 0.88
MECP2-213ENST00000622433 FER1L4A9Z1Z3 1794 aa20.54■□□□□ 0.88
MECP2-213ENST00000622433 RNF17Q9BXT8 1623 aaKnown RBP20.53■□□□□ 0.88
MECP2-213ENST00000622433 KIF3BO15066 747 aa20.52■□□□□ 0.88
MECP2-213ENST00000622433 ITGAEP38570 1179 aa20.52■□□□□ 0.88
MECP2-213ENST00000622433 PPP6R1Q9UPN7 881 aa20.52■□□□□ 0.88
MECP2-213ENST00000622433 FAM135AQ9P2D6 1515 aa20.52■□□□□ 0.87
MECP2-213ENST00000622433 RIMS1Q86UR5 1692 aaKnown RBP20.51■□□□□ 0.87
MECP2-213ENST00000622433 CNTLNQ9NXG0 1405 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms