RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 ZMYM4Q5VZL5 1548 aa28.86■■■□□ 2.21
SCAMP4-213ENST00000621748 CDC42BPBQ9Y5S2 1711 aa28.86■■■□□ 2.21
SCAMP4-213ENST00000621748 POGZQ7Z3K3 1410 aa28.86■■■□□ 2.21
SCAMP4-213ENST00000621748 ARHGEF40Q8TER5 1519 aa28.85■■■□□ 2.21
SCAMP4-213ENST00000621748 YEATS2Q9ULM3 1422 aa28.81■■■□□ 2.2
SCAMP4-213ENST00000621748 PREX2Q70Z35 1606 aa28.8■■■□□ 2.2
SCAMP4-213ENST00000621748 ARID4BQ4LE39 1312 aaPredicted RBP28.8■■■□□ 2.2
SCAMP4-213ENST00000621748 ZFYVE16Q7Z3T8 1539 aa28.79■■■□□ 2.2
SCAMP4-213ENST00000621748 MAGI2Q86UL8 1455 aa28.79■■■□□ 2.2
SCAMP4-213ENST00000621748 CDC42BPAQ5VT25 1732 aa28.77■■■□□ 2.2
SCAMP4-213ENST00000621748 ADAMTSL3P82987 1691 aa28.77■■■□□ 2.2
SCAMP4-213ENST00000621748 BCORL1Q5H9F3 1711 aa28.75■■■□□ 2.19
SCAMP4-213ENST00000621748 AFAP1Q8N556 730 aa28.75■■■□□ 2.19
SCAMP4-213ENST00000621748 ZNF518AQ6AHZ1 1483 aa28.72■■■□□ 2.19
SCAMP4-213ENST00000621748 SIGLEC1Q9BZZ2 1709 aa28.72■■■□□ 2.19
SCAMP4-213ENST00000621748 MTUS2Q5JR59 1369 aa28.72■■■□□ 2.19
SCAMP4-213ENST00000621748 ARHGEF12Q9NZN5 1544 aa28.7■■■□□ 2.19
SCAMP4-213ENST00000621748 GPATCH8Q9UKJ3 1502 aaKnown RBP28.7■■■□□ 2.19
SCAMP4-213ENST00000621748 KDM5CP41229 1560 aa28.69■■■□□ 2.18
SCAMP4-213ENST00000621748 ABCC1P33527 1531 aa28.69■■■□□ 2.18
SCAMP4-213ENST00000621748 TRAPPC8Q9Y2L5 1435 aa28.67■■■□□ 2.18
SCAMP4-213ENST00000621748 ATP10AO60312 1499 aa28.66■■■□□ 2.18
SCAMP4-213ENST00000621748 PTPRMP28827 1452 aa28.66■■■□□ 2.18
SCAMP4-213ENST00000621748 MADDQ8WXG6 1647 aa28.66■■■□□ 2.18
SCAMP4-213ENST00000621748 ZNF777Q9ULD5 760 aaPredicted RBP28.66■■■□□ 2.18
SCAMP4-213ENST00000621748 ITSN2Q9NZM3 1697 aa28.64■■■□□ 2.18
SCAMP4-213ENST00000621748 CCNB3Q8WWL7 1395 aa28.63■■■□□ 2.17
SCAMP4-213ENST00000621748 MYT1LQ9UL68 1186 aa28.62■■■□□ 2.17
SCAMP4-213ENST00000621748 SAMD9LQ8IVG5 1584 aa28.62■■■□□ 2.17
SCAMP4-213ENST00000621748 EHBP1L1Q8N3D4 1523 aa28.61■■■□□ 2.17
SCAMP4-213ENST00000621748 HECW2Q9P2P5 1572 aa28.61■■■□□ 2.17
SCAMP4-213ENST00000621748 C9orf84Q5VXU9 1444 aa28.6■■■□□ 2.17
SCAMP4-213ENST00000621748 VPS8Q8N3P4 1428 aa28.6■■■□□ 2.17
SCAMP4-213ENST00000621748 CFDP1Q9UEE9 299 aaPredicted RBP28.6■■■□□ 2.17
SCAMP4-213ENST00000621748 MLH3Q9UHC1 1453 aa28.59■■■□□ 2.17
SCAMP4-213ENST00000621748 MLECQ14165 292 aa28.59■■■□□ 2.17
SCAMP4-213ENST00000621748 HNRNPMP52272 730 aaKnown RBP eCLIP28.57■■■□□ 2.16
SCAMP4-213ENST00000621748 RIMS1Q86UR5 1692 aaKnown RBP28.57■■■□□ 2.16
SCAMP4-213ENST00000621748 DIP2CQ9Y2E4 1556 aa28.56■■■□□ 2.16
SCAMP4-213ENST00000621748 TIAM1Q13009 1591 aa28.55■■■□□ 2.16
SCAMP4-213ENST00000621748 SYCP2Q9BX26 1530 aa28.55■■■□□ 2.16
SCAMP4-213ENST00000621748 ABCA6Q8N139 1617 aa28.54■■■□□ 2.16
SCAMP4-213ENST00000621748 KIDINS220Q9ULH0 1771 aa28.52■■■□□ 2.16
SCAMP4-213ENST00000621748 KIAA1107Q9UPP5 1409 aa28.52■■■□□ 2.16
SCAMP4-213ENST00000621748 ZNF644Q9H582 1327 aaPredicted RBP28.5■■■□□ 2.15
SCAMP4-213ENST00000621748 PLEKHH2Q8IVE3 1493 aa28.49■■■□□ 2.15
SCAMP4-213ENST00000621748 FER1L4A9Z1Z3 1794 aa28.48■■■□□ 2.15
SCAMP4-213ENST00000621748 REREQ9P2R6 1566 aa28.48■■■□□ 2.15
SCAMP4-213ENST00000621748 NCOA2Q15596 1464 aa28.47■■■□□ 2.15
SCAMP4-213ENST00000621748 SUPT6HQ7KZ85 1726 aaKnown RBP28.47■■■□□ 2.15
SCAMP4-213ENST00000621748 SPAG9O60271 1321 aaKnown RBP28.45■■■□□ 2.15
SCAMP4-213ENST00000621748 PLPPR3Q6T4P5 718 aa28.45■■■□□ 2.14
SCAMP4-213ENST00000621748 LRRC9Q6ZRR7 1453 aa28.43■■■□□ 2.14
SCAMP4-213ENST00000621748 KANK4Q5T7N3 995 aaPredicted RBP28.41■■■□□ 2.14
SCAMP4-213ENST00000621748 AGLP35573 1532 aa28.4■■■□□ 2.14
SCAMP4-213ENST00000621748 MBD5Q9P267 1494 aa28.4■■■□□ 2.14
SCAMP4-213ENST00000621748 MAP3K1Q13233 1512 aa28.39■■■□□ 2.14
SCAMP4-213ENST00000621748 ATP7AQ04656 1500 aa28.38■■■□□ 2.13
SCAMP4-213ENST00000621748 INO80Q9ULG1 1556 aaPredicted RBP28.37■■■□□ 2.13
SCAMP4-213ENST00000621748 CEBPAP49715 358 aaPredicted RBP28.34■■■□□ 2.13
SCAMP4-213ENST00000621748 LMTK3Q96Q04 1460 aa28.34■■■□□ 2.13
SCAMP4-213ENST00000621748 CAMSAP2Q08AD1 1489 aa28.32■■■□□ 2.12
SCAMP4-213ENST00000621748 A2MP01023 1474 aa28.27■■■□□ 2.12
SCAMP4-213ENST00000621748 PLXNC1O60486 1568 aa28.26■■■□□ 2.11
SCAMP4-213ENST00000621748 RTEL1-TNFRSF6BF6WH68 1400 aa28.26■■■□□ 2.11
SCAMP4-213ENST00000621748 CCDC141Q6ZP82 1450 aa28.24■■■□□ 2.11
SCAMP4-213ENST00000621748 APLP2Q06481 763 aa28.24■■■□□ 2.11
SCAMP4-213ENST00000621748 RSPH4AQ5TD94 716 aa28.24■■■□□ 2.11
SCAMP4-213ENST00000621748 HSPA2P54652 639 aa28.23■■■□□ 2.11
SCAMP4-213ENST00000621748 ESF1Q9H501 851 aaKnown RBP28.23■■■□□ 2.11
SCAMP4-213ENST00000621748 ADGBQ8N7X0 1667 aa28.23■■■□□ 2.11
SCAMP4-213ENST00000621748 C3P01024 1663 aa28.2■■■□□ 2.11
SCAMP4-213ENST00000621748 MYOM3Q5VTT5 1437 aa28.19■■■□□ 2.1
SCAMP4-213ENST00000621748 SETD1BQ9UPS6 1966 aaKnown RBP28.19■■■□□ 2.1
SCAMP4-213ENST00000621748 ARHGEF5Q12774 1597 aa28.19■■■□□ 2.1
SCAMP4-213ENST00000621748 CNTLNQ9NXG0 1405 aa28.18■■■□□ 2.1
SCAMP4-213ENST00000621748 GGT6Q6P531 493 aa28.16■■■□□ 2.1
SCAMP4-213ENST00000621748 MIA2Q96PC5 1412 aa28.16■■■□□ 2.1
SCAMP4-213ENST00000621748 PREX1Q8TCU6 1659 aa28.16■■■□□ 2.1
SCAMP4-213ENST00000621748 DHX29Q7Z478 1369 aaKnown RBP28.15■■■□□ 2.1
SCAMP4-213ENST00000621748 TSPY4P0CV99 314 aa28.14■■■□□ 2.1
SCAMP4-213ENST00000621748 TSPY10P0CW01 314 aa28.14■■■□□ 2.1
SCAMP4-213ENST00000621748 ZMYM3Q14202 1370 aa28.11■■■□□ 2.09
SCAMP4-213ENST00000621748 MROH2AA6NES4 1674 aa28.1■■■□□ 2.09
SCAMP4-213ENST00000621748 CLTCQ00610 1675 aaKnown RBP28.1■■■□□ 2.09
SCAMP4-213ENST00000621748 UHRF1BP1Q6BDS2 1440 aa28.07■■■□□ 2.08
SCAMP4-213ENST00000621748 KIF3BO15066 747 aa28.06■■■□□ 2.08
SCAMP4-213ENST00000621748 PPP6R1Q9UPN7 881 aa28.06■■■□□ 2.08
SCAMP4-213ENST00000621748 MAST1Q9Y2H9 1570 aa28.05■■■□□ 2.08
SCAMP4-213ENST00000621748 PTPN23Q9H3S7 1636 aa28.02■■■□□ 2.08
SCAMP4-213ENST00000621748 NPATQ14207 1427 aa28.01■■■□□ 2.07
SCAMP4-213ENST00000621748 FGD6Q6ZV73 1430 aa27.99■■■□□ 2.07
SCAMP4-213ENST00000621748 ILDR1Q86SU0 546 aaPredicted RBP27.97■■■□□ 2.07
SCAMP4-213ENST00000621748 ABCC5O15440 1437 aa27.96■■■□□ 2.07
SCAMP4-213ENST00000621748 PTPRKQ15262 1439 aa27.96■■■□□ 2.07
SCAMP4-213ENST00000621748 STRCQ7RTU9 1775 aa27.95■■■□□ 2.06
SCAMP4-213ENST00000621748 TCOF1Q13428 1488 aaKnown RBP27.95■■■□□ 2.06
SCAMP4-213ENST00000621748 CROCC2H7BZ55 1655 aa27.91■■■□□ 2.06
SCAMP4-213ENST00000621748 WASHC2CQ9Y4E1 1318 aa27.91■■■□□ 2.06
SCAMP4-213ENST00000621748 KDM5DQ9BY66 1539 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms